RNA–Protein interactions for RNA: ENST00000492418.1

TMC1-205, Transcript of transmembrane channel like 1, humanhuman

TSL 3

Gene TMC1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-205ENST00000492418 PPP4R3BQ5MIZ7 849 aa13.27□□□□□ -0.29
TMC1-205ENST00000492418 SMCR8Q8TEV9 937 aaPredicted RBP13.27□□□□□ -0.29
TMC1-205ENST00000492418 CFHR5Q9BXR6 569 aa13.27□□□□□ -0.29
TMC1-205ENST00000492418 AGTPBP1Q9UPW5 1226 aa13.27□□□□□ -0.29
TMC1-205ENST00000492418 SLC45A1Q9Y2W3 748 aa13.27□□□□□ -0.29
TMC1-205ENST00000492418 RAD50Q92878 1312 aa13.27□□□□□ -0.29
TMC1-205ENST00000492418 GPR25O00155 361 aa13.26□□□□□ -0.29
TMC1-205ENST00000492418 SIPA1L1O43166 1804 aa13.26□□□□□ -0.29
TMC1-205ENST00000492418 PRDM1O75626 825 aa13.26□□□□□ -0.29
TMC1-205ENST00000492418 IRX3P78415 501 aaPredicted RBP13.26□□□□□ -0.29
TMC1-205ENST00000492418 ICA1Q05084 483 aa13.26□□□□□ -0.29
TMC1-205ENST00000492418 CTDSPL2Q05D32 466 aa13.26□□□□□ -0.29
TMC1-205ENST00000492418 KIF22Q14807 665 aa13.26□□□□□ -0.29
TMC1-205ENST00000492418 ZYXQ15942 572 aaKnown RBP13.26□□□□□ -0.29
TMC1-205ENST00000492418 IMMTQ16891 758 aaKnown RBP13.26□□□□□ -0.29
TMC1-205ENST00000492418 SH3D19Q5HYK7 790 aa13.26□□□□□ -0.29
TMC1-205ENST00000492418 MFSD6Q6ZSS7 791 aa13.26□□□□□ -0.29
TMC1-205ENST00000492418 ATAD5Q96QE3 1844 aa13.26□□□□□ -0.29
TMC1-205ENST00000492418 DSCC1Q9BVC3 393 aa13.26□□□□□ -0.29
TMC1-205ENST00000492418 RNF41Q9H4P4 317 aaPredicted RBP13.26□□□□□ -0.29
TMC1-205ENST00000492418 ANAPC4Q9UJX5 808 aa13.26□□□□□ -0.29
TMC1-205ENST00000492418 DDX60LQ5H9U9 1706 aaKnown RBP13.25□□□□□ -0.29
TMC1-205ENST00000492418 ROBO3Q96MS0 1386 aa13.25□□□□□ -0.29
TMC1-205ENST00000492418 ZMYM6O95789 1325 aa13.25□□□□□ -0.29
TMC1-205ENST00000492418 TSPY2A6NKD2 308 aa13.25□□□□□ -0.29
TMC1-205ENST00000492418 SMIM22K7EJ46 135 aa13.25□□□□□ -0.29
TMC1-205ENST00000492418 RAD21O60216 631 aa13.25□□□□□ -0.29
TMC1-205ENST00000492418 RANBP6O60518 1105 aaKnown RBP13.25□□□□□ -0.29
TMC1-205ENST00000492418 PCP11498 1178 aaKnown RBP13.25□□□□□ -0.29
TMC1-205ENST00000492418 RASA1P20936 1047 aa13.25□□□□□ -0.29
TMC1-205ENST00000492418 TFAP4Q01664 338 aa13.25□□□□□ -0.29
TMC1-205ENST00000492418 SHROOM1Q2M3G4 852 aaPredicted RBP13.25□□□□□ -0.29
TMC1-205ENST00000492418 NOM1Q5C9Z4 860 aaKnown RBP13.25□□□□□ -0.29
TMC1-205ENST00000492418 RRP12Q5JTH9 1297 aaKnown RBP13.25□□□□□ -0.29
TMC1-205ENST00000492418 KIAA1683Q9H0B3 1180 aa13.25□□□□□ -0.29
TMC1-205ENST00000492418 GOPCQ9HD26 462 aa13.25□□□□□ -0.29
TMC1-205ENST00000492418 MYH8P13535 1937 aa13.24□□□□□ -0.29
TMC1-205ENST00000492418 TLR2O60603 784 aa13.24□□□□□ -0.29
TMC1-205ENST00000492418 HAND2P61296 217 aa13.24□□□□□ -0.29
TMC1-205ENST00000492418 SP3Q02447 781 aa13.24□□□□□ -0.29
TMC1-205ENST00000492418 MOGSQ13724 837 aa13.24□□□□□ -0.29
TMC1-205ENST00000492418 GPAT2Q6NUI2 795 aa13.24□□□□□ -0.29
TMC1-205ENST00000492418 SKAP1Q86WV1 359 aa13.24□□□□□ -0.29
TMC1-205ENST00000492418 ACER1Q8TDN7 264 aa13.24□□□□□ -0.29
TMC1-205ENST00000492418 ZNF296Q8WUU4 475 aaPredicted RBP13.24□□□□□ -0.29
TMC1-205ENST00000492418 ERO1AQ96HE7 468 aa13.24□□□□□ -0.29
TMC1-205ENST00000492418 USP17L15C9J2P7 530 aa13.23□□□□□ -0.29
TMC1-205ENST00000492418 USP17L13C9JLJ4 530 aa13.23□□□□□ -0.29
TMC1-205ENST00000492418 USP17L11C9JVI0 530 aa13.23□□□□□ -0.29
TMC1-205ENST00000492418 USP17L18D6R9N7 530 aa13.23□□□□□ -0.29
TMC1-205ENST00000492418 USP17L22D6RA61 530 aa13.23□□□□□ -0.29
TMC1-205ENST00000492418 USP17L17D6RBQ6 530 aa13.23□□□□□ -0.29
TMC1-205ENST00000492418 USP17L19D6RCP7 530 aa13.23□□□□□ -0.29
TMC1-205ENST00000492418 USP17L20D6RJB6 530 aa13.23□□□□□ -0.29
TMC1-205ENST00000492418 FOXP2O15409 715 aa13.23□□□□□ -0.29
TMC1-205ENST00000492418 CDC45O75419 566 aa13.23□□□□□ -0.29
TMC1-205ENST00000492418 CYP2C8P10632 490 aa13.23□□□□□ -0.29
TMC1-205ENST00000492418 EEF2P13639 858 aaKnown RBP13.23□□□□□ -0.29
TMC1-205ENST00000492418 GUCY1A2P33402 732 aa13.23□□□□□ -0.29
TMC1-205ENST00000492418 USP17L24Q0WX57 530 aa13.23□□□□□ -0.29
TMC1-205ENST00000492418 FAM47AQ5JRC9 791 aa13.23□□□□□ -0.29
TMC1-205ENST00000492418 AKNAD1Q5T1N1 836 aa13.23□□□□□ -0.29
TMC1-205ENST00000492418 TREML2Q5T2D2 321 aa13.23□□□□□ -0.29
TMC1-205ENST00000492418 LPAR1Q92633 364 aa13.23□□□□□ -0.29
TMC1-205ENST00000492418 R3HDMLQ9H3Y0 253 aa13.23□□□□□ -0.29
TMC1-205ENST00000492418 EMILIN3Q9NT22 766 aa13.23□□□□□ -0.29
TMC1-205ENST00000492418 U3KPZ7 1027 aaPredicted RBP13.23□□□□□ -0.29
TMC1-205ENST00000492418 SGSM2O43147 1006 aa13.22□□□□□ -0.29
TMC1-205ENST00000492418 ORC4O43929 436 aa13.22□□□□□ -0.29
TMC1-205ENST00000492418 TTLL1O95922 423 aa13.22□□□□□ -0.29
TMC1-205ENST00000492418 GCLCP48506 637 aaPredicted RBP13.22□□□□□ -0.29
TMC1-205ENST00000492418 NT5C2P49902 561 aa13.22□□□□□ -0.29
TMC1-205ENST00000492418 TRDNQ13061 729 aa13.22□□□□□ -0.29
TMC1-205ENST00000492418 CCAR1Q8IX12 1150 aaKnown RBP13.22□□□□□ -0.29
TMC1-205ENST00000492418 NEDD1Q8NHV4 660 aa13.22□□□□□ -0.29
TMC1-205ENST00000492418 ESR2Q92731 530 aa13.22□□□□□ -0.29
TMC1-205ENST00000492418 CLIP2Q9UDT6 1046 aa13.22□□□□□ -0.29
TMC1-205ENST00000492418 CPA4Q9UI42 421 aa13.22□□□□□ -0.29
TMC1-205ENST00000492418 TMX2Q9Y320 296 aa13.22□□□□□ -0.29
TMC1-205ENST00000492418 LAMB1P07942 1786 aa13.22□□□□□ -0.29
TMC1-205ENST00000492418 HOXA7P31268 230 aaPredicted RBP13.21□□□□□ -0.29
TMC1-205ENST00000492418 COL13A1Q5TAT6 717 aaPredicted RBP13.21□□□□□ -0.29
TMC1-205ENST00000492418 TNS4Q8IZW8 715 aa13.21□□□□□ -0.29
TMC1-205ENST00000492418 GTF3C2Q8WUA4 911 aaPredicted RBP13.21□□□□□ -0.29
TMC1-205ENST00000492418 C12orf42Q96LP6 360 aa13.21□□□□□ -0.29
TMC1-205ENST00000492418 ESYT1Q9BSJ8 1104 aa13.21□□□□□ -0.29
TMC1-205ENST00000492418 KRT23Q9C075 422 aa13.21□□□□□ -0.29
TMC1-205ENST00000492418 TANGO6Q9C0B7 1094 aa13.21□□□□□ -0.29
TMC1-205ENST00000492418 ASCC2Q9H1I8 757 aaPredicted RBP13.21□□□□□ -0.29
TMC1-205ENST00000492418 VCPKMTQ9H867 229 aa13.21□□□□□ -0.29
TMC1-205ENST00000492418 CNNM2Q9H8M5 875 aa13.21□□□□□ -0.29
TMC1-205ENST00000492418 ANO2Q9NQ90 1003 aa13.21□□□□□ -0.29
TMC1-205ENST00000492418 NYAP2Q9P242 653 aa13.21□□□□□ -0.29
TMC1-205ENST00000492418 ISY1Q9ULR0 285 aaKnown RBP13.21□□□□□ -0.29
TMC1-205ENST00000492418 STX8Q9UNK0 236 aa13.21□□□□□ -0.29
TMC1-205ENST00000492418 PHIPQ8WWQ0 1821 aa13.2□□□□□ -0.3
TMC1-205ENST00000492418 A0A1W2PRG0 241 aa13.2□□□□□ -0.3
TMC1-205ENST00000492418 VCAM1P19320 739 aa13.2□□□□□ -0.3
TMC1-205ENST00000492418 DGKZQ13574 1117 aa13.2□□□□□ -0.3
TMC1-205ENST00000492418 CCDC178Q5BJE1 867 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms