RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 IMMTQ16891 758 aaKnown RBP16.58■□□□□ 0.24
CCM2-217ENST00000492883 GPAT2Q6NUI2 795 aa16.58■□□□□ 0.24
CCM2-217ENST00000492883 USP17L2Q6R6M4 530 aa16.58■□□□□ 0.24
CCM2-217ENST00000492883 PROCA1Q8NCQ7 364 aaPredicted RBP16.58■□□□□ 0.24
CCM2-217ENST00000492883 ACER1Q8TDN7 264 aa16.58■□□□□ 0.24
CCM2-217ENST00000492883 ARHGEF10LQ9HCE6 1279 aa16.58■□□□□ 0.24
CCM2-217ENST00000492883 NAV1Q8NEY1 1877 aa16.58■□□□□ 0.24
CCM2-217ENST00000492883 OTOFQ9HC10 1997 aa16.58■□□□□ 0.24
CCM2-217ENST00000492883 CDK5RAP2Q96SN8 1893 aa16.57■□□□□ 0.24
CCM2-217ENST00000492883 USP14P54578 494 aa16.57■□□□□ 0.24
CCM2-217ENST00000492883 TFAP4Q01664 338 aa16.57■□□□□ 0.24
CCM2-217ENST00000492883 ICA1Q05084 483 aa16.57■□□□□ 0.24
CCM2-217ENST00000492883 CRHR2Q13324 411 aa16.57■□□□□ 0.24
CCM2-217ENST00000492883 DGKZQ13574 1117 aa16.57■□□□□ 0.24
CCM2-217ENST00000492883 FAM47AQ5JRC9 791 aa16.57■□□□□ 0.24
CCM2-217ENST00000492883 RRP12Q5JTH9 1297 aaKnown RBP16.57■□□□□ 0.24
CCM2-217ENST00000492883 MFSD6Q6ZSS7 791 aa16.57■□□□□ 0.24
CCM2-217ENST00000492883 ESYT1Q9BSJ8 1104 aa16.57■□□□□ 0.24
CCM2-217ENST00000492883 KIAA1683Q9H0B3 1180 aa16.57■□□□□ 0.24
CCM2-217ENST00000492883 R3HDMLQ9H3Y0 253 aa16.57■□□□□ 0.24
CCM2-217ENST00000492883 RNF41Q9H4P4 317 aaPredicted RBP16.57■□□□□ 0.24
CCM2-217ENST00000492883 AGTPBP1Q9UPW5 1226 aa16.57■□□□□ 0.24
CCM2-217ENST00000492883 MYH1P12882 1939 aa16.57■□□□□ 0.24
CCM2-217ENST00000492883 SIPA1L1O43166 1804 aa16.56■□□□□ 0.24
CCM2-217ENST00000492883 DDX60LQ5H9U9 1706 aaKnown RBP16.56■□□□□ 0.24
CCM2-217ENST00000492883 TSPY2A6NKD2 308 aa16.56■□□□□ 0.24
CCM2-217ENST00000492883 RANBP6O60518 1105 aaKnown RBP16.56■□□□□ 0.24
CCM2-217ENST00000492883 EEF2P13639 858 aaKnown RBP16.56■□□□□ 0.24
CCM2-217ENST00000492883 PTH1RQ03431 593 aa16.56■□□□□ 0.24
CCM2-217ENST00000492883 PABPC4Q13310 644 aaKnown RBP eCLIP16.56■□□□□ 0.24
CCM2-217ENST00000492883 AKNAD1Q5T1N1 836 aa16.56■□□□□ 0.24
CCM2-217ENST00000492883 TREML2Q5T2D2 321 aa16.56■□□□□ 0.24
CCM2-217ENST00000492883 CLEC10AQ8IUN9 316 aa16.56■□□□□ 0.24
CCM2-217ENST00000492883 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.56■□□□□ 0.24
CCM2-217ENST00000492883 CFHR5Q9BXR6 569 aa16.56■□□□□ 0.24
CCM2-217ENST00000492883 SH2D4AQ9H788 454 aa16.56■□□□□ 0.24
CCM2-217ENST00000492883 EMILIN3Q9NT22 766 aa16.56■□□□□ 0.24
CCM2-217ENST00000492883 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.56■□□□□ 0.24
CCM2-217ENST00000492883 U3KPZ7 1027 aaPredicted RBP16.56■□□□□ 0.24
CCM2-217ENST00000492883 A0A1W2PRG0 241 aa16.55■□□□□ 0.24
CCM2-217ENST00000492883 GPR25O00155 361 aa16.55■□□□□ 0.24
CCM2-217ENST00000492883 FGRP09769 529 aa16.55■□□□□ 0.24
CCM2-217ENST00000492883 PCP11498 1178 aaKnown RBP16.55■□□□□ 0.24
CCM2-217ENST00000492883 OSBPP22059 807 aa16.55■□□□□ 0.24
CCM2-217ENST00000492883 SIAH1Q8IUQ4 282 aa16.55■□□□□ 0.24
CCM2-217ENST00000492883 NEDD1Q8NHV4 660 aa16.55■□□□□ 0.24
CCM2-217ENST00000492883 PARK7Q99497 189 aaKnown RBP16.55■□□□□ 0.24
CCM2-217ENST00000492883 PRDM10Q9NQV6 1147 aa16.55■□□□□ 0.24
CCM2-217ENST00000492883 SLC45A1Q9Y2W3 748 aa16.55■□□□□ 0.24
CCM2-217ENST00000492883 ORC4O43929 436 aa16.54■□□□□ 0.24
CCM2-217ENST00000492883 CYP2C8P10632 490 aa16.54■□□□□ 0.24
CCM2-217ENST00000492883 TBC1D10CQ8IV04 446 aa16.54■□□□□ 0.24
CCM2-217ENST00000492883 STAG1Q8WVM7 1258 aa16.54■□□□□ 0.24
CCM2-217ENST00000492883 MAP4K1Q92918 833 aa16.54■□□□□ 0.24
CCM2-217ENST00000492883 ANO2Q9NQ90 1003 aa16.54■□□□□ 0.24
CCM2-217ENST00000492883 CLIP2Q9UDT6 1046 aa16.54■□□□□ 0.24
CCM2-217ENST00000492883 PNMA3Q9UL41 463 aa16.54■□□□□ 0.24
CCM2-217ENST00000492883 TMX2Q9Y320 296 aa16.54■□□□□ 0.24
CCM2-217ENST00000492883 TACC3Q9Y6A5 838 aa16.54■□□□□ 0.24
CCM2-217ENST00000492883 CEP350Q5VT06 3117 aa16.53■□□□□ 0.24
CCM2-217ENST00000492883 RAD21O60216 631 aa16.53■□□□□ 0.24
CCM2-217ENST00000492883 TLR2O60603 784 aa16.53■□□□□ 0.24
CCM2-217ENST00000492883 SMCR8Q8TEV9 937 aaPredicted RBP16.53■□□□□ 0.24
CCM2-217ENST00000492883 CEP95Q96GE4 821 aa16.53■□□□□ 0.24
CCM2-217ENST00000492883 C12orf42Q96LP6 360 aa16.53■□□□□ 0.24
CCM2-217ENST00000492883 NBPF3Q9H094 633 aa16.53■□□□□ 0.24
CCM2-217ENST00000492883 MTMR4Q9NYA4 1195 aa16.53■□□□□ 0.24
CCM2-217ENST00000492883 NYAP2Q9P242 653 aa16.53■□□□□ 0.24
CCM2-217ENST00000492883 DOCK1Q14185 1865 aa16.52■□□□□ 0.24
CCM2-217ENST00000492883 IGKV6D-41A0A0C4DH26 115 aa16.52■□□□□ 0.24
CCM2-217ENST00000492883 FKTNO75072 461 aa16.52■□□□□ 0.24
CCM2-217ENST00000492883 HOXA7P31268 230 aaPredicted RBP16.52■□□□□ 0.24
CCM2-217ENST00000492883 IRX3P78415 501 aaPredicted RBP16.52■□□□□ 0.24
CCM2-217ENST00000492883 NOM1Q5C9Z4 860 aaKnown RBP16.52■□□□□ 0.24
CCM2-217ENST00000492883 PPP4R3BQ5MIZ7 849 aa16.52■□□□□ 0.24
CCM2-217ENST00000492883 ZNF296Q8WUU4 475 aaPredicted RBP16.52■□□□□ 0.24
CCM2-217ENST00000492883 ESR2Q92731 530 aa16.52■□□□□ 0.24
CCM2-217ENST00000492883 GOPCQ9HD26 462 aa16.52■□□□□ 0.24
CCM2-217ENST00000492883 CPA4Q9UI42 421 aa16.52■□□□□ 0.24
CCM2-217ENST00000492883 RBM8AQ9Y5S9 174 aaKnown RBP16.52■□□□□ 0.24
CCM2-217ENST00000492883 BAZ2AQ9UIF9 1905 aaKnown RBP16.51■□□□□ 0.23
CCM2-217ENST00000492883 USP17L15C9J2P7 530 aa16.51■□□□□ 0.23
CCM2-217ENST00000492883 USP17L13C9JLJ4 530 aa16.51■□□□□ 0.23
CCM2-217ENST00000492883 USP17L11C9JVI0 530 aa16.51■□□□□ 0.23
CCM2-217ENST00000492883 USP17L18D6R9N7 530 aa16.51■□□□□ 0.23
CCM2-217ENST00000492883 USP17L22D6RA61 530 aa16.51■□□□□ 0.23
CCM2-217ENST00000492883 USP17L17D6RBQ6 530 aa16.51■□□□□ 0.23
CCM2-217ENST00000492883 USP17L19D6RCP7 530 aa16.51■□□□□ 0.23
CCM2-217ENST00000492883 USP17L20D6RJB6 530 aa16.51■□□□□ 0.23
CCM2-217ENST00000492883 TTLL1O95922 423 aa16.51■□□□□ 0.23
CCM2-217ENST00000492883 VCAM1P19320 739 aa16.51■□□□□ 0.23
CCM2-217ENST00000492883 SP3Q02447 781 aa16.51■□□□□ 0.23
CCM2-217ENST00000492883 USP17L24Q0WX57 530 aa16.51■□□□□ 0.23
CCM2-217ENST00000492883 SPICE1Q8N0Z3 855 aa16.51■□□□□ 0.23
CCM2-217ENST00000492883 LPAR1Q92633 364 aa16.51■□□□□ 0.23
CCM2-217ENST00000492883 LSG1Q9H089 658 aaKnown RBP16.51■□□□□ 0.23
CCM2-217ENST00000492883 ASCC2Q9H1I8 757 aaPredicted RBP16.51■□□□□ 0.23
CCM2-217ENST00000492883 VCPKMTQ9H867 229 aa16.51■□□□□ 0.23
CCM2-217ENST00000492883 TRDNQ13061 729 aa16.5■□□□□ 0.23
CCM2-217ENST00000492883 C17orf99Q6UX52 265 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms