RNA–Protein interactions for RNA: ENST00000494327.1

HPS3-207, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 556 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-207ENST00000494327 CTGFP29279 349 aa26.22■■□□□ 1.79
HPS3-207ENST00000494327 IRX3P78415 501 aaPredicted RBP26.22■■□□□ 1.79
HPS3-207ENST00000494327 CCDC129Q6ZRS4 1044 aa26.22■■□□□ 1.79
HPS3-207ENST00000494327 C16orf86Q6ZW13 317 aa26.22■■□□□ 1.79
HPS3-207ENST00000494327 ANKRD13CQ8N6S4 541 aa26.22■■□□□ 1.79
HPS3-207ENST00000494327 EPB41L4AQ9HCS5 686 aaPredicted RBP26.22■■□□□ 1.79
HPS3-207ENST00000494327 TAOK2Q9UL54 1235 aa26.22■■□□□ 1.79
HPS3-207ENST00000494327 SBK1Q52WX2 424 aa26.21■■□□□ 1.79
HPS3-207ENST00000494327 IFNL3Q8IZI9 196 aa26.21■■□□□ 1.79
HPS3-207ENST00000494327 TMEM179Q6ZVK1 233 aa26.2■■□□□ 1.78
HPS3-207ENST00000494327 TRIM47Q96LD4 638 aa26.2■■□□□ 1.78
HPS3-207ENST00000494327 NACAP1Q9BZK3 213 aa26.2■■□□□ 1.78
HPS3-207ENST00000494327 USP14P54578 494 aa26.19■■□□□ 1.78
HPS3-207ENST00000494327 SOX10P56693 466 aa26.19■■□□□ 1.78
HPS3-207ENST00000494327 CCDC17Q96LX7 622 aa26.19■■□□□ 1.78
HPS3-207ENST00000494327 KIAA1683Q9H0B3 1180 aa26.19■■□□□ 1.78
HPS3-207ENST00000494327 PTCH2Q9Y6C5 1203 aa26.19■■□□□ 1.78
HPS3-207ENST00000494327 LOC285556D6RIA3 1793 aa26.18■■□□□ 1.78
HPS3-207ENST00000494327 GNRH1P01148 92 aa26.18■■□□□ 1.78
HPS3-207ENST00000494327 HOXA7P31268 230 aaPredicted RBP26.18■■□□□ 1.78
HPS3-207ENST00000494327 FCGRTP55899 365 aa26.18■■□□□ 1.78
HPS3-207ENST00000494327 P2RX7Q99572 595 aaKnown RBP26.18■■□□□ 1.78
HPS3-207ENST00000494327 OSBPL3Q9H4L5 887 aa26.18■■□□□ 1.78
HPS3-207ENST00000494327 MKNK2Q9HBH9 465 aa26.18■■□□□ 1.78
HPS3-207ENST00000494327 HOXD10P28358 340 aa26.17■■□□□ 1.78
HPS3-207ENST00000494327 GCLCP48506 637 aaPredicted RBP26.17■■□□□ 1.78
HPS3-207ENST00000494327 CLEC10AQ8IUN9 316 aa26.17■■□□□ 1.78
HPS3-207ENST00000494327 C12orf42Q96LP6 360 aa26.17■■□□□ 1.78
HPS3-207ENST00000494327 FAM227BQ96M60 508 aa26.17■■□□□ 1.78
HPS3-207ENST00000494327 NAPBQ9H115 298 aa26.17■■□□□ 1.78
HPS3-207ENST00000494327 HELLSQ9NRZ9 838 aa26.17■■□□□ 1.78
HPS3-207ENST00000494327 ZSWIM8A7E2V4 1837 aa26.16■■□□□ 1.78
HPS3-207ENST00000494327 A0A1W2PRG0 241 aa26.16■■□□□ 1.78
HPS3-207ENST00000494327 HERVK_113P62684 666 aa26.15■■□□□ 1.78
HPS3-207ENST00000494327 ATP2B2Q01814 1243 aa26.15■■□□□ 1.78
HPS3-207ENST00000494327 ICA1Q05084 483 aa26.15■■□□□ 1.78
HPS3-207ENST00000494327 FAM110CQ1W6H9 321 aa26.15■■□□□ 1.78
HPS3-207ENST00000494327 ARHGEF10LQ9HCE6 1279 aa26.15■■□□□ 1.78
HPS3-207ENST00000494327 SRRDQ9UH36 339 aa26.15■■□□□ 1.78
HPS3-207ENST00000494327 A0A0D9SFI3 127 aa26.14■■□□□ 1.78
HPS3-207ENST00000494327 USP17L15C9J2P7 530 aa26.14■■□□□ 1.78
HPS3-207ENST00000494327 USP17L13C9JLJ4 530 aa26.14■■□□□ 1.78
HPS3-207ENST00000494327 USP17L11C9JVI0 530 aa26.14■■□□□ 1.78
HPS3-207ENST00000494327 USP17L18D6R9N7 530 aa26.14■■□□□ 1.78
HPS3-207ENST00000494327 USP17L22D6RA61 530 aa26.14■■□□□ 1.78
HPS3-207ENST00000494327 USP17L17D6RBQ6 530 aa26.14■■□□□ 1.78
HPS3-207ENST00000494327 USP17L19D6RCP7 530 aa26.14■■□□□ 1.78
HPS3-207ENST00000494327 USP17L20D6RJB6 530 aa26.14■■□□□ 1.78
HPS3-207ENST00000494327 VCAM1P19320 739 aa26.14■■□□□ 1.78
HPS3-207ENST00000494327 PRMT2P55345 433 aa26.14■■□□□ 1.78
HPS3-207ENST00000494327 USP17L24Q0WX57 530 aa26.14■■□□□ 1.78
HPS3-207ENST00000494327 NMIQ13287 307 aaPredicted RBP26.14■■□□□ 1.78
HPS3-207ENST00000494327 MCMDC2Q4G0Z9 681 aa26.14■■□□□ 1.78
HPS3-207ENST00000494327 MYPNQ86TC9 1320 aa26.14■■□□□ 1.77
HPS3-207ENST00000494327 TNPO2O14787 897 aaKnown RBP26.13■■□□□ 1.77
HPS3-207ENST00000494327 PEX10O60683 326 aa26.13■■□□□ 1.77
HPS3-207ENST00000494327 PRDM1O75626 825 aa26.13■■□□□ 1.77
HPS3-207ENST00000494327 PDE4AP27815 886 aa26.13■■□□□ 1.77
HPS3-207ENST00000494327 SLC9C1Q4G0N8 1177 aa26.13■■□□□ 1.77
HPS3-207ENST00000494327 VPS53Q5VIR6 699 aa26.13■■□□□ 1.77
HPS3-207ENST00000494327 SIAH1Q8IUQ4 282 aa26.13■■□□□ 1.77
HPS3-207ENST00000494327 SDSP20132 328 aa26.12■■□□□ 1.77
HPS3-207ENST00000494327 RASA1P20936 1047 aa26.12■■□□□ 1.77
HPS3-207ENST00000494327 CATSPERGQ6ZRH7 1159 aa26.12■■□□□ 1.77
HPS3-207ENST00000494327 ZNF444Q8N0Y2 327 aaPredicted RBP26.12■■□□□ 1.77
HPS3-207ENST00000494327 RAET1EQ8TD07 263 aa26.12■■□□□ 1.77
HPS3-207ENST00000494327 RPAP3Q9H6T3 665 aaPredicted RBP26.12■■□□□ 1.77
HPS3-207ENST00000494327 KANSL2Q9H9L4 492 aa26.12■■□□□ 1.77
HPS3-207ENST00000494327 ROBO3Q96MS0 1386 aa26.11■■□□□ 1.77
HPS3-207ENST00000494327 EEF2P13639 858 aaKnown RBP26.11■■□□□ 1.77
HPS3-207ENST00000494327 PRKCZQ05513 592 aa26.11■■□□□ 1.77
HPS3-207ENST00000494327 PPARAQ07869 468 aa26.11■■□□□ 1.77
HPS3-207ENST00000494327 NBPF11Q86T75 865 aa26.11■■□□□ 1.77
HPS3-207ENST00000494327 TICAM2Q86XR7 235 aa26.11■■□□□ 1.77
HPS3-207ENST00000494327 SH3TC2Q8TF17 1288 aa26.11■■□□□ 1.77
HPS3-207ENST00000494327 PAGR1Q9BTK6 254 aa26.11■■□□□ 1.77
HPS3-207ENST00000494327 SH2D4AQ9H788 454 aa26.11■■□□□ 1.77
HPS3-207ENST00000494327 ZNF287Q9HBT7 754 aa26.11■■□□□ 1.77
HPS3-207ENST00000494327 GABRQQ9UN88 632 aa26.11■■□□□ 1.77
HPS3-207ENST00000494327 FOXP2O15409 715 aa26.1■■□□□ 1.77
HPS3-207ENST00000494327 MYCP01106 439 aaPredicted RBP26.1■■□□□ 1.77
HPS3-207ENST00000494327 SLC3A2P08195 630 aaKnown RBP26.1■■□□□ 1.77
HPS3-207ENST00000494327 TXNRD2Q9NNW7 524 aa26.1■■□□□ 1.77
HPS3-207ENST00000494327 RBPJLQ9UBG7 517 aa26.1■■□□□ 1.77
HPS3-207ENST00000494327 TMX2Q9Y320 296 aa26.1■■□□□ 1.77
HPS3-207ENST00000494327 RAD21O60216 631 aa26.09■■□□□ 1.77
HPS3-207ENST00000494327 KIAA1755Q5JYT7 1200 aa26.09■■□□□ 1.77
HPS3-207ENST00000494327 SPICE1Q8N0Z3 855 aa26.09■■□□□ 1.77
HPS3-207ENST00000494327 GPRC5AQ8NFJ5 357 aa26.09■■□□□ 1.77
HPS3-207ENST00000494327 COA7Q96BR5 231 aa26.09■■□□□ 1.77
HPS3-207ENST00000494327 ARMC5Q96C12 935 aa26.09■■□□□ 1.77
HPS3-207ENST00000494327 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.09■■□□□ 1.77
HPS3-207ENST00000494327 MORF4L1Q9UBU8 362 aa26.09■■□□□ 1.77
HPS3-207ENST00000494327 PDE4BQ07343 736 aa26.08■■□□□ 1.77
HPS3-207ENST00000494327 ZNF589Q86UQ0 364 aaPredicted RBP26.08■■□□□ 1.77
HPS3-207ENST00000494327 GTF3C2Q8WUA4 911 aaPredicted RBP26.08■■□□□ 1.77
HPS3-207ENST00000494327 TANGO6Q9C0B7 1094 aa26.08■■□□□ 1.77
HPS3-207ENST00000494327 DIAPH3Q9NSV4 1193 aa26.08■■□□□ 1.77
HPS3-207ENST00000494327 MYH8P13535 1937 aa26.08■■□□□ 1.76
HPS3-207ENST00000494327 FLT3LGP49771 235 aa26.07■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms