RNA–Protein interactions for RNA: ENST00000493199.1

NEK4-205, Transcript of NIMA related kinase 4, humanhuman

TSL 3

Gene NEK4, Length 355 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-205ENST00000493199 PPATQ06203 517 aa6.21□□□□□ -1.42
NEK4-205ENST00000493199 IKQ13123 557 aaPredicted RBP6.21□□□□□ -1.42
NEK4-205ENST00000493199 SGMS1Q86VZ5 419 aa6.21□□□□□ -1.42
NEK4-205ENST00000493199 ERO1BQ86YB8 467 aa6.21□□□□□ -1.42
NEK4-205ENST00000493199 SCYL3Q8IZE3 742 aa6.21□□□□□ -1.42
NEK4-205ENST00000493199 FAM177A1Q8N128 213 aaPredicted RBP6.21□□□□□ -1.42
NEK4-205ENST00000493199 STK11IPQ8N1F8 1099 aa6.21□□□□□ -1.42
NEK4-205ENST00000493199 TRPM4Q8TD43 1214 aa6.21□□□□□ -1.42
NEK4-205ENST00000493199 LPAR1Q92633 364 aa6.21□□□□□ -1.42
NEK4-205ENST00000493199 BRF1Q92994 677 aa6.21□□□□□ -1.42
NEK4-205ENST00000493199 CCDC102AQ96A19 550 aa6.21□□□□□ -1.42
NEK4-205ENST00000493199 WRNIP1Q96S55 665 aa6.21□□□□□ -1.42
NEK4-205ENST00000493199 LLPHQ9BRT6 129 aaKnown RBP6.21□□□□□ -1.42
NEK4-205ENST00000493199 GLT8D2Q9H1C3 349 aa6.21□□□□□ -1.42
NEK4-205ENST00000493199 GBA2Q9HCG7 927 aaPredicted RBP6.21□□□□□ -1.42
NEK4-205ENST00000493199 EPB41L4AQ9HCS5 686 aaPredicted RBP6.21□□□□□ -1.42
NEK4-205ENST00000493199 BRMS1Q9HCU9 246 aa6.21□□□□□ -1.42
NEK4-205ENST00000493199 DDX4Q9NQI0 724 aaKnown RBP6.21□□□□□ -1.42
NEK4-205ENST00000493199 CLIP2Q9UDT6 1046 aa6.21□□□□□ -1.42
NEK4-205ENST00000493199 SEC63Q9UGP8 760 aaKnown RBP6.21□□□□□ -1.42
NEK4-205ENST00000493199 ATP6V1DQ9Y5K8 247 aa6.21□□□□□ -1.42
NEK4-205ENST00000493199 TNKSO95271 1327 aa6.21□□□□□ -1.42
NEK4-205ENST00000493199 SCN9AQ15858 1988 aa6.2□□□□□ -1.42
NEK4-205ENST00000493199 CXCL11O14625 94 aa6.2□□□□□ -1.42
NEK4-205ENST00000493199 PRDM1O75626 825 aa6.2□□□□□ -1.42
NEK4-205ENST00000493199 PARP1P09874 1014 aaKnown RBP6.2□□□□□ -1.42
NEK4-205ENST00000493199 HSPA1AP0DMV8 641 aaKnown RBP6.2□□□□□ -1.42
NEK4-205ENST00000493199 HSPA1BP0DMV9 641 aaKnown RBP6.2□□□□□ -1.42
NEK4-205ENST00000493199 RASA1P20936 1047 aa6.2□□□□□ -1.42
NEK4-205ENST00000493199 ECE1P42892 770 aa6.2□□□□□ -1.42
NEK4-205ENST00000493199 SLC1A4P43007 532 aa6.2□□□□□ -1.42
NEK4-205ENST00000493199 HIRAP54198 1017 aaPredicted RBP6.2□□□□□ -1.42
NEK4-205ENST00000493199 EXOSC10Q01780 885 aaKnown RBP6.2□□□□□ -1.42
NEK4-205ENST00000493199 GABPAQ06546 454 aa6.2□□□□□ -1.42
NEK4-205ENST00000493199 GNL2Q13823 731 aaKnown RBP6.2□□□□□ -1.42
NEK4-205ENST00000493199 SAFBQ15424 915 aaKnown RBP eCLIP6.2□□□□□ -1.42
NEK4-205ENST00000493199 MAP3K11Q16584 847 aa6.2□□□□□ -1.42
NEK4-205ENST00000493199 SLC4A8Q2Y0W8 1093 aa6.2□□□□□ -1.42
NEK4-205ENST00000493199 SLFNL1Q499Z3 407 aa6.2□□□□□ -1.42
NEK4-205ENST00000493199 ASPRV1Q53RT3 343 aa6.2□□□□□ -1.42
NEK4-205ENST00000493199 NBPF12Q5TAG4 269 aaPredicted RBP6.2□□□□□ -1.42
NEK4-205ENST00000493199 MCTP2Q6DN12 878 aa6.2□□□□□ -1.42
NEK4-205ENST00000493199 USP17L2Q6R6M4 530 aa6.2□□□□□ -1.42
NEK4-205ENST00000493199 MIGA2Q7L4E1 593 aa6.2□□□□□ -1.42
NEK4-205ENST00000493199 SLC51AQ86UW1 340 aa6.2□□□□□ -1.42
NEK4-205ENST00000493199 FAM160B2Q86V87 743 aa6.2□□□□□ -1.42
NEK4-205ENST00000493199 TEX2Q8IWB9 1127 aa6.2□□□□□ -1.42
NEK4-205ENST00000493199 PNMA1Q8ND90 353 aa6.2□□□□□ -1.42
NEK4-205ENST00000493199 GTF3C2Q8WUA4 911 aaPredicted RBP6.2□□□□□ -1.42
NEK4-205ENST00000493199 NUP133Q8WUM0 1156 aa6.2□□□□□ -1.42
NEK4-205ENST00000493199 DCAF4Q8WV16 495 aa6.2□□□□□ -1.42
NEK4-205ENST00000493199 ANKS1AQ92625 1134 aa6.2□□□□□ -1.42
NEK4-205ENST00000493199 MKL1Q969V6 931 aa6.2□□□□□ -1.42
NEK4-205ENST00000493199 CDCA5Q96FF9 252 aa6.2□□□□□ -1.42
NEK4-205ENST00000493199 DYNLL2Q96FJ2 89 aa6.2□□□□□ -1.42
NEK4-205ENST00000493199 INTS4Q96HW7 963 aaKnown RBP6.2□□□□□ -1.42
NEK4-205ENST00000493199 UPF3BQ9BZI7 483 aaKnown RBP6.2□□□□□ -1.42
NEK4-205ENST00000493199 ZNF408Q9H9D4 720 aa6.2□□□□□ -1.42
NEK4-205ENST00000493199 MTMR4Q9NYA4 1195 aa6.2□□□□□ -1.42
NEK4-205ENST00000493199 HOXC10Q9NYD6 342 aa6.2□□□□□ -1.42
NEK4-205ENST00000493199 PNMA3Q9UL41 463 aa6.2□□□□□ -1.42
NEK4-205ENST00000493199 SMC3Q9UQE7 1217 aa6.2□□□□□ -1.42
NEK4-205ENST00000493199 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.2□□□□□ -1.42
NEK4-205ENST00000493199 RBM19Q9Y4C8 960 aaKnown RBP6.2□□□□□ -1.42
NEK4-205ENST00000493199 MYH1P12882 1939 aa6.2□□□□□ -1.42
NEK4-205ENST00000493199 ECM29Q5VYK3 1845 aa6.2□□□□□ -1.42
NEK4-205ENST00000493199 KLF18A0A0U1RQI7 1052 aa6.19□□□□□ -1.42
NEK4-205ENST00000493199 GOLGA8AA7E2F4 631 aa6.19□□□□□ -1.42
NEK4-205ENST00000493199 GOLGA8BA8MQT2 603 aa6.19□□□□□ -1.42
NEK4-205ENST00000493199 POTECB2RU33 542 aa6.19□□□□□ -1.42
NEK4-205ENST00000493199 hCG_1984214I3L0E3 225 aa6.19□□□□□ -1.42
NEK4-205ENST00000493199 SH2B2O14492 632 aaPredicted RBP6.19□□□□□ -1.42
NEK4-205ENST00000493199 CELF2O95319 508 aaKnown RBP6.19□□□□□ -1.42
NEK4-205ENST00000493199 GH2P01242 217 aa6.19□□□□□ -1.42
NEK4-205ENST00000493199 CHGBP05060 677 aa6.19□□□□□ -1.42
NEK4-205ENST00000493199 OSBPP22059 807 aa6.19□□□□□ -1.42
NEK4-205ENST00000493199 GTF2A2P52657 109 aa6.19□□□□□ -1.42
NEK4-205ENST00000493199 AK2P54819 239 aa6.19□□□□□ -1.42
NEK4-205ENST00000493199 NUCB2P80303 420 aa6.19□□□□□ -1.42
NEK4-205ENST00000493199 SSRP1Q08945 709 aaKnown RBP6.19□□□□□ -1.42
NEK4-205ENST00000493199 SREBF2Q12772 1141 aa6.19□□□□□ -1.42
NEK4-205ENST00000493199 ARHGEF6Q15052 776 aa6.19□□□□□ -1.42
NEK4-205ENST00000493199 RTN1Q16799 776 aa6.19□□□□□ -1.42
NEK4-205ENST00000493199 ADCK5Q3MIX3 580 aa6.19□□□□□ -1.42
NEK4-205ENST00000493199 FAM47AQ5JRC9 791 aa6.19□□□□□ -1.42
NEK4-205ENST00000493199 NOL9Q5SY16 702 aaKnown RBP6.19□□□□□ -1.42
NEK4-205ENST00000493199 TBC1D10CQ8IV04 446 aa6.19□□□□□ -1.42
NEK4-205ENST00000493199 CCAR1Q8IX12 1150 aaKnown RBP6.19□□□□□ -1.42
NEK4-205ENST00000493199 MB21D2Q8IYB1 491 aaPredicted RBP6.19□□□□□ -1.42
NEK4-205ENST00000493199 RASEFQ8IZ41 740 aa6.19□□□□□ -1.42
NEK4-205ENST00000493199 ZNF713Q8N859 430 aaPredicted RBP6.19□□□□□ -1.42
NEK4-205ENST00000493199 FANCBQ8NB91 859 aa6.19□□□□□ -1.42
NEK4-205ENST00000493199 ZNF280CQ8ND82 737 aa6.19□□□□□ -1.42
NEK4-205ENST00000493199 RGS22Q8NE09 1264 aa6.19□□□□□ -1.42
NEK4-205ENST00000493199 GMCL1P1Q8NEA9 526 aa6.19□□□□□ -1.42
NEK4-205ENST00000493199 MPHOSPH6Q99547 160 aaKnown RBP6.19□□□□□ -1.42
NEK4-205ENST00000493199 WDR18Q9BV38 432 aa6.19□□□□□ -1.42
NEK4-205ENST00000493199 ZNF112Q9UJU3 913 aa6.19□□□□□ -1.42
NEK4-205ENST00000493199 ZBTB21Q9ULJ3 1066 aa6.19□□□□□ -1.42
NEK4-205ENST00000493199 TMX2Q9Y320 296 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms