RNA–Protein interactions for RNA: ENST00000491769.1

COL6A3-212, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5

Gene COL6A3, Length 6,731 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-212ENST00000491769 BCRP11274 1271 aa14.57□□□□□ -0.08
COL6A3-212ENST00000491769 TFAP4Q01664 338 aa14.57□□□□□ -0.08
COL6A3-212ENST00000491769 TYRO3Q06418 890 aa14.57□□□□□ -0.08
COL6A3-212ENST00000491769 CEP85LQ5SZL2 805 aa14.57□□□□□ -0.08
COL6A3-212ENST00000491769 NPATQ14207 1427 aa14.56□□□□□ -0.08
COL6A3-212ENST00000491769 FLOT1O75955 427 aa14.56□□□□□ -0.08
COL6A3-212ENST00000491769 CNGA4Q8IV77 575 aa14.56□□□□□ -0.08
COL6A3-212ENST00000491769 GKAP1Q5VSY0 366 aaPredicted RBP14.56□□□□□ -0.08
COL6A3-212ENST00000491769 AKR1B15C9JRZ8 316 aaPredicted RBP14.56□□□□□ -0.08
COL6A3-212ENST00000491769 OSBPP22059 807 aa14.56□□□□□ -0.08
COL6A3-212ENST00000491769 RALGAPBQ86X10 1494 aa14.56□□□□□ -0.08
COL6A3-212ENST00000491769 hCG_1642624A0A1W2PR95 340 aa14.56□□□□□ -0.08
COL6A3-212ENST00000491769 TMCO4Q5TGY1 634 aa14.56□□□□□ -0.08
COL6A3-212ENST00000491769 RTEL1Q9NZ71 1219 aa14.56□□□□□ -0.08
COL6A3-212ENST00000491769 TMOD1P28289 359 aa14.55□□□□□ -0.08
COL6A3-212ENST00000491769 RNASELQ05823 741 aaKnown RBP14.55□□□□□ -0.08
COL6A3-212ENST00000491769 CEP85Q6P2H3 762 aa14.55□□□□□ -0.08
COL6A3-212ENST00000491769 DBNDD2Q9BQY9 259 aa14.55□□□□□ -0.08
COL6A3-212ENST00000491769 ARPP19P56211 112 aa14.55□□□□□ -0.08
COL6A3-212ENST00000491769 HDAC1Q13547 482 aaPredicted RBP14.55□□□□□ -0.08
COL6A3-212ENST00000491769 XKR9Q5GH70 373 aa14.55□□□□□ -0.08
COL6A3-212ENST00000491769 MROH5Q6ZUA9 1318 aa14.55□□□□□ -0.08
COL6A3-212ENST00000491769 RAD50Q92878 1312 aa14.55□□□□□ -0.08
COL6A3-212ENST00000491769 ACTN4O43707 911 aaKnown RBP14.55□□□□□ -0.08
COL6A3-212ENST00000491769 NAA25Q14CX7 972 aa14.55□□□□□ -0.08
COL6A3-212ENST00000491769 ZBTB33Q86T24 672 aa14.55□□□□□ -0.08
COL6A3-212ENST00000491769 RXRBP28702 533 aa14.55□□□□□ -0.08
COL6A3-212ENST00000491769 KCTD2Q14681 263 aa14.55□□□□□ -0.08
COL6A3-212ENST00000491769 APPBP2Q92624 585 aa14.55□□□□□ -0.08
COL6A3-212ENST00000491769 LZTS2Q9BRK4 669 aa14.55□□□□□ -0.08
COL6A3-212ENST00000491769 PCF11O94913 1555 aaKnown RBP14.55□□□□□ -0.08
COL6A3-212ENST00000491769 ASXL2Q76L83 1435 aa14.55□□□□□ -0.08
COL6A3-212ENST00000491769 TYW5A2RUC4 315 aaKnown RBP14.55□□□□□ -0.08
COL6A3-212ENST00000491769 CYP2J2P51589 502 aa14.55□□□□□ -0.08
COL6A3-212ENST00000491769 KIAA1841Q6NSI8 718 aa14.55□□□□□ -0.08
COL6A3-212ENST00000491769 CABP7Q86V35 215 aa14.55□□□□□ -0.08
COL6A3-212ENST00000491769 MICAL1Q8TDZ2 1067 aa14.55□□□□□ -0.08
COL6A3-212ENST00000491769 SPDYE2BA6NHP3 402 aa14.54□□□□□ -0.08
COL6A3-212ENST00000491769 SPDYE6P0CI01 402 aa14.54□□□□□ -0.08
COL6A3-212ENST00000491769 FAM160A1Q05DH4 1040 aa14.54□□□□□ -0.08
COL6A3-212ENST00000491769 TSPYL6Q8N831 410 aa14.54□□□□□ -0.08
COL6A3-212ENST00000491769 NUB1Q9Y5A7 615 aa14.54□□□□□ -0.08
COL6A3-212ENST00000491769 KLHL40Q2TBA0 621 aa14.54□□□□□ -0.08
COL6A3-212ENST00000491769 POLR2MP0CAP2 368 aa14.54□□□□□ -0.08
COL6A3-212ENST00000491769 HPDP32754 393 aaPredicted RBP14.54□□□□□ -0.08
COL6A3-212ENST00000491769 CCNA1P78396 465 aa14.54□□□□□ -0.08
COL6A3-212ENST00000491769 RAB3IPQ96QF0 476 aaPredicted RBP14.54□□□□□ -0.08
COL6A3-212ENST00000491769 SLC52A2Q9HAB3 445 aa14.54□□□□□ -0.08
COL6A3-212ENST00000491769 IVLP07476 585 aa14.54□□□□□ -0.08
COL6A3-212ENST00000491769 SARNPP82979 210 aaKnown RBP14.54□□□□□ -0.08
COL6A3-212ENST00000491769 ZNF532Q9HCE3 1301 aa14.54□□□□□ -0.08
COL6A3-212ENST00000491769 POLR2DO15514 142 aaKnown RBP14.54□□□□□ -0.08
COL6A3-212ENST00000491769 CPA1P15085 419 aa14.54□□□□□ -0.08
COL6A3-212ENST00000491769 RPS6KA2Q15349 733 aa14.54□□□□□ -0.08
COL6A3-212ENST00000491769 CERKLQ49MI3 558 aaPredicted RBP14.54□□□□□ -0.08
COL6A3-212ENST00000491769 SLAIN2Q9P270 581 aa14.54□□□□□ -0.08
COL6A3-212ENST00000491769 THRAP3Q9Y2W1 955 aaKnown RBP14.54□□□□□ -0.08
COL6A3-212ENST00000491769 MAP7Q14244 749 aa14.53□□□□□ -0.08
COL6A3-212ENST00000491769 VPS18Q9P253 973 aa14.53□□□□□ -0.08
COL6A3-212ENST00000491769 KCNG1Q9UIX4 513 aa14.53□□□□□ -0.08
COL6A3-212ENST00000491769 IGSF22Q8N9C0 903 aa14.53□□□□□ -0.08
COL6A3-212ENST00000491769 GANCQ8TET4 914 aa14.53□□□□□ -0.08
COL6A3-212ENST00000491769 CNKSR1Q969H4 720 aa14.53□□□□□ -0.08
COL6A3-212ENST00000491769 NUF2Q9BZD4 464 aa14.53□□□□□ -0.08
COL6A3-212ENST00000491769 ZNF277Q9NRM2 450 aaPredicted RBP14.53□□□□□ -0.08
COL6A3-212ENST00000491769 MRPL11Q9Y3B7 192 aaKnown RBP14.53□□□□□ -0.08
COL6A3-212ENST00000491769 HGSO14964 777 aaPredicted RBP14.53□□□□□ -0.08
COL6A3-212ENST00000491769 STAM2O75886 525 aa14.53□□□□□ -0.08
COL6A3-212ENST00000491769 LGSNQ5TDP6 509 aa14.53□□□□□ -0.08
COL6A3-212ENST00000491769 ARMC9Q7Z3E5 817 aa14.53□□□□□ -0.08
COL6A3-212ENST00000491769 RSAD2Q8WXG1 361 aa14.53□□□□□ -0.08
COL6A3-212ENST00000491769 ANGEL1Q9UNK9 670 aaKnown RBP14.53□□□□□ -0.08
COL6A3-212ENST00000491769 AKT3Q9Y243 479 aa14.53□□□□□ -0.08
COL6A3-212ENST00000491769 SOS1Q07889 1333 aaPredicted RBP14.53□□□□□ -0.08
COL6A3-212ENST00000491769 SYNRGQ9UMZ2 1314 aa14.53□□□□□ -0.08
COL6A3-212ENST00000491769 CLRN2A0PK11 232 aa14.53□□□□□ -0.08
COL6A3-212ENST00000491769 RPS8P62241 208 aaKnown RBP14.53□□□□□ -0.08
COL6A3-212ENST00000491769 PAK1Q13153 545 aa14.53□□□□□ -0.08
COL6A3-212ENST00000491769 NCOA5Q9HCD5 579 aaKnown RBP14.53□□□□□ -0.08
COL6A3-212ENST00000491769 A2MP01023 1474 aa14.53□□□□□ -0.08
COL6A3-212ENST00000491769 POLGP54098 1239 aaPredicted RBP14.53□□□□□ -0.08
COL6A3-212ENST00000491769 NEDD9Q14511 834 aa14.53□□□□□ -0.08
COL6A3-212ENST00000491769 PRR16Q569H4 304 aa14.53□□□□□ -0.08
COL6A3-212ENST00000491769 NCAPGQ9BPX3 1015 aa14.53□□□□□ -0.08
COL6A3-212ENST00000491769 PARP2Q9UGN5 583 aa14.53□□□□□ -0.08
COL6A3-212ENST00000491769 ATF5Q9Y2D1 282 aaPredicted RBP14.53□□□□□ -0.08
COL6A3-212ENST00000491769 TOP2BQ02880 1626 aa14.53□□□□□ -0.08
COL6A3-212ENST00000491769 TRIM37O94972 964 aa14.52□□□□□ -0.08
COL6A3-212ENST00000491769 ZNF131P52739 623 aa14.52□□□□□ -0.08
COL6A3-212ENST00000491769 FAM160B1Q5W0V3 765 aa14.52□□□□□ -0.08
COL6A3-212ENST00000491769 CEP57Q86XR8 500 aa14.52□□□□□ -0.08
COL6A3-212ENST00000491769 LRRC47Q8N1G4 583 aaKnown RBP14.52□□□□□ -0.08
COL6A3-212ENST00000491769 NME8Q8N427 588 aa14.52□□□□□ -0.08
COL6A3-212ENST00000491769 ZBED2Q9BTP6 218 aa14.52□□□□□ -0.08
COL6A3-212ENST00000491769 LMCD1Q9NZU5 365 aa14.52□□□□□ -0.08
COL6A3-212ENST00000491769 MYL5Q02045 173 aa14.52□□□□□ -0.08
COL6A3-212ENST00000491769 HHATQ5VTY9 493 aa14.52□□□□□ -0.08
COL6A3-212ENST00000491769 BAG1Q99933 345 aaPredicted RBP14.52□□□□□ -0.08
COL6A3-212ENST00000491769 PCDHB13Q9Y5F0 798 aa14.52□□□□□ -0.08
COL6A3-212ENST00000491769 PPARDQ03181 441 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms