RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-219ENST00000492602 PTPREP23469 700 aa6.84□□□□□ -1.31
SEC13-219ENST00000492602 HOXA7P31268 230 aaPredicted RBP6.84□□□□□ -1.31
SEC13-219ENST00000492602 RGS3P49796 1198 aa6.84□□□□□ -1.31
SEC13-219ENST00000492602 MAP3K10Q02779 954 aa6.84□□□□□ -1.31
SEC13-219ENST00000492602 LMOD3Q0VAK6 560 aa6.84□□□□□ -1.31
SEC13-219ENST00000492602 GCKRQ14397 625 aa6.84□□□□□ -1.31
SEC13-219ENST00000492602 DIXDC1Q155Q3 683 aa6.84□□□□□ -1.31
SEC13-219ENST00000492602 SH3D19Q5HYK7 790 aa6.84□□□□□ -1.31
SEC13-219ENST00000492602 PRAMEF19Q5SWL8 479 aa6.84□□□□□ -1.31
SEC13-219ENST00000492602 PTCRAQ6ISU1 281 aaPredicted RBP6.84□□□□□ -1.31
SEC13-219ENST00000492602 KSR2Q6VAB6 950 aa6.84□□□□□ -1.31
SEC13-219ENST00000492602 SH3BP5LQ7L8J4 393 aa6.84□□□□□ -1.31
SEC13-219ENST00000492602 RNF180Q86T96 592 aa6.84□□□□□ -1.31
SEC13-219ENST00000492602 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.84□□□□□ -1.31
SEC13-219ENST00000492602 CNTNAP3BQ96NU0 1288 aa6.84□□□□□ -1.31
SEC13-219ENST00000492602 CNTNAP3Q9BZ76 1288 aa6.84□□□□□ -1.31
SEC13-219ENST00000492602 PPP1R12CQ9BZL4 782 aa6.84□□□□□ -1.31
SEC13-219ENST00000492602 UBE2ZQ9H832 354 aaPredicted RBP6.84□□□□□ -1.31
SEC13-219ENST00000492602 IL23AQ9NPF7 189 aa6.84□□□□□ -1.31
SEC13-219ENST00000492602 XPNPEP3Q9NQH7 507 aa6.84□□□□□ -1.31
SEC13-219ENST00000492602 STARD7Q9NQZ5 370 aa6.84□□□□□ -1.31
SEC13-219ENST00000492602 TMOD4Q9NZQ9 345 aa6.84□□□□□ -1.31
SEC13-219ENST00000492602 TBX21Q9UL17 535 aa6.84□□□□□ -1.31
SEC13-219ENST00000492602 SUGT1Q9Y2Z0 365 aa6.84□□□□□ -1.31
SEC13-219ENST00000492602 PCDHA11Q9Y5I1 949 aa6.84□□□□□ -1.31
SEC13-219ENST00000492602 IVNS1ABPQ9Y6Y0 642 aa6.84□□□□□ -1.31
SEC13-219ENST00000492602 PHIPQ8WWQ0 1821 aa6.84□□□□□ -1.31
SEC13-219ENST00000492602 A0A0G2JMZ2 1700 aa6.84□□□□□ -1.31
SEC13-219ENST00000492602 CLSPNQ9HAW4 1339 aa6.83□□□□□ -1.32
SEC13-219ENST00000492602 FAM196BA6NMK8 535 aa6.83□□□□□ -1.32
SEC13-219ENST00000492602 USP17L5A8MUK1 530 aa6.83□□□□□ -1.32
SEC13-219ENST00000492602 ELL2O00472 640 aaPredicted RBP6.83□□□□□ -1.32
SEC13-219ENST00000492602 PGK1P00558 417 aa6.83□□□□□ -1.32
SEC13-219ENST00000492602 CA3P07451 260 aa6.83□□□□□ -1.32
SEC13-219ENST00000492602 KCNA5P22460 613 aa6.83□□□□□ -1.32
SEC13-219ENST00000492602 ZEB1P37275 1124 aaPredicted RBP6.83□□□□□ -1.32
SEC13-219ENST00000492602 CCNA1P78396 465 aa6.83□□□□□ -1.32
SEC13-219ENST00000492602 GRB10Q13322 594 aa6.83□□□□□ -1.32
SEC13-219ENST00000492602 MTMR2Q13614 643 aa6.83□□□□□ -1.32
SEC13-219ENST00000492602 COL9A2Q14055 689 aaPredicted RBP6.83□□□□□ -1.32
SEC13-219ENST00000492602 KCTD2Q14681 263 aa6.83□□□□□ -1.32
SEC13-219ENST00000492602 LEXMQ3ZCV2 418 aa6.83□□□□□ -1.32
SEC13-219ENST00000492602 CAVIN4Q5BKX8 364 aa6.83□□□□□ -1.32
SEC13-219ENST00000492602 TMEM67Q5HYA8 995 aa6.83□□□□□ -1.32
SEC13-219ENST00000492602 ASCL5Q7RTU5 278 aa6.83□□□□□ -1.32
SEC13-219ENST00000492602 FBXO33Q7Z6M2 555 aa6.83□□□□□ -1.32
SEC13-219ENST00000492602 DPP9Q86TI2 863 aa6.83□□□□□ -1.32
SEC13-219ENST00000492602 CCER1Q8TC90 406 aaPredicted RBP6.83□□□□□ -1.32
SEC13-219ENST00000492602 GTF3C2Q8WUA4 911 aaPredicted RBP6.83□□□□□ -1.32
SEC13-219ENST00000492602 TBC1D2Q9BYX2 928 aa6.83□□□□□ -1.32
SEC13-219ENST00000492602 AS3MTQ9HBK9 375 aa6.83□□□□□ -1.32
SEC13-219ENST00000492602 SLC4A7Q9Y6M7 1214 aa6.83□□□□□ -1.32
SEC13-219ENST00000492602 DMDP11532 3685 aa6.83□□□□□ -1.32
SEC13-219ENST00000492602 DOCK1Q14185 1865 aa6.83□□□□□ -1.32
SEC13-219ENST00000492602 LOC285556D6RIA3 1793 aa6.82□□□□□ -1.32
SEC13-219ENST00000492602 ZNF536O15090 1300 aa6.82□□□□□ -1.32
SEC13-219ENST00000492602 GBF1Q92538 1859 aa6.82□□□□□ -1.32
SEC13-219ENST00000492602 ZBBXA8MT70 800 aa6.82□□□□□ -1.32
SEC13-219ENST00000492602 ENTPD3O75355 529 aa6.82□□□□□ -1.32
SEC13-219ENST00000492602 RARBP10826 455 aa6.82□□□□□ -1.32
SEC13-219ENST00000492602 CASP7P55210 303 aa6.82□□□□□ -1.32
SEC13-219ENST00000492602 PICALMQ13492 652 aa6.82□□□□□ -1.32
SEC13-219ENST00000492602 GRB14Q14449 540 aa6.82□□□□□ -1.32
SEC13-219ENST00000492602 NEUROD2Q15784 382 aa6.82□□□□□ -1.32
SEC13-219ENST00000492602 CCDC57Q2TAC2 916 aa6.82□□□□□ -1.32
SEC13-219ENST00000492602 SUGP1Q8IWZ8 645 aaKnown RBP6.82□□□□□ -1.32
SEC13-219ENST00000492602 PBXIP1Q96AQ6 731 aa6.82□□□□□ -1.32
SEC13-219ENST00000492602 OSBPL5Q9H0X9 879 aaPredicted RBP6.82□□□□□ -1.32
SEC13-219ENST00000492602 TRPC6Q9Y210 931 aa6.82□□□□□ -1.32
SEC13-219ENST00000492602 BRWD1Q9NSI6 2320 aa6.81□□□□□ -1.32
SEC13-219ENST00000492602 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.81□□□□□ -1.32
SEC13-219ENST00000492602 GRXCR2A6NFK2 248 aa6.81□□□□□ -1.32
SEC13-219ENST00000492602 IGHA2P01877 340 aa6.81□□□□□ -1.32
SEC13-219ENST00000492602 ATP2A2P16615 1042 aaKnown RBP6.81□□□□□ -1.32
SEC13-219ENST00000492602 CYP2C18P33260 490 aa6.81□□□□□ -1.32
SEC13-219ENST00000492602 TMPOP42166 694 aaKnown RBP6.81□□□□□ -1.32
SEC13-219ENST00000492602 BACE1P56817 501 aa6.81□□□□□ -1.32
SEC13-219ENST00000492602 PKN1Q16512 942 aa6.81□□□□□ -1.32
SEC13-219ENST00000492602 OLFML2BQ68BL8 750 aa6.81□□□□□ -1.32
SEC13-219ENST00000492602 NUP133Q8WUM0 1156 aa6.81□□□□□ -1.32
SEC13-219ENST00000492602 IDI2Q9BXS1 227 aa6.81□□□□□ -1.32
SEC13-219ENST00000492602 UPF3BQ9BZI7 483 aaKnown RBP6.81□□□□□ -1.32
SEC13-219ENST00000492602 IRF2BPLQ9H1B7 796 aa6.81□□□□□ -1.32
SEC13-219ENST00000492602 RABGAP1Q9Y3P9 1069 aa6.81□□□□□ -1.32
SEC13-219ENST00000492602 A0A1B0GUL6 1792 aa6.81□□□□□ -1.32
SEC13-219ENST00000492602 KMT2BQ9UMN6 2715 aaPredicted RBP6.81□□□□□ -1.32
SEC13-219ENST00000492602 DNAH14Q0VDD8 3507 aa6.81□□□□□ -1.32
SEC13-219ENST00000492602 DOCK2Q92608 1830 aa6.8□□□□□ -1.32
SEC13-219ENST00000492602 MROH7Q68CQ1 1323 aa6.8□□□□□ -1.32
SEC13-219ENST00000492602 TPRP12270 2363 aaKnown RBP6.8□□□□□ -1.32
SEC13-219ENST00000492602 PRR23AA6NEV1 266 aa6.8□□□□□ -1.32
SEC13-219ENST00000492602 H0Y858 1186 aa6.8□□□□□ -1.32
SEC13-219ENST00000492602 TBC1D12O60347 775 aa6.8□□□□□ -1.32
SEC13-219ENST00000492602 LPXNO60711 386 aa6.8□□□□□ -1.32
SEC13-219ENST00000492602 CNMDO75829 334 aa6.8□□□□□ -1.32
SEC13-219ENST00000492602 CAP2P40123 477 aa6.8□□□□□ -1.32
SEC13-219ENST00000492602 ATRXP46100 2492 aa6.8□□□□□ -1.32
SEC13-219ENST00000492602 ACLYP53396 1101 aa6.8□□□□□ -1.32
SEC13-219ENST00000492602 FOXO4P98177 505 aa6.8□□□□□ -1.32
SEC13-219ENST00000492602 ZP2Q05996 745 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms