RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 ANGEL1Q9UNK9 670 aaKnown RBP7.25□□□□□ -1.25
ITGB1-216ENST00000493758 CAPN6Q9Y6Q1 641 aa7.25□□□□□ -1.25
ITGB1-216ENST00000493758 GNAT3A8MTJ3 354 aa7.24□□□□□ -1.25
ITGB1-216ENST00000493758 TCF3P15923 654 aa7.24□□□□□ -1.25
ITGB1-216ENST00000493758 CCNFP41002 786 aa7.24□□□□□ -1.25
ITGB1-216ENST00000493758 LRRFIP1Q32MZ4 808 aaKnown RBP7.24□□□□□ -1.25
ITGB1-216ENST00000493758 TAB3Q8N5C8 712 aaPredicted RBP7.24□□□□□ -1.25
ITGB1-216ENST00000493758 PIWIL2Q8TC59 973 aaKnown RBP7.24□□□□□ -1.25
ITGB1-216ENST00000493758 TMEM40Q8WWA1 233 aa7.24□□□□□ -1.25
ITGB1-216ENST00000493758 NKD1Q969G9 470 aa7.24□□□□□ -1.25
ITGB1-216ENST00000493758 TPX2Q9ULW0 747 aaKnown RBP7.24□□□□□ -1.25
ITGB1-216ENST00000493758 CEP131Q9UPN4 1083 aa7.24□□□□□ -1.25
ITGB1-216ENST00000493758 SLC22A31A6NKX4 558 aa7.23□□□□□ -1.25
ITGB1-216ENST00000493758 SOX9P48436 509 aa7.23□□□□□ -1.25
ITGB1-216ENST00000493758 GP2P55259 537 aaKnown RBP7.23□□□□□ -1.25
ITGB1-216ENST00000493758 OVOS1Q6IE37 1185 aa7.23□□□□□ -1.25
ITGB1-216ENST00000493758 THAP5Q7Z6K1 395 aa7.23□□□□□ -1.25
ITGB1-216ENST00000493758 AGBL5Q8NDL9 886 aa7.23□□□□□ -1.25
ITGB1-216ENST00000493758 RIN3Q8TB24 985 aa7.23□□□□□ -1.25
ITGB1-216ENST00000493758 RNF141Q8WVD5 230 aa7.23□□□□□ -1.25
ITGB1-216ENST00000493758 HRASLS5Q96KN8 279 aa7.23□□□□□ -1.25
ITGB1-216ENST00000493758 ASPNQ9BXN1 380 aa7.23□□□□□ -1.25
ITGB1-216ENST00000493758 CNNM2Q9H8M5 875 aa7.23□□□□□ -1.25
ITGB1-216ENST00000493758 PAK6Q9NQU5 681 aaPredicted RBP7.23□□□□□ -1.25
ITGB1-216ENST00000493758 SLC5A6Q9Y289 635 aa7.23□□□□□ -1.25
ITGB1-216ENST00000493758 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.23□□□□□ -1.25
ITGB1-216ENST00000493758 PITPNM2Q9BZ72 1349 aa7.23□□□□□ -1.25
ITGB1-216ENST00000493758 TNFRSF10CO14798 259 aa7.22□□□□□ -1.25
ITGB1-216ENST00000493758 RGS13O14921 159 aa7.22□□□□□ -1.25
ITGB1-216ENST00000493758 CLCQ05315 142 aa7.22□□□□□ -1.25
ITGB1-216ENST00000493758 PAK2Q13177 524 aa7.22□□□□□ -1.25
ITGB1-216ENST00000493758 ARHGAP27Q6ZUM4 889 aa7.22□□□□□ -1.25
ITGB1-216ENST00000493758 NBPF11Q86T75 865 aa7.22□□□□□ -1.25
ITGB1-216ENST00000493758 RBBP8NLQ8NC74 664 aaPredicted RBP7.22□□□□□ -1.25
ITGB1-216ENST00000493758 GPRASP2Q96D09 838 aa7.22□□□□□ -1.25
ITGB1-216ENST00000493758 CCDC74BQ96LY2 380 aa7.22□□□□□ -1.25
ITGB1-216ENST00000493758 KLHL3Q9UH77 587 aa7.22□□□□□ -1.25
ITGB1-216ENST00000493758 ST14Q9Y5Y6 855 aa7.22□□□□□ -1.25
ITGB1-216ENST00000493758 CNTNAP4Q9C0A0 1308 aa7.22□□□□□ -1.25
ITGB1-216ENST00000493758 UPK3BL1B0FP48 263 aa7.21□□□□□ -1.26
ITGB1-216ENST00000493758 CHURC1-FNTBB4DL54 471 aa7.21□□□□□ -1.26
ITGB1-216ENST00000493758 UPK3BL2E5RIL1 263 aa7.21□□□□□ -1.26
ITGB1-216ENST00000493758 XAGE3Q8WTP9 111 aa7.21□□□□□ -1.26
ITGB1-216ENST00000493758 ZNF428Q96B54 188 aa7.21□□□□□ -1.26
ITGB1-216ENST00000493758 PRR33A8MZF0 331 aa7.2□□□□□ -1.26
ITGB1-216ENST00000493758 ITIH2P19823 946 aa7.2□□□□□ -1.26
ITGB1-216ENST00000493758 NLRC3Q7RTR2 1065 aa7.2□□□□□ -1.26
ITGB1-216ENST00000493758 FLCNQ8NFG4 579 aa7.2□□□□□ -1.26
ITGB1-216ENST00000493758 ASB11Q8WXH4 323 aa7.2□□□□□ -1.26
ITGB1-216ENST00000493758 VWCEQ96DN2 955 aa7.2□□□□□ -1.26
ITGB1-216ENST00000493758 UBOX5O94941 541 aa7.19□□□□□ -1.26
ITGB1-216ENST00000493758 INTS3Q68E01 1043 aaKnown RBP7.19□□□□□ -1.26
ITGB1-216ENST00000493758 GK5Q6ZS86 529 aa7.19□□□□□ -1.26
ITGB1-216ENST00000493758 CBLL1Q75N03 491 aa7.19□□□□□ -1.26
ITGB1-216ENST00000493758 CDH24Q86UP0 819 aa7.19□□□□□ -1.26
ITGB1-216ENST00000493758 ATG4CQ96DT6 458 aa7.19□□□□□ -1.26
ITGB1-216ENST00000493758 Q96M66 194 aa7.19□□□□□ -1.26
ITGB1-216ENST00000493758 SEMA3GQ9NS98 782 aa7.19□□□□□ -1.26
ITGB1-216ENST00000493758 OAS3Q9Y6K5 1087 aaKnown RBP7.19□□□□□ -1.26
ITGB1-216ENST00000493758 SRFP11831 508 aa7.18□□□□□ -1.26
ITGB1-216ENST00000493758 NME1P15531 152 aaKnown RBP7.18□□□□□ -1.26
ITGB1-216ENST00000493758 RAG1P15918 1043 aa7.18□□□□□ -1.26
ITGB1-216ENST00000493758 FUT4P22083 530 aa7.18□□□□□ -1.26
ITGB1-216ENST00000493758 MCM4P33991 863 aa7.18□□□□□ -1.26
ITGB1-216ENST00000493758 RBM25P49756 843 aaKnown RBP7.18□□□□□ -1.26
ITGB1-216ENST00000493758 RNF4P78317 190 aa7.18□□□□□ -1.26
ITGB1-216ENST00000493758 TNK2Q07912 1038 aa7.18□□□□□ -1.26
ITGB1-216ENST00000493758 ARSHQ5FYA8 562 aa7.18□□□□□ -1.26
ITGB1-216ENST00000493758 SPRED2Q7Z698 418 aa7.18□□□□□ -1.26
ITGB1-216ENST00000493758 PHACTR4Q8IZ21 702 aa7.18□□□□□ -1.26
ITGB1-216ENST00000493758 DTWD2Q8NBA8 298 aa7.18□□□□□ -1.26
ITGB1-216ENST00000493758 SEC16BQ96JE7 1060 aa7.18□□□□□ -1.26
ITGB1-216ENST00000493758 KREMEN1Q96MU8 473 aa7.18□□□□□ -1.26
ITGB1-216ENST00000493758 TM9SF2Q99805 663 aa7.18□□□□□ -1.26
ITGB1-216ENST00000493758 GPR62Q9BZJ7 368 aa7.18□□□□□ -1.26
ITGB1-216ENST00000493758 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.18□□□□□ -1.26
ITGB1-216ENST00000493758 CCSER2Q9H7U1 834 aa7.18□□□□□ -1.26
ITGB1-216ENST00000493758 FAM155AB1AL88 458 aaPredicted RBP7.17□□□□□ -1.26
ITGB1-216ENST00000493758 AOC3Q16853 763 aa7.17□□□□□ -1.26
ITGB1-216ENST00000493758 ANGEL2Q5VTE6 544 aaKnown RBP7.17□□□□□ -1.26
ITGB1-216ENST00000493758 LMCD1Q9NZU5 365 aa7.17□□□□□ -1.26
ITGB1-216ENST00000493758 STRIP2Q9ULQ0 834 aa7.17□□□□□ -1.26
ITGB1-216ENST00000493758 C9orf131Q5VYM1 1079 aa7.16□□□□□ -1.26
ITGB1-216ENST00000493758 ZNF574Q6ZN55 896 aaPredicted RBP7.16□□□□□ -1.26
ITGB1-216ENST00000493758 ABI1Q8IZP0 508 aa7.16□□□□□ -1.26
ITGB1-216ENST00000493758 C19orf47Q8N9M1 422 aaKnown RBP7.16□□□□□ -1.26
ITGB1-216ENST00000493758 OR6P1Q8NGX9 317 aa7.16□□□□□ -1.26
ITGB1-216ENST00000493758 BAHD1Q8TBE0 780 aaPredicted RBP7.16□□□□□ -1.26
ITGB1-216ENST00000493758 FERD3LQ96RJ6 166 aa7.16□□□□□ -1.26
ITGB1-216ENST00000493758 KIF2CQ99661 725 aa7.16□□□□□ -1.26
ITGB1-216ENST00000493758 GINM1Q9NU53 330 aa7.16□□□□□ -1.26
ITGB1-216ENST00000493758 ADGRE2Q9UHX3 823 aa7.16□□□□□ -1.26
ITGB1-216ENST00000493758 KCNH3Q9ULD8 1083 aa7.16□□□□□ -1.26
ITGB1-216ENST00000493758 CD8BP10966 210 aa7.15□□□□□ -1.26
ITGB1-216ENST00000493758 ERCC5P28715 1186 aaPredicted RBP7.15□□□□□ -1.26
ITGB1-216ENST00000493758 TNNI2P48788 182 aa7.15□□□□□ -1.26
ITGB1-216ENST00000493758 GAB4Q2WGN9 574 aa7.15□□□□□ -1.26
ITGB1-216ENST00000493758 TMPRSS7Q7RTY8 843 aa7.15□□□□□ -1.26
ITGB1-216ENST00000493758 HSPA12BQ96MM6 686 aa7.15□□□□□ -1.26
ITGB1-216ENST00000493758 ACBD3Q9H3P7 528 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms