RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 IFNL3Q8IZI9 196 aa13.82□□□□□ -0.2
CTSA-209ENST00000493522 NKX2-3Q8TAU0 364 aa13.82□□□□□ -0.2
CTSA-209ENST00000493522 RAET1EQ8TD07 263 aa13.82□□□□□ -0.2
CTSA-209ENST00000493522 RUFY2Q8WXA3 655 aa13.82□□□□□ -0.2
CTSA-209ENST00000493522 PICK1Q9NRD5 415 aa13.82□□□□□ -0.2
CTSA-209ENST00000493522 SRRDQ9UH36 339 aa13.82□□□□□ -0.2
CTSA-209ENST00000493522 KCNH4Q9UQ05 1017 aa13.82□□□□□ -0.2
CTSA-209ENST00000493522 COLQQ9Y215 455 aaPredicted RBP13.82□□□□□ -0.2
CTSA-209ENST00000493522 ROBO3Q96MS0 1386 aa13.82□□□□□ -0.2
CTSA-209ENST00000493522 CTNND1O60716 968 aaKnown RBP13.81□□□□□ -0.2
CTSA-209ENST00000493522 ECM2O94769 699 aaPredicted RBP13.81□□□□□ -0.2
CTSA-209ENST00000493522 GDF11O95390 407 aa13.81□□□□□ -0.2
CTSA-209ENST00000493522 FMNL1O95466 1100 aaPredicted RBP13.81□□□□□ -0.2
CTSA-209ENST00000493522 METTL16Q86W50 562 aaKnown RBP13.81□□□□□ -0.2
CTSA-209ENST00000493522 STK11IPQ8N1F8 1099 aa13.81□□□□□ -0.2
CTSA-209ENST00000493522 SLC44A5Q8NCS7 719 aa13.81□□□□□ -0.2
CTSA-209ENST00000493522 DYNLL2Q96FJ2 89 aa13.81□□□□□ -0.2
CTSA-209ENST00000493522 TRIM47Q96LD4 638 aa13.81□□□□□ -0.2
CTSA-209ENST00000493522 PARK7Q99497 189 aaKnown RBP13.81□□□□□ -0.2
CTSA-209ENST00000493522 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.81□□□□□ -0.2
CTSA-209ENST00000493522 ZSWIM8A7E2V4 1837 aa13.8□□□□□ -0.2
CTSA-209ENST00000493522 H0YGN5 161 aa13.8□□□□□ -0.2
CTSA-209ENST00000493522 SMIM22K7EJ46 135 aa13.8□□□□□ -0.2
CTSA-209ENST00000493522 FOXP2O15409 715 aa13.8□□□□□ -0.2
CTSA-209ENST00000493522 HSPD1P10809 573 aaKnown RBP13.8□□□□□ -0.2
CTSA-209ENST00000493522 OSBPP22059 807 aa13.8□□□□□ -0.2
CTSA-209ENST00000493522 GRK4P32298 578 aa13.8□□□□□ -0.2
CTSA-209ENST00000493522 SHMT1P34896 483 aa13.8□□□□□ -0.2
CTSA-209ENST00000493522 CAP2P40123 477 aa13.8□□□□□ -0.2
CTSA-209ENST00000493522 GABPAQ06546 454 aa13.8□□□□□ -0.2
CTSA-209ENST00000493522 RRP1BQ14684 758 aaKnown RBP13.8□□□□□ -0.2
CTSA-209ENST00000493522 MTFR1Q15390 333 aa13.8□□□□□ -0.2
CTSA-209ENST00000493522 SBK1Q52WX2 424 aa13.8□□□□□ -0.2
CTSA-209ENST00000493522 IL25Q9H293 177 aa13.8□□□□□ -0.2
CTSA-209ENST00000493522 SWAP70Q9UH65 585 aa13.8□□□□□ -0.2
CTSA-209ENST00000493522 MYPNQ86TC9 1320 aa13.8□□□□□ -0.2
CTSA-209ENST00000493522 ADGRA2Q96PE1 1338 aa13.8□□□□□ -0.2
CTSA-209ENST00000493522 TRIOBPQ9H2D6 2365 aa13.79□□□□□ -0.2
CTSA-209ENST00000493522 CDC45O75419 566 aa13.79□□□□□ -0.2
CTSA-209ENST00000493522 CTGFP29279 349 aa13.79□□□□□ -0.2
CTSA-209ENST00000493522 PPARAQ07869 468 aa13.79□□□□□ -0.2
CTSA-209ENST00000493522 SHROOM1Q2M3G4 852 aaPredicted RBP13.79□□□□□ -0.2
CTSA-209ENST00000493522 CASC1Q6TDU7 716 aa13.79□□□□□ -0.2
CTSA-209ENST00000493522 C16orf86Q6ZW13 317 aa13.79□□□□□ -0.2
CTSA-209ENST00000493522 CCDC84Q86UT8 332 aaPredicted RBP13.79□□□□□ -0.2
CTSA-209ENST00000493522 ZBTB21Q9ULJ3 1066 aa13.79□□□□□ -0.2
CTSA-209ENST00000493522 ZMYM6O95789 1325 aa13.79□□□□□ -0.2
CTSA-209ENST00000493522 LAMA3Q16787 3333 aa13.79□□□□□ -0.2
CTSA-209ENST00000493522 MPHOSPH10O00566 681 aaKnown RBP13.78□□□□□ -0.2
CTSA-209ENST00000493522 CXCL11O14625 94 aa13.78□□□□□ -0.2
CTSA-209ENST00000493522 SLC3A2P08195 630 aaKnown RBP13.78□□□□□ -0.2
CTSA-209ENST00000493522 ASNSP08243 561 aa13.78□□□□□ -0.2
CTSA-209ENST00000493522 CDK8P49336 464 aa13.78□□□□□ -0.2
CTSA-209ENST00000493522 FCGRTP55899 365 aa13.78□□□□□ -0.2
CTSA-209ENST00000493522 UBXN2AP68543 259 aa13.78□□□□□ -0.2
CTSA-209ENST00000493522 MOGSQ13724 837 aa13.78□□□□□ -0.2
CTSA-209ENST00000493522 ABCB5Q2M3G0 1257 aa13.78□□□□□ -0.2
CTSA-209ENST00000493522 CERKLQ49MI3 558 aaPredicted RBP13.78□□□□□ -0.2
CTSA-209ENST00000493522 TATDN1Q6P1N9 297 aa13.78□□□□□ -0.2
CTSA-209ENST00000493522 DPF3Q92784 378 aa13.78□□□□□ -0.2
CTSA-209ENST00000493522 SHISA4Q96DD7 197 aa13.78□□□□□ -0.2
CTSA-209ENST00000493522 BIN2Q9UBW5 565 aaPredicted RBP13.78□□□□□ -0.2
CTSA-209ENST00000493522 TAOK2Q9UL54 1235 aa13.78□□□□□ -0.2
CTSA-209ENST00000493522 SGSM2O43147 1006 aa13.77□□□□□ -0.21
CTSA-209ENST00000493522 GH2P01242 217 aa13.77□□□□□ -0.21
CTSA-209ENST00000493522 GJB1P08034 283 aa13.77□□□□□ -0.21
CTSA-209ENST00000493522 PTPRAP18433 802 aa13.77□□□□□ -0.21
CTSA-209ENST00000493522 GJA8P48165 433 aa13.77□□□□□ -0.21
CTSA-209ENST00000493522 ALX1Q15699 326 aa13.77□□□□□ -0.21
CTSA-209ENST00000493522 PARP14Q460N5 1801 aa13.77□□□□□ -0.21
CTSA-209ENST00000493522 CHRDL2Q6WN34 429 aa13.77□□□□□ -0.21
CTSA-209ENST00000493522 FASTKD5Q7L8L6 764 aaKnown RBP13.77□□□□□ -0.21
CTSA-209ENST00000493522 SLAIN1Q8ND83 568 aa13.77□□□□□ -0.21
CTSA-209ENST00000493522 HTATIP2Q9BUP3 242 aa13.77□□□□□ -0.21
CTSA-209ENST00000493522 RNF208Q9H0X6 261 aa13.77□□□□□ -0.21
CTSA-209ENST00000493522 CABP5Q9NP86 173 aa13.77□□□□□ -0.21
CTSA-209ENST00000493522 ZHX2Q9Y6X8 837 aa13.77□□□□□ -0.21
CTSA-209ENST00000493522 FGAP02671 866 aa13.76□□□□□ -0.21
CTSA-209ENST00000493522 CYP2C8P10632 490 aa13.76□□□□□ -0.21
CTSA-209ENST00000493522 BCRP11274 1271 aa13.76□□□□□ -0.21
CTSA-209ENST00000493522 CCL5P13501 91 aa13.76□□□□□ -0.21
CTSA-209ENST00000493522 HAND2P61296 217 aa13.76□□□□□ -0.21
CTSA-209ENST00000493522 JAG1P78504 1218 aa13.76□□□□□ -0.21
CTSA-209ENST00000493522 PRKCZQ05513 592 aa13.76□□□□□ -0.21
CTSA-209ENST00000493522 CTDSPL2Q05D32 466 aa13.76□□□□□ -0.21
CTSA-209ENST00000493522 PDE4BQ07343 736 aa13.76□□□□□ -0.21
CTSA-209ENST00000493522 RAB3GAP1Q15042 981 aa13.76□□□□□ -0.21
CTSA-209ENST00000493522 ESYT1Q9BSJ8 1104 aa13.76□□□□□ -0.21
CTSA-209ENST00000493522 DSCC1Q9BVC3 393 aa13.76□□□□□ -0.21
CTSA-209ENST00000493522 MKNK2Q9HBH9 465 aa13.76□□□□□ -0.21
CTSA-209ENST00000493522 AS3MTQ9HBK9 375 aa13.76□□□□□ -0.21
CTSA-209ENST00000493522 ZNF287Q9HBT7 754 aa13.76□□□□□ -0.21
CTSA-209ENST00000493522 GINM1Q9NU53 330 aa13.76□□□□□ -0.21
CTSA-209ENST00000493522 A0A0G2JLL6 359 aaPredicted RBP13.75□□□□□ -0.21
CTSA-209ENST00000493522 TRIM75PA6NK02 468 aa13.75□□□□□ -0.21
CTSA-209ENST00000493522 USP17L5A8MUK1 530 aa13.75□□□□□ -0.21
CTSA-209ENST00000493522 PRDM1O75626 825 aa13.75□□□□□ -0.21
CTSA-209ENST00000493522 AKR1B1P15121 316 aa13.75□□□□□ -0.21
CTSA-209ENST00000493522 GPAT2Q6NUI2 795 aa13.75□□□□□ -0.21
CTSA-209ENST00000493522 KIAA1211Q6ZU35 1233 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms