RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 SREBF2Q12772 1141 aa10.57□□□□□ -0.72
ITGB1-217ENST00000494395 PPIL2Q13356 520 aa10.57□□□□□ -0.72
ITGB1-217ENST00000494395 SCYL3Q8IZE3 742 aa10.57□□□□□ -0.72
ITGB1-217ENST00000494395 SDR42E1Q8WUS8 393 aa10.57□□□□□ -0.72
ITGB1-217ENST00000494395 APPBP2Q92624 585 aa10.57□□□□□ -0.72
ITGB1-217ENST00000494395 AIDAQ96BJ3 306 aa10.57□□□□□ -0.72
ITGB1-217ENST00000494395 OTUD5Q96G74 571 aa10.57□□□□□ -0.72
ITGB1-217ENST00000494395 PTPN18Q99952 460 aa10.57□□□□□ -0.72
ITGB1-217ENST00000494395 CFHR5Q9BXR6 569 aa10.57□□□□□ -0.72
ITGB1-217ENST00000494395 CRNKL1Q9BZJ0 848 aaKnown RBP10.57□□□□□ -0.72
ITGB1-217ENST00000494395 EHD4Q9H223 541 aa10.57□□□□□ -0.72
ITGB1-217ENST00000494395 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.57□□□□□ -0.72
ITGB1-217ENST00000494395 DCP1AQ9NPI6 582 aaPredicted RBP10.57□□□□□ -0.72
ITGB1-217ENST00000494395 PRDM10Q9NQV6 1147 aa10.57□□□□□ -0.72
ITGB1-217ENST00000494395 SAP30BPQ9UHR5 308 aaKnown RBP10.57□□□□□ -0.72
ITGB1-217ENST00000494395 TSKSQ9UJT2 592 aa10.57□□□□□ -0.72
ITGB1-217ENST00000494395 KCNH4Q9UQ05 1017 aa10.57□□□□□ -0.72
ITGB1-217ENST00000494395 SNPHO15079 494 aa10.56□□□□□ -0.72
ITGB1-217ENST00000494395 RNF113AO15541 343 aaKnown RBP10.56□□□□□ -0.72
ITGB1-217ENST00000494395 PRKAB2O43741 272 aa10.56□□□□□ -0.72
ITGB1-217ENST00000494395 TRPA1O75762 1119 aa10.56□□□□□ -0.72
ITGB1-217ENST00000494395 PTPRAP18433 802 aa10.56□□□□□ -0.72
ITGB1-217ENST00000494395 USP5P45974 858 aa10.56□□□□□ -0.72
ITGB1-217ENST00000494395 PLCD1P51178 756 aa10.56□□□□□ -0.72
ITGB1-217ENST00000494395 LBX1P52954 281 aa10.56□□□□□ -0.72
ITGB1-217ENST00000494395 INHBEP58166 350 aa10.56□□□□□ -0.72
ITGB1-217ENST00000494395 JAG1P78504 1218 aa10.56□□□□□ -0.72
ITGB1-217ENST00000494395 GABPAQ06546 454 aa10.56□□□□□ -0.72
ITGB1-217ENST00000494395 MOGSQ13724 837 aa10.56□□□□□ -0.72
ITGB1-217ENST00000494395 ZMYM1Q5SVZ6 1142 aa10.56□□□□□ -0.72
ITGB1-217ENST00000494395 PADI6Q6TGC4 694 aa10.56□□□□□ -0.72
ITGB1-217ENST00000494395 FOXP4Q8IVH2 680 aaPredicted RBP10.56□□□□□ -0.72
ITGB1-217ENST00000494395 BRI3BPQ8WY22 251 aa10.56□□□□□ -0.72
ITGB1-217ENST00000494395 STRBPQ96SI9 672 aaKnown RBP10.56□□□□□ -0.72
ITGB1-217ENST00000494395 BEGAINQ9BUH8 593 aa10.56□□□□□ -0.72
ITGB1-217ENST00000494395 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.56□□□□□ -0.72
ITGB1-217ENST00000494395 HLA-DOAP06340 250 aa10.55□□□□□ -0.72
ITGB1-217ENST00000494395 CAP2P40123 477 aa10.55□□□□□ -0.72
ITGB1-217ENST00000494395 GTF2A2P52657 109 aa10.55□□□□□ -0.72
ITGB1-217ENST00000494395 SHROOM1Q2M3G4 852 aaPredicted RBP10.55□□□□□ -0.72
ITGB1-217ENST00000494395 COL13A1Q5TAT6 717 aaPredicted RBP10.55□□□□□ -0.72
ITGB1-217ENST00000494395 TATDN1Q6P1N9 297 aa10.55□□□□□ -0.72
ITGB1-217ENST00000494395 EVI5LQ96CN4 794 aa10.55□□□□□ -0.72
ITGB1-217ENST00000494395 DDRGK1Q96HY6 314 aa10.55□□□□□ -0.72
ITGB1-217ENST00000494395 SEC62Q99442 399 aaKnown RBP10.55□□□□□ -0.72
ITGB1-217ENST00000494395 R3HDMLQ9H3Y0 253 aa10.55□□□□□ -0.72
ITGB1-217ENST00000494395 ATP8A2Q9NTI2 1148 aa10.55□□□□□ -0.72
ITGB1-217ENST00000494395 AFG3L2Q9Y4W6 797 aa10.55□□□□□ -0.72
ITGB1-217ENST00000494395 GREB1LQ9C091 1923 aaPredicted RBP10.54□□□□□ -0.72
ITGB1-217ENST00000494395 GSG1L2A8MUP6 293 aa10.54□□□□□ -0.72
ITGB1-217ENST00000494395 SMIM22K7EJ46 135 aa10.54□□□□□ -0.72
ITGB1-217ENST00000494395 M0R2C6 588 aa10.54□□□□□ -0.72
ITGB1-217ENST00000494395 FOXP2O15409 715 aa10.54□□□□□ -0.72
ITGB1-217ENST00000494395 CYP2D6P10635 497 aa10.54□□□□□ -0.72
ITGB1-217ENST00000494395 SNAPC2Q13487 334 aa10.54□□□□□ -0.72
ITGB1-217ENST00000494395 SLC4A8Q2Y0W8 1093 aa10.54□□□□□ -0.72
ITGB1-217ENST00000494395 NOM1Q5C9Z4 860 aaKnown RBP10.54□□□□□ -0.72
ITGB1-217ENST00000494395 PPP4R3BQ5MIZ7 849 aa10.54□□□□□ -0.72
ITGB1-217ENST00000494395 TTC6Q86TZ1 520 aa10.54□□□□□ -0.72
ITGB1-217ENST00000494395 CCDC84Q86UT8 332 aaPredicted RBP10.54□□□□□ -0.72
ITGB1-217ENST00000494395 TICAM2Q86XR7 235 aa10.54□□□□□ -0.72
ITGB1-217ENST00000494395 PHOX2BQ99453 314 aa10.54□□□□□ -0.72
ITGB1-217ENST00000494395 FSD1Q9BTV5 496 aa10.54□□□□□ -0.72
ITGB1-217ENST00000494395 REPIN1Q9BWE0 567 aaKnown RBP10.54□□□□□ -0.72
ITGB1-217ENST00000494395 EPB41L4AQ9HCS5 686 aaPredicted RBP10.54□□□□□ -0.72
ITGB1-217ENST00000494395 MCM9Q9NXL9 1143 aa10.54□□□□□ -0.72
ITGB1-217ENST00000494395 SERPINB13Q9UIV8 391 aa10.54□□□□□ -0.72
ITGB1-217ENST00000494395 CCL15-CCL14A0A0B4J2E2 113 aa10.53□□□□□ -0.72
ITGB1-217ENST00000494395 A0A0G2JLL6 359 aaPredicted RBP10.53□□□□□ -0.72
ITGB1-217ENST00000494395 BTBD19C9JJ37 291 aa10.53□□□□□ -0.72
ITGB1-217ENST00000494395 CXCL11O14625 94 aa10.53□□□□□ -0.72
ITGB1-217ENST00000494395 GPAA1O43292 621 aa10.53□□□□□ -0.72
ITGB1-217ENST00000494395 TBC1D8O95759 1140 aa10.53□□□□□ -0.72
ITGB1-217ENST00000494395 ALDH1A1P00352 501 aa10.53□□□□□ -0.72
ITGB1-217ENST00000494395 CETPP11597 493 aa10.53□□□□□ -0.72
ITGB1-217ENST00000494395 SHMT1P34896 483 aa10.53□□□□□ -0.72
ITGB1-217ENST00000494395 CCL15Q16663 113 aa10.53□□□□□ -0.72
ITGB1-217ENST00000494395 LRRFIP1Q32MZ4 808 aaKnown RBP10.53□□□□□ -0.72
ITGB1-217ENST00000494395 GIMAP6Q6P9H5 292 aa10.53□□□□□ -0.72
ITGB1-217ENST00000494395 CTR9Q6PD62 1173 aa10.53□□□□□ -0.72
ITGB1-217ENST00000494395 PRRT2Q7Z6L0 340 aaPredicted RBP10.53□□□□□ -0.72
ITGB1-217ENST00000494395 FAM43AQ8N2R8 423 aa10.53□□□□□ -0.72
ITGB1-217ENST00000494395 CRACR2BQ8N4Y2 399 aaPredicted RBP10.53□□□□□ -0.72
ITGB1-217ENST00000494395 ZCCHC17Q9NP64 241 aaKnown RBP10.53□□□□□ -0.72
ITGB1-217ENST00000494395 GINM1Q9NU53 330 aa10.53□□□□□ -0.72
ITGB1-217ENST00000494395 RBM27Q9P2N5 1060 aaKnown RBP10.53□□□□□ -0.72
ITGB1-217ENST00000494395 SLC4A4Q9Y6R1 1079 aa10.53□□□□□ -0.72
ITGB1-217ENST00000494395 ZHX2Q9Y6X8 837 aa10.53□□□□□ -0.72
ITGB1-217ENST00000494395 ROBO3Q96MS0 1386 aa10.52□□□□□ -0.72
ITGB1-217ENST00000494395 CYP2D7A0A087X1C5 515 aa10.52□□□□□ -0.73
ITGB1-217ENST00000494395 USP17L12C9JPN9 530 aa10.52□□□□□ -0.73
ITGB1-217ENST00000494395 USP17L21D6R901 530 aa10.52□□□□□ -0.73
ITGB1-217ENST00000494395 GDF11O95390 407 aa10.52□□□□□ -0.73
ITGB1-217ENST00000494395 POLR3DP05423 398 aaPredicted RBP10.52□□□□□ -0.73
ITGB1-217ENST00000494395 HOXB1P14653 301 aaPredicted RBP10.52□□□□□ -0.73
ITGB1-217ENST00000494395 GSPT1P15170 499 aaKnown RBP10.52□□□□□ -0.73
ITGB1-217ENST00000494395 MDM2Q00987 491 aaPredicted RBP10.52□□□□□ -0.73
ITGB1-217ENST00000494395 SBK1Q52WX2 424 aa10.52□□□□□ -0.73
ITGB1-217ENST00000494395 C12orf60Q5U649 245 aa10.52□□□□□ -0.73
ITGB1-217ENST00000494395 TBC1D2Q9BYX2 928 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms