RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 MIPEPQ99797 713 aa5□□□□□ -1.61
HMGB1P30-201ENST00000492455 PARP2Q9UGN5 583 aa5□□□□□ -1.61
HMGB1P30-201ENST00000492455 SAMM50Q9Y512 469 aa5□□□□□ -1.61
HMGB1P30-201ENST00000492455 DNAJC25-GNG10A0A024R161 153 aa4.99□□□□□ -1.61
HMGB1P30-201ENST00000492455 PSPNO60542 156 aa4.99□□□□□ -1.61
HMGB1P30-201ENST00000492455 PEX10O60683 326 aa4.99□□□□□ -1.61
HMGB1P30-201ENST00000492455 CBX7O95931 251 aa4.99□□□□□ -1.61
HMGB1P30-201ENST00000492455 DAB2P98082 770 aa4.99□□□□□ -1.61
HMGB1P30-201ENST00000492455 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.99□□□□□ -1.61
HMGB1P30-201ENST00000492455 RALGPS1Q5JS13 557 aa4.99□□□□□ -1.61
HMGB1P30-201ENST00000492455 ZBTB37Q5TC79 503 aa4.99□□□□□ -1.61
HMGB1P30-201ENST00000492455 C12orf40Q86WS4 652 aa4.99□□□□□ -1.61
HMGB1P30-201ENST00000492455 FBF1Q8TES7 1133 aa4.99□□□□□ -1.61
HMGB1P30-201ENST00000492455 ELMO3Q96BJ8 720 aa4.99□□□□□ -1.61
HMGB1P30-201ENST00000492455 SYTL4Q96C24 671 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P30-201ENST00000492455 COX4I2Q96KJ9 171 aa4.99□□□□□ -1.61
HMGB1P30-201ENST00000492455 KRTAP9-8Q9BYQ0 159 aa4.99□□□□□ -1.61
HMGB1P30-201ENST00000492455 OSBPL7Q9BZF2 842 aa4.99□□□□□ -1.61
HMGB1P30-201ENST00000492455 MCOLN1Q9GZU1 580 aa4.99□□□□□ -1.61
HMGB1P30-201ENST00000492455 KCTD3Q9Y597 815 aa4.99□□□□□ -1.61
HMGB1P30-201ENST00000492455 ST14Q9Y5Y6 855 aa4.99□□□□□ -1.61
HMGB1P30-201ENST00000492455 CAPN6Q9Y6Q1 641 aa4.99□□□□□ -1.61
HMGB1P30-201ENST00000492455 SLITRK5O94991 958 aa4.98□□□□□ -1.61
HMGB1P30-201ENST00000492455 RECKO95980 971 aa4.98□□□□□ -1.61
HMGB1P30-201ENST00000492455 ERVFC1P60507 584 aa4.98□□□□□ -1.61
HMGB1P30-201ENST00000492455 SKOR2Q2VWA4 1001 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P30-201ENST00000492455 ALG1LQ6GMV1 187 aa4.98□□□□□ -1.61
HMGB1P30-201ENST00000492455 TMC4Q7Z404 712 aa4.98□□□□□ -1.61
HMGB1P30-201ENST00000492455 UBE3DQ7Z6J8 389 aa4.98□□□□□ -1.61
HMGB1P30-201ENST00000492455 NPM2Q86SE8 214 aaKnown RBP4.98□□□□□ -1.61
HMGB1P30-201ENST00000492455 LILRA2Q8N149 483 aa4.98□□□□□ -1.61
HMGB1P30-201ENST00000492455 OXR1Q8N573 874 aa4.98□□□□□ -1.61
HMGB1P30-201ENST00000492455 MRRFQ96E11 262 aaKnown RBP4.98□□□□□ -1.61
HMGB1P30-201ENST00000492455 RNF32Q9H0A6 362 aa4.98□□□□□ -1.61
HMGB1P30-201ENST00000492455 NLRP2Q9NX02 1062 aa4.98□□□□□ -1.61
HMGB1P30-201ENST00000492455 TEX51A0A1B0GUA7 166 aa4.97□□□□□ -1.61
HMGB1P30-201ENST00000492455 TRIM13O60858 407 aa4.97□□□□□ -1.61
HMGB1P30-201ENST00000492455 CTSHP09668 335 aa4.97□□□□□ -1.61
HMGB1P30-201ENST00000492455 VAMP1P23763 118 aa4.97□□□□□ -1.61
HMGB1P30-201ENST00000492455 GNA15P30679 374 aa4.97□□□□□ -1.61
HMGB1P30-201ENST00000492455 NTF4P34130 210 aa4.97□□□□□ -1.61
HMGB1P30-201ENST00000492455 KIR3DL1P43629 444 aa4.97□□□□□ -1.61
HMGB1P30-201ENST00000492455 ZNF326Q5BKZ1 582 aaKnown RBP4.97□□□□□ -1.61
HMGB1P30-201ENST00000492455 MFSD2AQ8NA29 543 aa4.97□□□□□ -1.61
HMGB1P30-201ENST00000492455 STK35Q8TDR2 534 aa4.97□□□□□ -1.61
HMGB1P30-201ENST00000492455 CWC22Q9HCG8 908 aaKnown RBP4.97□□□□□ -1.61
HMGB1P30-201ENST00000492455 IGSF5Q9NSI5 407 aa4.97□□□□□ -1.61
HMGB1P30-201ENST00000492455 AKAP2Q9Y2D5 859 aa4.97□□□□□ -1.61
HMGB1P30-201ENST00000492455 TRIM37O94972 964 aa4.96□□□□□ -1.62
HMGB1P30-201ENST00000492455 PDE6BP35913 854 aa4.96□□□□□ -1.62
HMGB1P30-201ENST00000492455 ATP2B2Q01814 1243 aa4.96□□□□□ -1.62
HMGB1P30-201ENST00000492455 ZNF252P-AS1Q0IIN9 211 aa4.96□□□□□ -1.62
HMGB1P30-201ENST00000492455 CREG2Q8IUH2 290 aa4.96□□□□□ -1.62
HMGB1P30-201ENST00000492455 PDZD8Q8NEN9 1154 aa4.96□□□□□ -1.62
HMGB1P30-201ENST00000492455 ADAMTS10Q9H324 1103 aa4.96□□□□□ -1.62
HMGB1P30-201ENST00000492455 PCDHA4Q9UN74 947 aa4.96□□□□□ -1.62
HMGB1P30-201ENST00000492455 PRAMEF27A3QJZ7 478 aa4.95□□□□□ -1.62
HMGB1P30-201ENST00000492455 FITM1A5D6W6 292 aa4.95□□□□□ -1.62
HMGB1P30-201ENST00000492455 TRHRP34981 398 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P30-201ENST00000492455 RING1Q06587 406 aa4.95□□□□□ -1.62
HMGB1P30-201ENST00000492455 LRRC14Q15048 493 aa4.95□□□□□ -1.62
HMGB1P30-201ENST00000492455 ZXDCQ2QGD7 858 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P30-201ENST00000492455 LETMD1Q6P1Q0 360 aa4.95□□□□□ -1.62
HMGB1P30-201ENST00000492455 NXPE4Q6UWF7 544 aa4.95□□□□□ -1.62
HMGB1P30-201ENST00000492455 C3orf58Q8NDZ4 430 aa4.95□□□□□ -1.62
HMGB1P30-201ENST00000492455 INTS4Q96HW7 963 aaKnown RBP4.95□□□□□ -1.62
HMGB1P30-201ENST00000492455 BCO2Q9BYV7 579 aa4.95□□□□□ -1.62
HMGB1P30-201ENST00000492455 AK5Q9Y6K8 562 aa4.95□□□□□ -1.62
HMGB1P30-201ENST00000492455 MYOCOSA0A1B0GUC4 107 aa4.94□□□□□ -1.62
HMGB1P30-201ENST00000492455 NFKB2Q00653 900 aa4.94□□□□□ -1.62
HMGB1P30-201ENST00000492455 PSMD2Q13200 908 aa4.94□□□□□ -1.62
HMGB1P30-201ENST00000492455 SPATS1Q496A3 300 aa4.94□□□□□ -1.62
HMGB1P30-201ENST00000492455 LLGL2Q6P1M3 1020 aa4.94□□□□□ -1.62
HMGB1P30-201ENST00000492455 SP8Q8IXZ3 490 aa4.94□□□□□ -1.62
HMGB1P30-201ENST00000492455 PIWIL2Q8TC59 973 aaKnown RBP4.94□□□□□ -1.62
HMGB1P30-201ENST00000492455 DHX38Q92620 1227 aaKnown RBP4.94□□□□□ -1.62
HMGB1P30-201ENST00000492455 XYLT2Q9H1B5 865 aa4.94□□□□□ -1.62
HMGB1P30-201ENST00000492455 TRIT1Q9H3H1 467 aaKnown RBP4.94□□□□□ -1.62
HMGB1P30-201ENST00000492455 C19orf44Q9H6X5 657 aa4.94□□□□□ -1.62
HMGB1P30-201ENST00000492455 C12orf49Q9H741 205 aa4.94□□□□□ -1.62
HMGB1P30-201ENST00000492455 IRAK3Q9Y616 596 aa4.94□□□□□ -1.62
HMGB1P30-201ENST00000492455 OTOL1A6NHN0 477 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P30-201ENST00000492455 ESR1P03372 595 aa4.93□□□□□ -1.62
HMGB1P30-201ENST00000492455 AFF3P51826 1226 aaKnown RBP4.93□□□□□ -1.62
HMGB1P30-201ENST00000492455 XPCQ01831 940 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P30-201ENST00000492455 TNK2Q07912 1038 aa4.93□□□□□ -1.62
HMGB1P30-201ENST00000492455 SCARA3Q6AZY7 606 aa4.93□□□□□ -1.62
HMGB1P30-201ENST00000492455 FRMD6Q96NE9 622 aa4.93□□□□□ -1.62
HMGB1P30-201ENST00000492455 BACH2Q9BYV9 841 aa4.93□□□□□ -1.62
HMGB1P30-201ENST00000492455 CEP44Q9C0F1 390 aa4.93□□□□□ -1.62
HMGB1P30-201ENST00000492455 ZNF552Q9H707 407 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P30-201ENST00000492455 CACNA2D2Q9NY47 1150 aa4.93□□□□□ -1.62
HMGB1P30-201ENST00000492455 SPG7Q9UQ90 795 aa4.93□□□□□ -1.62
HMGB1P30-201ENST00000492455 YBX2Q9Y2T7 364 aaKnown RBP4.93□□□□□ -1.62
HMGB1P30-201ENST00000492455 SORBS3O60504 671 aa4.92□□□□□ -1.62
HMGB1P30-201ENST00000492455 PI3P19957 117 aa4.92□□□□□ -1.62
HMGB1P30-201ENST00000492455 KRTAP10-2P60368 255 aa4.92□□□□□ -1.62
HMGB1P30-201ENST00000492455 ETF1P62495 437 aaKnown RBP4.92□□□□□ -1.62
HMGB1P30-201ENST00000492455 HDXQ7Z353 690 aa4.92□□□□□ -1.62
HMGB1P30-201ENST00000492455 SPPL2CQ8IUH8 684 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms