RNA–Protein interactions for RNA: ENST00000493208.1

IRF1-210, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best)

Gene IRF1, Length 1,023 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-210ENST00000493208 RABGAP1Q9Y3P9 1069 aa16.29■□□□□ 0.2
IRF1-210ENST00000493208 MYH1P12882 1939 aa16.29■□□□□ 0.2
IRF1-210ENST00000493208 RNF113AO15541 343 aaKnown RBP16.28■□□□□ 0.2
IRF1-210ENST00000493208 MYCP01106 439 aaPredicted RBP16.28■□□□□ 0.2
IRF1-210ENST00000493208 MX1P20591 662 aa16.28■□□□□ 0.2
IRF1-210ENST00000493208 GABPAQ06546 454 aa16.28■□□□□ 0.2
IRF1-210ENST00000493208 ZYXQ15942 572 aaKnown RBP16.28■□□□□ 0.2
IRF1-210ENST00000493208 C12orf60Q5U649 245 aa16.28■□□□□ 0.2
IRF1-210ENST00000493208 P2RX7Q99572 595 aaKnown RBP16.28■□□□□ 0.2
IRF1-210ENST00000493208 FSD1Q9BTV5 496 aa16.28■□□□□ 0.2
IRF1-210ENST00000493208 HTATIP2Q9BUP3 242 aa16.28■□□□□ 0.2
IRF1-210ENST00000493208 IVNS1ABPQ9Y6Y0 642 aa16.28■□□□□ 0.2
IRF1-210ENST00000493208 PHIPQ8WWQ0 1821 aa16.28■□□□□ 0.2
IRF1-210ENST00000493208 NAV1Q8NEY1 1877 aa16.27■□□□□ 0.2
IRF1-210ENST00000493208 HMGCRP04035 888 aa16.27■□□□□ 0.2
IRF1-210ENST00000493208 APPP05067 770 aa16.27■□□□□ 0.2
IRF1-210ENST00000493208 CCL5P13501 91 aa16.27■□□□□ 0.2
IRF1-210ENST00000493208 EN2P19622 333 aaPredicted RBP16.27■□□□□ 0.2
IRF1-210ENST00000493208 TDO2P48775 406 aa16.27■□□□□ 0.2
IRF1-210ENST00000493208 ERVK-9P63128 1117 aa16.27■□□□□ 0.2
IRF1-210ENST00000493208 ERVK-24P63145 666 aa16.27■□□□□ 0.2
IRF1-210ENST00000493208 ICA1Q05084 483 aa16.27■□□□□ 0.2
IRF1-210ENST00000493208 PPP4R3BQ5MIZ7 849 aa16.27■□□□□ 0.2
IRF1-210ENST00000493208 TICAM2Q86XR7 235 aa16.27■□□□□ 0.2
IRF1-210ENST00000493208 MB21D1Q8N884 522 aa16.27■□□□□ 0.2
IRF1-210ENST00000493208 PAGR1Q9BTK6 254 aa16.27■□□□□ 0.2
IRF1-210ENST00000493208 RWDD1Q9H446 243 aaPredicted RBP16.27■□□□□ 0.2
IRF1-210ENST00000493208 KANSL2Q9H9L4 492 aa16.27■□□□□ 0.2
IRF1-210ENST00000493208 MKNK2Q9HBH9 465 aa16.27■□□□□ 0.2
IRF1-210ENST00000493208 GOPCQ9HD26 462 aa16.27■□□□□ 0.2
IRF1-210ENST00000493208 EMILIN3Q9NT22 766 aa16.27■□□□□ 0.2
IRF1-210ENST00000493208 PTPRFP10586 1907 aa16.27■□□□□ 0.19
IRF1-210ENST00000493208 RBBP6Q7Z6E9 1792 aaKnown RBP16.26■□□□□ 0.19
IRF1-210ENST00000493208 USP17L12C9JPN9 530 aa16.26■□□□□ 0.19
IRF1-210ENST00000493208 USP17L21D6R901 530 aa16.26■□□□□ 0.19
IRF1-210ENST00000493208 INHAP05111 366 aa16.26■□□□□ 0.19
IRF1-210ENST00000493208 VCAM1P19320 739 aa16.26■□□□□ 0.19
IRF1-210ENST00000493208 CTGFP29279 349 aa16.26■□□□□ 0.19
IRF1-210ENST00000493208 RGS2P41220 211 aa16.26■□□□□ 0.19
IRF1-210ENST00000493208 GJA8P48165 433 aa16.26■□□□□ 0.19
IRF1-210ENST00000493208 CAP1Q01518 475 aa16.26■□□□□ 0.19
IRF1-210ENST00000493208 HDAC1Q13547 482 aaPredicted RBP16.26■□□□□ 0.19
IRF1-210ENST00000493208 ANKRD45Q5TZF3 282 aa16.26■□□□□ 0.19
IRF1-210ENST00000493208 CATSPERGQ6ZRH7 1159 aa16.26■□□□□ 0.19
IRF1-210ENST00000493208 TANGO6Q9C0B7 1094 aa16.26■□□□□ 0.19
IRF1-210ENST00000493208 CDK5RAP2Q96SN8 1893 aa16.26■□□□□ 0.19
IRF1-210ENST00000493208 MYO5AQ9Y4I1 1855 aaKnown RBP16.25■□□□□ 0.19
IRF1-210ENST00000493208 XRCC5P13010 732 aaKnown RBP16.25■□□□□ 0.19
IRF1-210ENST00000493208 CDK8P49336 464 aa16.25■□□□□ 0.19
IRF1-210ENST00000493208 COG2Q14746 738 aa16.25■□□□□ 0.19
IRF1-210ENST00000493208 SEPT2Q15019 361 aa16.25■□□□□ 0.19
IRF1-210ENST00000493208 LBX2Q6XYB7 198 aa16.25■□□□□ 0.19
IRF1-210ENST00000493208 C16orf86Q6ZW13 317 aa16.25■□□□□ 0.19
IRF1-210ENST00000493208 PUS7LQ9H0K6 701 aaKnown RBP16.25■□□□□ 0.19
IRF1-210ENST00000493208 RPAP3Q9H6T3 665 aaPredicted RBP16.25■□□□□ 0.19
IRF1-210ENST00000493208 SLC5A4Q9NY91 659 aa16.25■□□□□ 0.19
IRF1-210ENST00000493208 GABRQQ9UN88 632 aa16.25■□□□□ 0.19
IRF1-210ENST00000493208 PCDHB15Q9Y5E8 787 aa16.25■□□□□ 0.19
IRF1-210ENST00000493208 SIPA1L1O43166 1804 aa16.24■□□□□ 0.19
IRF1-210ENST00000493208 GPAA1O43292 621 aa16.24■□□□□ 0.19
IRF1-210ENST00000493208 PDE4BQ07343 736 aa16.24■□□□□ 0.19
IRF1-210ENST00000493208 SBK1Q52WX2 424 aa16.24■□□□□ 0.19
IRF1-210ENST00000493208 WDR78Q5VTH9 848 aa16.24■□□□□ 0.19
IRF1-210ENST00000493208 PLEKHH3Q7Z736 793 aa16.24■□□□□ 0.19
IRF1-210ENST00000493208 ZNF444Q8N0Y2 327 aaPredicted RBP16.24■□□□□ 0.19
IRF1-210ENST00000493208 STRBPQ96SI9 672 aaKnown RBP16.24■□□□□ 0.19
IRF1-210ENST00000493208 CRBNQ96SW2 442 aa16.24■□□□□ 0.19
IRF1-210ENST00000493208 HMX1Q9NP08 348 aaPredicted RBP16.24■□□□□ 0.19
IRF1-210ENST00000493208 WDR46O15213 610 aaKnown RBP16.23■□□□□ 0.19
IRF1-210ENST00000493208 PRKAB2O43741 272 aa16.23■□□□□ 0.19
IRF1-210ENST00000493208 TFRCP02786 760 aaKnown RBP16.23■□□□□ 0.19
IRF1-210ENST00000493208 ZKSCAN1P17029 563 aaPredicted RBP16.23■□□□□ 0.19
IRF1-210ENST00000493208 JAG1P78504 1218 aa16.23■□□□□ 0.19
IRF1-210ENST00000493208 ATP2B2Q01814 1243 aa16.23■□□□□ 0.19
IRF1-210ENST00000493208 CTR9Q6PD62 1173 aa16.23■□□□□ 0.19
IRF1-210ENST00000493208 U2AF1L4Q8WU68 220 aaKnown RBP16.23■□□□□ 0.19
IRF1-210ENST00000493208 EVI5LQ96CN4 794 aa16.23■□□□□ 0.19
IRF1-210ENST00000493208 TMX2Q9Y320 296 aa16.23■□□□□ 0.19
IRF1-210ENST00000493208 RPTORQ8N122 1335 aa16.22■□□□□ 0.19
IRF1-210ENST00000493208 MINDY4BA8MYZ0 360 aa16.22■□□□□ 0.19
IRF1-210ENST00000493208 PATL2C9JE40 543 aaKnown RBP16.22■□□□□ 0.19
IRF1-210ENST00000493208 STRNO43815 780 aa16.22■□□□□ 0.19
IRF1-210ENST00000493208 SGPL1O95470 568 aa16.22■□□□□ 0.19
IRF1-210ENST00000493208 ELNP15502 786 aa16.22■□□□□ 0.19
IRF1-210ENST00000493208 COPB2P35606 906 aa16.22■□□□□ 0.19
IRF1-210ENST00000493208 MTFR1Q15390 333 aa16.22■□□□□ 0.19
IRF1-210ENST00000493208 ACER1Q8TDN7 264 aa16.22■□□□□ 0.19
IRF1-210ENST00000493208 APBA2Q99767 749 aa16.22■□□□□ 0.19
IRF1-210ENST00000493208 NAPBQ9H115 298 aa16.22■□□□□ 0.19
IRF1-210ENST00000493208 RBPJLQ9UBG7 517 aa16.22■□□□□ 0.19
IRF1-210ENST00000493208 MGAMO43451 1857 aa16.21■□□□□ 0.19
IRF1-210ENST00000493208 RAD21O60216 631 aa16.21■□□□□ 0.19
IRF1-210ENST00000493208 FLOT1O75955 427 aa16.21■□□□□ 0.19
IRF1-210ENST00000493208 CYP2D6P10635 497 aa16.21■□□□□ 0.19
IRF1-210ENST00000493208 MFAP1P55081 439 aaKnown RBP16.21■□□□□ 0.19
IRF1-210ENST00000493208 MFSD14CQ5VZR4 134 aa16.21■□□□□ 0.19
IRF1-210ENST00000493208 GPR142Q7Z601 462 aa16.21■□□□□ 0.19
IRF1-210ENST00000493208 ANKLE1Q8NAG6 615 aa16.21■□□□□ 0.19
IRF1-210ENST00000493208 DYNLL2Q96FJ2 89 aa16.21■□□□□ 0.19
IRF1-210ENST00000493208 VCPKMTQ9H867 229 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms