RNA–Protein interactions for RNA: ENST00000494675.5

LRIF1-203, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-203ENST00000494675 REC114Q7Z4M0 266 aa4.34□□□□□ -1.71
LRIF1-203ENST00000494675 ATG4DQ86TL0 474 aaPredicted RBP4.34□□□□□ -1.71
LRIF1-203ENST00000494675 KSR1Q8IVT5 923 aa4.34□□□□□ -1.71
LRIF1-203ENST00000494675 RASGRP4Q8TDF6 673 aa4.34□□□□□ -1.71
LRIF1-203ENST00000494675 SREK1Q8WXA9 508 aaKnown RBP4.34□□□□□ -1.71
LRIF1-203ENST00000494675 PLPPR2Q96GM1 343 aa4.34□□□□□ -1.71
LRIF1-203ENST00000494675 HRASLS5Q96KN8 279 aa4.34□□□□□ -1.71
LRIF1-203ENST00000494675 TANGO6Q9C0B7 1094 aa4.34□□□□□ -1.71
LRIF1-203ENST00000494675 MKNK2Q9HBH9 465 aa4.34□□□□□ -1.71
LRIF1-203ENST00000494675 PPP1R1BQ9UD71 204 aaPredicted RBP4.34□□□□□ -1.71
LRIF1-203ENST00000494675 EFR3BQ9Y2G0 817 aa4.34□□□□□ -1.71
LRIF1-203ENST00000494675 CSADQ9Y600 493 aa4.34□□□□□ -1.71
LRIF1-203ENST00000494675 SNCAIPQ9Y6H5 919 aa4.34□□□□□ -1.71
LRIF1-203ENST00000494675 HCLS1P14317 486 aaPredicted RBP4.33□□□□□ -1.72
LRIF1-203ENST00000494675 ATF4P18848 351 aaPredicted RBP4.33□□□□□ -1.72
LRIF1-203ENST00000494675 CDK8P49336 464 aa4.33□□□□□ -1.72
LRIF1-203ENST00000494675 LRFN4Q6PJG9 635 aa4.33□□□□□ -1.72
LRIF1-203ENST00000494675 C12orf40Q86WS4 652 aa4.33□□□□□ -1.72
LRIF1-203ENST00000494675 SLITRK4Q8IW52 837 aa4.33□□□□□ -1.72
LRIF1-203ENST00000494675 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.33□□□□□ -1.72
LRIF1-203ENST00000494675 SEC16BQ96JE7 1060 aa4.33□□□□□ -1.72
LRIF1-203ENST00000494675 SLC38A3Q99624 504 aa4.33□□□□□ -1.72
LRIF1-203ENST00000494675 LRRC3Q9BY71 257 aa4.33□□□□□ -1.72
LRIF1-203ENST00000494675 BRMS1Q9HCU9 246 aa4.33□□□□□ -1.72
LRIF1-203ENST00000494675 USP35Q9P2H5 1018 aa4.33□□□□□ -1.72
LRIF1-203ENST00000494675 PRAMEF27A3QJZ7 478 aa4.33□□□□□ -1.72
LRIF1-203ENST00000494675 GRIN3BO60391 1043 aa4.33□□□□□ -1.72
LRIF1-203ENST00000494675 CD8BP10966 210 aa4.33□□□□□ -1.72
LRIF1-203ENST00000494675 NASPP49321 788 aaPredicted RBP4.33□□□□□ -1.72
LRIF1-203ENST00000494675 ZNF165P49910 485 aa4.33□□□□□ -1.72
LRIF1-203ENST00000494675 COL9A2Q14055 689 aaPredicted RBP4.33□□□□□ -1.72
LRIF1-203ENST00000494675 AOC3Q16853 763 aa4.33□□□□□ -1.72
LRIF1-203ENST00000494675 PLD6Q8N2A8 252 aaKnown RBP4.33□□□□□ -1.72
LRIF1-203ENST00000494675 FAM181AQ8N9Y4 354 aa4.33□□□□□ -1.72
LRIF1-203ENST00000494675 CPLX3Q8WVH0 158 aa4.33□□□□□ -1.72
LRIF1-203ENST00000494675 TMEM40Q8WWA1 233 aa4.33□□□□□ -1.72
LRIF1-203ENST00000494675 FAM168AQ92567 244 aa4.33□□□□□ -1.72
LRIF1-203ENST00000494675 ISL2Q96A47 359 aa4.33□□□□□ -1.72
LRIF1-203ENST00000494675 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.33□□□□□ -1.72
LRIF1-203ENST00000494675 GINM1Q9NU53 330 aa4.33□□□□□ -1.72
LRIF1-203ENST00000494675 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.33□□□□□ -1.72
LRIF1-203ENST00000494675 GFRA2O00451 464 aa4.32□□□□□ -1.72
LRIF1-203ENST00000494675 NEFMP07197 916 aa4.32□□□□□ -1.72
LRIF1-203ENST00000494675 ATP2B1P20020 1258 aa4.32□□□□□ -1.72
LRIF1-203ENST00000494675 PPM1JQ5JR12 505 aa4.32□□□□□ -1.72
LRIF1-203ENST00000494675 ANGEL2Q5VTE6 544 aaKnown RBP4.32□□□□□ -1.72
LRIF1-203ENST00000494675 FBXW10Q5XX13 1052 aa4.32□□□□□ -1.72
LRIF1-203ENST00000494675 GK5Q6ZS86 529 aa4.32□□□□□ -1.72
LRIF1-203ENST00000494675 CDC37L1Q7L3B6 337 aa4.32□□□□□ -1.72
LRIF1-203ENST00000494675 KCT2Q8NC54 265 aa4.32□□□□□ -1.72
LRIF1-203ENST00000494675 DRC1Q96MC2 740 aa4.32□□□□□ -1.72
LRIF1-203ENST00000494675 GMLQ99445 158 aa4.32□□□□□ -1.72
LRIF1-203ENST00000494675 SNX11Q9Y5W9 270 aa4.32□□□□□ -1.72
LRIF1-203ENST00000494675 CARMIL2Q6F5E8 1435 aa4.31□□□□□ -1.72
LRIF1-203ENST00000494675 FANCGO15287 622 aa4.31□□□□□ -1.72
LRIF1-203ENST00000494675 SSBP05455 408 aaKnown RBP eCLIP4.31□□□□□ -1.72
LRIF1-203ENST00000494675 SOX9P48436 509 aa4.31□□□□□ -1.72
LRIF1-203ENST00000494675 ETF1P62495 437 aaKnown RBP4.31□□□□□ -1.72
LRIF1-203ENST00000494675 PDE4BQ07343 736 aa4.31□□□□□ -1.72
LRIF1-203ENST00000494675 REXO1Q8N1G1 1221 aaKnown RBP4.31□□□□□ -1.72
LRIF1-203ENST00000494675 TOP6BLQ8N6T0 577 aa4.31□□□□□ -1.72
LRIF1-203ENST00000494675 ZNF507Q8TCN5 953 aa4.31□□□□□ -1.72
LRIF1-203ENST00000494675 FERD3LQ96RJ6 166 aa4.31□□□□□ -1.72
LRIF1-203ENST00000494675 MBNL3Q9NUK0 354 aaKnown RBP4.31□□□□□ -1.72
LRIF1-203ENST00000494675 GTF2IRD1Q9UHL9 959 aa4.31□□□□□ -1.72
LRIF1-203ENST00000494675 PCDHB14Q9Y5E9 798 aa4.31□□□□□ -1.72
LRIF1-203ENST00000494675 LEFTY1O75610 366 aa4.31□□□□□ -1.72
LRIF1-203ENST00000494675 CEACAM5P06731 702 aa4.31□□□□□ -1.72
LRIF1-203ENST00000494675 RNASE1P07998 156 aaKnown RBP4.31□□□□□ -1.72
LRIF1-203ENST00000494675 OXCT1P55809 520 aa4.31□□□□□ -1.72
LRIF1-203ENST00000494675 CYFIP1Q7L576 1253 aa4.31□□□□□ -1.72
LRIF1-203ENST00000494675 CRBNQ96SW2 442 aa4.31□□□□□ -1.72
LRIF1-203ENST00000494675 FAM53CQ9NYF3 392 aa4.31□□□□□ -1.72
LRIF1-203ENST00000494675 PPT2Q9UMR5 302 aa4.31□□□□□ -1.72
LRIF1-203ENST00000494675 POLR3KQ9Y2Y1 108 aaPredicted RBP4.31□□□□□ -1.72
LRIF1-203ENST00000494675 HTR3BO95264 441 aa4.3□□□□□ -1.72
LRIF1-203ENST00000494675 PGRP06401 933 aa4.3□□□□□ -1.72
LRIF1-203ENST00000494675 FGRP09769 529 aa4.3□□□□□ -1.72
LRIF1-203ENST00000494675 PLCG1P19174 1290 aa4.3□□□□□ -1.72
LRIF1-203ENST00000494675 GRK4P32298 578 aa4.3□□□□□ -1.72
LRIF1-203ENST00000494675 GTF2F1P35269 517 aaKnown RBP eCLIP4.3□□□□□ -1.72
LRIF1-203ENST00000494675 CLCQ05315 142 aa4.3□□□□□ -1.72
LRIF1-203ENST00000494675 RING1Q06587 406 aa4.3□□□□□ -1.72
LRIF1-203ENST00000494675 MLECQ14165 292 aa4.3□□□□□ -1.72
LRIF1-203ENST00000494675 ZBTB37Q5TC79 503 aa4.3□□□□□ -1.72
LRIF1-203ENST00000494675 CCDC81Q6ZN84 652 aa4.3□□□□□ -1.72
LRIF1-203ENST00000494675 MCF2L2Q86YR7 1114 aa4.3□□□□□ -1.72
LRIF1-203ENST00000494675 DUSP23Q9BVJ7 150 aa4.3□□□□□ -1.72
LRIF1-203ENST00000494675 WNT10AQ9GZT5 417 aa4.3□□□□□ -1.72
LRIF1-203ENST00000494675 STRIP2Q9ULQ0 834 aa4.3□□□□□ -1.72
LRIF1-203ENST00000494675 CORINQ9Y5Q5 1042 aa4.3□□□□□ -1.72
LRIF1-203ENST00000494675 TACC3Q9Y6A5 838 aa4.3□□□□□ -1.72
LRIF1-203ENST00000494675 IMPDH2P12268 514 aa4.29□□□□□ -1.72
LRIF1-203ENST00000494675 ITIH2P19823 946 aa4.29□□□□□ -1.72
LRIF1-203ENST00000494675 SLC23A3Q6PIS1 610 aa4.29□□□□□ -1.72
LRIF1-203ENST00000494675 LRRN4CLQ8ND94 238 aa4.29□□□□□ -1.72
LRIF1-203ENST00000494675 ASB11Q8WXH4 323 aa4.29□□□□□ -1.72
LRIF1-203ENST00000494675 FAM84AQ96KN4 292 aa4.29□□□□□ -1.72
LRIF1-203ENST00000494675 SRRTQ9BXP5 876 aaKnown RBP4.29□□□□□ -1.72
LRIF1-203ENST00000494675 EHMT1Q9H9B1 1298 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms