RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 TLR6Q9Y2C9 796 aa5.89□□□□□ -1.47
PTCD3-218ENST00000493430 XPCQ01831 940 aaPredicted RBP5.88□□□□□ -1.47
PTCD3-218ENST00000493430 DNAJB8Q8NHS0 232 aa5.88□□□□□ -1.47
PTCD3-218ENST00000493430 ACSF2Q96CM8 615 aaPredicted RBP5.88□□□□□ -1.47
PTCD3-218ENST00000493430 TRIT1Q9H3H1 467 aaKnown RBP5.88□□□□□ -1.47
PTCD3-218ENST00000493430 BPNT1O95861 308 aa5.87□□□□□ -1.47
PTCD3-218ENST00000493430 ESR1P03372 595 aa5.87□□□□□ -1.47
PTCD3-218ENST00000493430 SYDE1Q6ZW31 735 aaPredicted RBP5.87□□□□□ -1.47
PTCD3-218ENST00000493430 CREG2Q8IUH2 290 aa5.87□□□□□ -1.47
PTCD3-218ENST00000493430 PHC3Q8NDX5 983 aa5.87□□□□□ -1.47
PTCD3-218ENST00000493430 ABHD4Q8TB40 342 aa5.87□□□□□ -1.47
PTCD3-218ENST00000493430 Q96M66 194 aa5.87□□□□□ -1.47
PTCD3-218ENST00000493430 DUSP15Q9H1R2 295 aaPredicted RBP5.87□□□□□ -1.47
PTCD3-218ENST00000493430 USP31Q70CQ4 1352 aa5.87□□□□□ -1.47
PTCD3-218ENST00000493430 SCRIBQ14160 1630 aa5.86□□□□□ -1.47
PTCD3-218ENST00000493430 BICRAQ9NZM4 1560 aa5.86□□□□□ -1.47
PTCD3-218ENST00000493430 DNAJC25-GNG10A0A024R161 153 aa5.86□□□□□ -1.47
PTCD3-218ENST00000493430 RBAK-RBAKDNI3L0D1 243 aa5.86□□□□□ -1.47
PTCD3-218ENST00000493430 TSPAN15O95858 294 aa5.86□□□□□ -1.47
PTCD3-218ENST00000493430 PLCG1P19174 1290 aa5.86□□□□□ -1.47
PTCD3-218ENST00000493430 TPP2P29144 1249 aaPredicted RBP5.86□□□□□ -1.47
PTCD3-218ENST00000493430 YARSP54577 528 aaKnown RBP5.86□□□□□ -1.47
PTCD3-218ENST00000493430 KRTAP19-4Q3LI73 84 aa5.86□□□□□ -1.47
PTCD3-218ENST00000493430 FBLN7Q53RD9 439 aa5.86□□□□□ -1.47
PTCD3-218ENST00000493430 RALGPS1Q5JS13 557 aa5.86□□□□□ -1.47
PTCD3-218ENST00000493430 TMC4Q7Z404 712 aa5.86□□□□□ -1.47
PTCD3-218ENST00000493430 AEBP1Q8IUX7 1158 aa5.86□□□□□ -1.47
PTCD3-218ENST00000493430 FAM13CQ8NE31 585 aa5.86□□□□□ -1.47
PTCD3-218ENST00000493430 CYB5D2Q8WUJ1 264 aa5.86□□□□□ -1.47
PTCD3-218ENST00000493430 MYLIPQ8WY64 445 aa5.86□□□□□ -1.47
PTCD3-218ENST00000493430 TOX2Q96NM4 488 aa5.86□□□□□ -1.47
PTCD3-218ENST00000493430 GPATCH2Q9NW75 528 aa5.86□□□□□ -1.47
PTCD3-218ENST00000493430 TMEM59LQ9UK28 342 aa5.86□□□□□ -1.47
PTCD3-218ENST00000493430 KCNH3Q9ULD8 1083 aa5.86□□□□□ -1.47
PTCD3-218ENST00000493430 CORINQ9Y5Q5 1042 aa5.86□□□□□ -1.47
PTCD3-218ENST00000493430 WASH4PA8MWX3 477 aa5.85□□□□□ -1.47
PTCD3-218ENST00000493430 UPK3BL1B0FP48 263 aa5.85□□□□□ -1.47
PTCD3-218ENST00000493430 UPK3BL2E5RIL1 263 aa5.85□□□□□ -1.47
PTCD3-218ENST00000493430 CILPO75339 1184 aa5.85□□□□□ -1.47
PTCD3-218ENST00000493430 CTSHP09668 335 aa5.85□□□□□ -1.47
PTCD3-218ENST00000493430 HK2P52789 917 aa5.85□□□□□ -1.47
PTCD3-218ENST00000493430 LMNB2Q03252 620 aa5.85□□□□□ -1.47
PTCD3-218ENST00000493430 CAMK2GQ13555 558 aaPredicted RBP5.85□□□□□ -1.47
PTCD3-218ENST00000493430 GAB4Q2WGN9 574 aa5.85□□□□□ -1.47
PTCD3-218ENST00000493430 SPOCD1Q6ZMY3 1216 aa5.85□□□□□ -1.47
PTCD3-218ENST00000493430 BNC2Q6ZN30 1099 aaPredicted RBP5.85□□□□□ -1.47
PTCD3-218ENST00000493430 ANKLE2Q86XL3 938 aa5.85□□□□□ -1.47
PTCD3-218ENST00000493430 FBXO15Q8NCQ5 510 aaPredicted RBP5.85□□□□□ -1.47
PTCD3-218ENST00000493430 PPP1R13LQ8WUF5 828 aa5.85□□□□□ -1.47
PTCD3-218ENST00000493430 DIRC2Q96SL1 478 aa5.85□□□□□ -1.47
PTCD3-218ENST00000493430 NSUN3Q9H649 340 aaKnown RBP5.85□□□□□ -1.47
PTCD3-218ENST00000493430 FAM221AA4D161 298 aa5.84□□□□□ -1.47
PTCD3-218ENST00000493430 TMEM201Q5SNT2 666 aa5.84□□□□□ -1.47
PTCD3-218ENST00000493430 RELL1Q8IUW5 271 aa5.84□□□□□ -1.47
PTCD3-218ENST00000493430 ZSCAN18Q8TBC5 510 aaPredicted RBP5.84□□□□□ -1.47
PTCD3-218ENST00000493430 GATAD2BQ8WXI9 593 aa5.84□□□□□ -1.47
PTCD3-218ENST00000493430 FAM161BQ96MY7 647 aa5.84□□□□□ -1.47
PTCD3-218ENST00000493430 GPR62Q9BZJ7 368 aa5.84□□□□□ -1.47
PTCD3-218ENST00000493430 ADAMTS10Q9H324 1103 aa5.84□□□□□ -1.47
PTCD3-218ENST00000493430 NACADO15069 1562 aa5.84□□□□□ -1.48
PTCD3-218ENST00000493430 NFIBO00712 420 aa5.83□□□□□ -1.48
PTCD3-218ENST00000493430 SORBS3O60504 671 aa5.83□□□□□ -1.48
PTCD3-218ENST00000493430 PF4P02776 101 aa5.83□□□□□ -1.48
PTCD3-218ENST00000493430 HPXP02790 462 aa5.83□□□□□ -1.48
PTCD3-218ENST00000493430 SRFP11831 508 aa5.83□□□□□ -1.48
PTCD3-218ENST00000493430 CFPP27918 469 aa5.83□□□□□ -1.48
PTCD3-218ENST00000493430 ERVFC1P60507 584 aa5.83□□□□□ -1.48
PTCD3-218ENST00000493430 DNAJC14Q6Y2X3 702 aaPredicted RBP5.83□□□□□ -1.48
PTCD3-218ENST00000493430 TSPYL5Q86VY4 417 aaPredicted RBP5.83□□□□□ -1.48
PTCD3-218ENST00000493430 CILP2Q8IUL8 1156 aa5.83□□□□□ -1.48
PTCD3-218ENST00000493430 SLFN12Q8IYM2 578 aa5.83□□□□□ -1.48
PTCD3-218ENST00000493430 DTWD2Q8NBA8 298 aa5.83□□□□□ -1.48
PTCD3-218ENST00000493430 CRELD1Q96HD1 420 aa5.83□□□□□ -1.48
PTCD3-218ENST00000493430 TMEM74Q96NL1 305 aa5.83□□□□□ -1.48
PTCD3-218ENST00000493430 DCP1AQ9NPI6 582 aaPredicted RBP5.83□□□□□ -1.48
PTCD3-218ENST00000493430 DUSP13Q9UII6 198 aa5.83□□□□□ -1.48
PTCD3-218ENST00000493430 PRR36Q9H6K5 1346 aa5.82□□□□□ -1.48
PTCD3-218ENST00000493430 F6X3S4 739 aa5.82□□□□□ -1.48
PTCD3-218ENST00000493430 F13A1P00488 732 aa5.82□□□□□ -1.48
PTCD3-218ENST00000493430 TMEM253P0C7T8 217 aa5.82□□□□□ -1.48
PTCD3-218ENST00000493430 C1QTNF9P0C862 333 aa5.82□□□□□ -1.48
PTCD3-218ENST00000493430 PDIA4P13667 645 aaKnown RBP5.82□□□□□ -1.48
PTCD3-218ENST00000493430 GBP2P32456 591 aaPredicted RBP5.82□□□□□ -1.48
PTCD3-218ENST00000493430 TNNI2P48788 182 aa5.82□□□□□ -1.48
PTCD3-218ENST00000493430 EGR3Q06889 387 aa5.82□□□□□ -1.48
PTCD3-218ENST00000493430 PWP1Q13610 501 aa5.82□□□□□ -1.48
PTCD3-218ENST00000493430 RNF141Q8WVD5 230 aa5.82□□□□□ -1.48
PTCD3-218ENST00000493430 SYTL4Q96C24 671 aaPredicted RBP5.82□□□□□ -1.48
PTCD3-218ENST00000493430 RSRP1Q9BUV0 290 aa5.82□□□□□ -1.48
PTCD3-218ENST00000493430 EPB41L4BQ9H329 900 aa5.82□□□□□ -1.48
PTCD3-218ENST00000493430 MRS2Q9HD23 443 aa5.82□□□□□ -1.48
PTCD3-218ENST00000493430 LTKP29376 864 aa5.81□□□□□ -1.48
PTCD3-218ENST00000493430 ITGAEP38570 1179 aa5.81□□□□□ -1.48
PTCD3-218ENST00000493430 FBXO33Q7Z6M2 555 aa5.81□□□□□ -1.48
PTCD3-218ENST00000493430 LRRC56Q8IYG6 542 aaPredicted RBP5.81□□□□□ -1.48
PTCD3-218ENST00000493430 OXR1Q8N573 874 aa5.81□□□□□ -1.48
PTCD3-218ENST00000493430 PDZD8Q8NEN9 1154 aa5.81□□□□□ -1.48
PTCD3-218ENST00000493430 DHX38Q92620 1227 aaKnown RBP5.81□□□□□ -1.48
PTCD3-218ENST00000493430 RHOVQ96L33 236 aa5.81□□□□□ -1.48
PTCD3-218ENST00000493430 CCDC74BQ96LY2 380 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms