RNA–Protein interactions for RNA: ENST00000493542.1

TCN2-207, Transcript of transcobalamin 2, humanhuman

TSL 3

Gene TCN2, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCN2-207ENST00000493542 GPRC5AQ8NFJ5 357 aa11.34□□□□□ -0.59
TCN2-207ENST00000493542 RHPN1Q8TCX5 695 aa11.34□□□□□ -0.59
TCN2-207ENST00000493542 SOCS4Q8WXH5 440 aa11.34□□□□□ -0.59
TCN2-207ENST00000493542 USP6NLQ92738 828 aa11.34□□□□□ -0.59
TCN2-207ENST00000493542 P2RX7Q99572 595 aaKnown RBP11.34□□□□□ -0.59
TCN2-207ENST00000493542 RWDD1Q9H446 243 aaPredicted RBP11.34□□□□□ -0.59
TCN2-207ENST00000493542 TXNRD2Q9NNW7 524 aa11.34□□□□□ -0.59
TCN2-207ENST00000493542 GPR108Q9NPR9 543 aa11.34□□□□□ -0.59
TCN2-207ENST00000493542 AATFQ9NY61 560 aaKnown RBP eCLIP11.34□□□□□ -0.59
TCN2-207ENST00000493542 PI4KBQ9UBF8 816 aa11.34□□□□□ -0.59
TCN2-207ENST00000493542 GTF3C3Q9Y5Q9 886 aa11.34□□□□□ -0.59
TCN2-207ENST00000493542 FLT1P17948 1338 aa11.34□□□□□ -0.59
TCN2-207ENST00000493542 DNAH12Q6ZR08 3092 aa11.33□□□□□ -0.6
TCN2-207ENST00000493542 MUC3AQ02505 3323 aa11.33□□□□□ -0.6
TCN2-207ENST00000493542 RAB11FIP3O75154 756 aa11.33□□□□□ -0.6
TCN2-207ENST00000493542 CYP2E1P05181 493 aaPredicted RBP11.33□□□□□ -0.6
TCN2-207ENST00000493542 UQCRFS1P1P0C7P4 283 aa11.33□□□□□ -0.6
TCN2-207ENST00000493542 RGS2P41220 211 aa11.33□□□□□ -0.6
TCN2-207ENST00000493542 RTP1P59025 263 aa11.33□□□□□ -0.6
TCN2-207ENST00000493542 IRX3P78415 501 aaPredicted RBP11.33□□□□□ -0.6
TCN2-207ENST00000493542 NUCB1Q02818 461 aa11.33□□□□□ -0.6
TCN2-207ENST00000493542 MTMR2Q13614 643 aa11.33□□□□□ -0.6
TCN2-207ENST00000493542 Q3C1V9 767 aa11.33□□□□□ -0.6
TCN2-207ENST00000493542 GORABQ5T7V8 394 aa11.33□□□□□ -0.6
TCN2-207ENST00000493542 EAF2Q96CJ1 260 aaPredicted RBP11.33□□□□□ -0.6
TCN2-207ENST00000493542 DBNDD2Q9BQY9 259 aa11.33□□□□□ -0.6
TCN2-207ENST00000493542 DHX36Q9H2U1 1008 aaKnown RBP11.33□□□□□ -0.6
TCN2-207ENST00000493542 AS3MTQ9HBK9 375 aa11.33□□□□□ -0.6
TCN2-207ENST00000493542 SNRKQ9NRH2 765 aa11.33□□□□□ -0.6
TCN2-207ENST00000493542 LRP2BPQ9P2M1 347 aa11.33□□□□□ -0.6
TCN2-207ENST00000493542 ATP11BQ9Y2G3 1177 aa11.33□□□□□ -0.6
TCN2-207ENST00000493542 CDH23Q9H251 3354 aa11.33□□□□□ -0.6
TCN2-207ENST00000493542 TTC28Q96AY4 2481 aa11.33□□□□□ -0.6
TCN2-207ENST00000493542 ASNSP08243 561 aa11.32□□□□□ -0.6
TCN2-207ENST00000493542 PDE4AP27815 886 aa11.32□□□□□ -0.6
TCN2-207ENST00000493542 MAPK4P31152 587 aa11.32□□□□□ -0.6
TCN2-207ENST00000493542 PLA2G5P39877 138 aa11.32□□□□□ -0.6
TCN2-207ENST00000493542 HERVK_113P62684 666 aa11.32□□□□□ -0.6
TCN2-207ENST00000493542 SMAD3P84022 425 aaKnown RBP11.32□□□□□ -0.6
TCN2-207ENST00000493542 G3BP1Q13283 466 aaKnown RBP eCLIP11.32□□□□□ -0.6
TCN2-207ENST00000493542 TNNI3KQ59H18 835 aa11.32□□□□□ -0.6
TCN2-207ENST00000493542 NAA16Q6N069 864 aaPredicted RBP11.32□□□□□ -0.6
TCN2-207ENST00000493542 MAPKAPK5Q8IW41 473 aa11.32□□□□□ -0.6
TCN2-207ENST00000493542 CCAR1Q8IX12 1150 aaKnown RBP11.32□□□□□ -0.6
TCN2-207ENST00000493542 USP38Q8NB14 1042 aa11.32□□□□□ -0.6
TCN2-207ENST00000493542 TGFBRAP1Q8WUH2 860 aa11.32□□□□□ -0.6
TCN2-207ENST00000493542 PORCNQ9H237 461 aa11.32□□□□□ -0.6
TCN2-207ENST00000493542 PRDM5Q9NQX1 630 aaPredicted RBP11.32□□□□□ -0.6
TCN2-207ENST00000493542 RBPJLQ9UBG7 517 aa11.32□□□□□ -0.6
TCN2-207ENST00000493542 FPGT-TNNI3KV9GXZ4 949 aa11.32□□□□□ -0.6
TCN2-207ENST00000493542 RLFQ13129 1914 aa11.31□□□□□ -0.6
TCN2-207ENST00000493542 TMEM265A0A087WTH1 108 aa11.31□□□□□ -0.6
TCN2-207ENST00000493542 SMARCA5O60264 1052 aaPredicted RBP11.31□□□□□ -0.6
TCN2-207ENST00000493542 GDF11O95390 407 aa11.31□□□□□ -0.6
TCN2-207ENST00000493542 MORN1Q5T089 497 aa11.31□□□□□ -0.6
TCN2-207ENST00000493542 CENPQQ7L2Z9 268 aaPredicted RBP11.31□□□□□ -0.6
TCN2-207ENST00000493542 GPR142Q7Z601 462 aa11.31□□□□□ -0.6
TCN2-207ENST00000493542 PLEKHH3Q7Z736 793 aa11.31□□□□□ -0.6
TCN2-207ENST00000493542 FOXP4Q8IVH2 680 aaPredicted RBP11.31□□□□□ -0.6
TCN2-207ENST00000493542 BADQ92934 168 aa11.31□□□□□ -0.6
TCN2-207ENST00000493542 FAM122AQ96E09 287 aa11.31□□□□□ -0.6
TCN2-207ENST00000493542 KIF1BPQ96EK5 621 aa11.31□□□□□ -0.6
TCN2-207ENST00000493542 ZNF512BQ96KM6 892 aaPredicted RBP11.31□□□□□ -0.6
TCN2-207ENST00000493542 APBA2Q99767 749 aa11.31□□□□□ -0.6
TCN2-207ENST00000493542 PAGR1Q9BTK6 254 aa11.31□□□□□ -0.6
TCN2-207ENST00000493542 PIH1D3Q9NQM4 214 aaKnown RBP11.31□□□□□ -0.6
TCN2-207ENST00000493542 PALD1Q9ULE6 856 aa11.31□□□□□ -0.6
TCN2-207ENST00000493542 ZBTB21Q9ULJ3 1066 aa11.31□□□□□ -0.6
TCN2-207ENST00000493542 NAV1Q8NEY1 1877 aa11.3□□□□□ -0.6
TCN2-207ENST00000493542 C19orf81C9J6K1 198 aa11.3□□□□□ -0.6
TCN2-207ENST00000493542 USP17L10C9JJH3 530 aa11.3□□□□□ -0.6
TCN2-207ENST00000493542 BAG3O95817 575 aa11.3□□□□□ -0.6
TCN2-207ENST00000493542 PLCG2P16885 1265 aa11.3□□□□□ -0.6
TCN2-207ENST00000493542 CNGA1P29973 690 aa11.3□□□□□ -0.6
TCN2-207ENST00000493542 ZAP70P43403 619 aa11.3□□□□□ -0.6
TCN2-207ENST00000493542 ERVK-9P63128 1117 aa11.3□□□□□ -0.6
TCN2-207ENST00000493542 ERVK-24P63145 666 aa11.3□□□□□ -0.6
TCN2-207ENST00000493542 DYNLL1P63167 89 aaKnown RBP11.3□□□□□ -0.6
TCN2-207ENST00000493542 HSP90AB4PQ58FF6 505 aa11.3□□□□□ -0.6
TCN2-207ENST00000493542 TTC39AQ5SRH9 613 aa11.3□□□□□ -0.6
TCN2-207ENST00000493542 OTUD7AQ8TE49 926 aaPredicted RBP11.3□□□□□ -0.6
TCN2-207ENST00000493542 EDC3Q96F86 508 aaKnown RBP11.3□□□□□ -0.6
TCN2-207ENST00000493542 CWC22Q9HCG8 908 aaKnown RBP11.3□□□□□ -0.6
TCN2-207ENST00000493542 EMILIN3Q9NT22 766 aa11.3□□□□□ -0.6
TCN2-207ENST00000493542 GINM1Q9NU53 330 aa11.3□□□□□ -0.6
TCN2-207ENST00000493542 TLR7Q9NYK1 1049 aaKnown RBP11.3□□□□□ -0.6
TCN2-207ENST00000493542 TMOD4Q9NZQ9 345 aa11.3□□□□□ -0.6
TCN2-207ENST00000493542 DDX20Q9UHI6 824 aaKnown RBP11.3□□□□□ -0.6
TCN2-207ENST00000493542 DBNLQ9UJU6 430 aaKnown RBP11.3□□□□□ -0.6
TCN2-207ENST00000493542 NDUFB9Q9Y6M9 179 aa11.3□□□□□ -0.6
TCN2-207ENST00000493542 DNM1LO00429 736 aa11.29□□□□□ -0.6
TCN2-207ENST00000493542 IGSF3O75054 1194 aa11.29□□□□□ -0.6
TCN2-207ENST00000493542 CNMDO75829 334 aa11.29□□□□□ -0.6
TCN2-207ENST00000493542 MAP2K5Q13163 448 aa11.29□□□□□ -0.6
TCN2-207ENST00000493542 GRIN2CQ14957 1233 aa11.29□□□□□ -0.6
TCN2-207ENST00000493542 GJC2Q5T442 439 aaPredicted RBP11.29□□□□□ -0.6
TCN2-207ENST00000493542 MFSD14CQ5VZR4 134 aa11.29□□□□□ -0.6
TCN2-207ENST00000493542 SLC39A5Q6ZMH5 540 aa11.29□□□□□ -0.6
TCN2-207ENST00000493542 SKAP1Q86WV1 359 aa11.29□□□□□ -0.6
TCN2-207ENST00000493542 LPAR1Q92633 364 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms