RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 OSBP2Q969R2 916 aa15.83■□□□□ 0.12
ERCC3-209ENST00000494464 STRBPQ96SI9 672 aaKnown RBP15.83■□□□□ 0.12
ERCC3-209ENST00000494464 FEZ1Q99689 392 aa15.83■□□□□ 0.12
ERCC3-209ENST00000494464 EMILIN3Q9NT22 766 aa15.83■□□□□ 0.12
ERCC3-209ENST00000494464 MORF4L1Q9UBU8 362 aa15.83■□□□□ 0.12
ERCC3-209ENST00000494464 GREB1LQ9C091 1923 aaPredicted RBP15.83■□□□□ 0.12
ERCC3-209ENST00000494464 TNRC18O15417 2968 aaPredicted RBP15.82■□□□□ 0.12
ERCC3-209ENST00000494464 ROBO3Q96MS0 1386 aa15.82■□□□□ 0.12
ERCC3-209ENST00000494464 USP17L12C9JPN9 530 aa15.82■□□□□ 0.12
ERCC3-209ENST00000494464 USP17L21D6R901 530 aa15.82■□□□□ 0.12
ERCC3-209ENST00000494464 TMEM179Q6ZVK1 233 aa15.82■□□□□ 0.12
ERCC3-209ENST00000494464 C16orf86Q6ZW13 317 aa15.82■□□□□ 0.12
ERCC3-209ENST00000494464 SMC5Q8IY18 1101 aa15.82■□□□□ 0.12
ERCC3-209ENST00000494464 GTF3C2Q8WUA4 911 aaPredicted RBP15.82■□□□□ 0.12
ERCC3-209ENST00000494464 STAP2Q9UGK3 403 aa15.82■□□□□ 0.12
ERCC3-209ENST00000494464 TNPO2O14787 897 aaKnown RBP15.81■□□□□ 0.12
ERCC3-209ENST00000494464 GPAA1O43292 621 aa15.81■□□□□ 0.12
ERCC3-209ENST00000494464 ECM2O94769 699 aaPredicted RBP15.81■□□□□ 0.12
ERCC3-209ENST00000494464 GNAT2P19087 354 aa15.81■□□□□ 0.12
ERCC3-209ENST00000494464 HERVK_113P62684 666 aa15.81■□□□□ 0.12
ERCC3-209ENST00000494464 PRKCZQ05513 592 aa15.81■□□□□ 0.12
ERCC3-209ENST00000494464 SEPT2Q15019 361 aa15.81■□□□□ 0.12
ERCC3-209ENST00000494464 SBK1Q52WX2 424 aa15.81■□□□□ 0.12
ERCC3-209ENST00000494464 CTR9Q6PD62 1173 aa15.81■□□□□ 0.12
ERCC3-209ENST00000494464 RAET1EQ8TD07 263 aa15.81■□□□□ 0.12
ERCC3-209ENST00000494464 DYNLL2Q96FJ2 89 aa15.81■□□□□ 0.12
ERCC3-209ENST00000494464 CCDC17Q96LX7 622 aa15.81■□□□□ 0.12
ERCC3-209ENST00000494464 A0A0G2JMZ2 1700 aa15.8■□□□□ 0.12
ERCC3-209ENST00000494464 CYP2D7A0A087X1C5 515 aa15.8■□□□□ 0.12
ERCC3-209ENST00000494464 GSG1L2A8MUP6 293 aa15.8■□□□□ 0.12
ERCC3-209ENST00000494464 CDK8P49336 464 aa15.8■□□□□ 0.12
ERCC3-209ENST00000494464 ACER1Q8TDN7 264 aa15.8■□□□□ 0.12
ERCC3-209ENST00000494464 SH3TC2Q8TF17 1288 aa15.8■□□□□ 0.12
ERCC3-209ENST00000494464 FSD1Q9BTV5 496 aa15.8■□□□□ 0.12
ERCC3-209ENST00000494464 RWDD1Q9H446 243 aaPredicted RBP15.8■□□□□ 0.12
ERCC3-209ENST00000494464 PLXNB2O15031 1838 aa15.79■□□□□ 0.12
ERCC3-209ENST00000494464 POTEFA5A3E0 1075 aa15.79■□□□□ 0.12
ERCC3-209ENST00000494464 M0R2C6 588 aa15.79■□□□□ 0.12
ERCC3-209ENST00000494464 MPHOSPH10O00566 681 aaKnown RBP15.79■□□□□ 0.12
ERCC3-209ENST00000494464 VCAM1P19320 739 aa15.79■□□□□ 0.12
ERCC3-209ENST00000494464 GRK4P32298 578 aa15.79■□□□□ 0.12
ERCC3-209ENST00000494464 PDE1AP54750 535 aa15.79■□□□□ 0.12
ERCC3-209ENST00000494464 IRF5Q13568 498 aa15.79■□□□□ 0.12
ERCC3-209ENST00000494464 ZYXQ15942 572 aaKnown RBP15.79■□□□□ 0.12
ERCC3-209ENST00000494464 ZMYM1Q5SVZ6 1142 aa15.79■□□□□ 0.12
ERCC3-209ENST00000494464 SLAIN1Q8ND83 568 aa15.79■□□□□ 0.12
ERCC3-209ENST00000494464 COA7Q96BR5 231 aa15.79■□□□□ 0.12
ERCC3-209ENST00000494464 P2RX7Q99572 595 aaKnown RBP15.79■□□□□ 0.12
ERCC3-209ENST00000494464 EPB41L4AQ9HCS5 686 aaPredicted RBP15.79■□□□□ 0.12
ERCC3-209ENST00000494464 GABRQQ9UN88 632 aa15.79■□□□□ 0.12
ERCC3-209ENST00000494464 USP17L15C9J2P7 530 aa15.78■□□□□ 0.12
ERCC3-209ENST00000494464 USP17L13C9JLJ4 530 aa15.78■□□□□ 0.12
ERCC3-209ENST00000494464 USP17L11C9JVI0 530 aa15.78■□□□□ 0.12
ERCC3-209ENST00000494464 USP17L18D6R9N7 530 aa15.78■□□□□ 0.12
ERCC3-209ENST00000494464 USP17L22D6RA61 530 aa15.78■□□□□ 0.12
ERCC3-209ENST00000494464 USP17L17D6RBQ6 530 aa15.78■□□□□ 0.12
ERCC3-209ENST00000494464 USP17L19D6RCP7 530 aa15.78■□□□□ 0.12
ERCC3-209ENST00000494464 USP17L20D6RJB6 530 aa15.78■□□□□ 0.12
ERCC3-209ENST00000494464 SMIM22K7EJ46 135 aa15.78■□□□□ 0.12
ERCC3-209ENST00000494464 AKR1B1P15121 316 aa15.78■□□□□ 0.12
ERCC3-209ENST00000494464 FLT3LGP49771 235 aa15.78■□□□□ 0.12
ERCC3-209ENST00000494464 USP17L24Q0WX57 530 aa15.78■□□□□ 0.12
ERCC3-209ENST00000494464 TMEM106CQ9BVX2 250 aa15.78■□□□□ 0.12
ERCC3-209ENST00000494464 DOCK3Q8IZD9 2030 aa15.78■□□□□ 0.12
ERCC3-209ENST00000494464 PARP14Q460N5 1801 aa15.78■□□□□ 0.12
ERCC3-209ENST00000494464 A0A1W2PRG0 241 aa15.77■□□□□ 0.12
ERCC3-209ENST00000494464 ICA1Q05084 483 aa15.77■□□□□ 0.12
ERCC3-209ENST00000494464 LBX2Q6XYB7 198 aa15.77■□□□□ 0.12
ERCC3-209ENST00000494464 TICAM2Q86XR7 235 aa15.77■□□□□ 0.12
ERCC3-209ENST00000494464 EVI5LQ96CN4 794 aa15.77■□□□□ 0.12
ERCC3-209ENST00000494464 LNPKQ9C0E8 428 aa15.77■□□□□ 0.12
ERCC3-209ENST00000494464 SH2D4AQ9H788 454 aa15.77■□□□□ 0.12
ERCC3-209ENST00000494464 RLFQ13129 1914 aa15.77■□□□□ 0.12
ERCC3-209ENST00000494464 KIAA0100Q14667 2235 aaKnown RBP15.77■□□□□ 0.11
ERCC3-209ENST00000494464 ERVK-9P63128 1117 aa15.76■□□□□ 0.11
ERCC3-209ENST00000494464 ERVK-24P63145 666 aa15.76■□□□□ 0.11
ERCC3-209ENST00000494464 CATSPERGQ6ZRH7 1159 aa15.76■□□□□ 0.11
ERCC3-209ENST00000494464 GPRC5AQ8NFJ5 357 aa15.76■□□□□ 0.11
ERCC3-209ENST00000494464 PXYLP1Q8TE99 480 aa15.76■□□□□ 0.11
ERCC3-209ENST00000494464 LPAR1Q92633 364 aa15.76■□□□□ 0.11
ERCC3-209ENST00000494464 SEC62Q99442 399 aaKnown RBP15.76■□□□□ 0.11
ERCC3-209ENST00000494464 ARHGEF10LQ9HCE6 1279 aa15.76■□□□□ 0.11
ERCC3-209ENST00000494464 TXNRD2Q9NNW7 524 aa15.76■□□□□ 0.11
ERCC3-209ENST00000494464 RBPJLQ9UBG7 517 aa15.76■□□□□ 0.11
ERCC3-209ENST00000494464 PATL2C9JE40 543 aaKnown RBP15.75■□□□□ 0.11
ERCC3-209ENST00000494464 IGHDP01880 384 aa15.75■□□□□ 0.11
ERCC3-209ENST00000494464 TDO2P48775 406 aa15.75■□□□□ 0.11
ERCC3-209ENST00000494464 CLEC10AQ8IUN9 316 aa15.75■□□□□ 0.11
ERCC3-209ENST00000494464 RPAP3Q9H6T3 665 aaPredicted RBP15.75■□□□□ 0.11
ERCC3-209ENST00000494464 TMX2Q9Y320 296 aa15.75■□□□□ 0.11
ERCC3-209ENST00000494464 RABGAP1Q9Y3P9 1069 aa15.75■□□□□ 0.11
ERCC3-209ENST00000494464 MKI67P46013 3256 aaKnown RBP15.75■□□□□ 0.11
ERCC3-209ENST00000494464 ADCY3O60266 1144 aa15.75■□□□□ 0.11
ERCC3-209ENST00000494464 MAPK4P31152 587 aa15.75■□□□□ 0.11
ERCC3-209ENST00000494464 UBXN2AP68543 259 aa15.75■□□□□ 0.11
ERCC3-209ENST00000494464 NUCB1Q02818 461 aa15.75■□□□□ 0.11
ERCC3-209ENST00000494464 POTEEQ6S8J3 1075 aa15.75■□□□□ 0.11
ERCC3-209ENST00000494464 CHD1LQ86WJ1 897 aa15.75■□□□□ 0.11
ERCC3-209ENST00000494464 SIAH1Q8IUQ4 282 aa15.75■□□□□ 0.11
ERCC3-209ENST00000494464 IFNL3Q8IZI9 196 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 265.9 ms