RNA–Protein interactions for RNA: ENST00000491060.1

TRAIP-211, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 1,046 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-211ENST00000491060 DDRGK1Q96HY6 314 aa16.36■□□□□ 0.21
TRAIP-211ENST00000491060 TBC1D2Q9BYX2 928 aa16.36■□□□□ 0.21
TRAIP-211ENST00000491060 SUPT16HQ9Y5B9 1047 aaKnown RBP16.36■□□□□ 0.21
TRAIP-211ENST00000491060 RBBP6Q7Z6E9 1792 aaKnown RBP16.36■□□□□ 0.21
TRAIP-211ENST00000491060 C19orf81C9J6K1 198 aa16.35■□□□□ 0.21
TRAIP-211ENST00000491060 ADCY3O60266 1144 aa16.35■□□□□ 0.21
TRAIP-211ENST00000491060 WDR78Q5VTH9 848 aa16.35■□□□□ 0.21
TRAIP-211ENST00000491060 LNPKQ9C0E8 428 aa16.35■□□□□ 0.21
TRAIP-211ENST00000491060 CWC22Q9HCG8 908 aaKnown RBP16.35■□□□□ 0.21
TRAIP-211ENST00000491060 TXNRD2Q9NNW7 524 aa16.35■□□□□ 0.21
TRAIP-211ENST00000491060 ERC2O15083 957 aa16.34■□□□□ 0.21
TRAIP-211ENST00000491060 CDK8P49336 464 aa16.34■□□□□ 0.21
TRAIP-211ENST00000491060 HERVK_113P62684 666 aa16.34■□□□□ 0.21
TRAIP-211ENST00000491060 CTR9Q6PD62 1173 aa16.34■□□□□ 0.21
TRAIP-211ENST00000491060 CCDC129Q6ZRS4 1044 aa16.34■□□□□ 0.21
TRAIP-211ENST00000491060 CCAR1Q8IX12 1150 aaKnown RBP16.34■□□□□ 0.21
TRAIP-211ENST00000491060 SPICE1Q8N0Z3 855 aa16.34■□□□□ 0.21
TRAIP-211ENST00000491060 PI4K2BQ8TCG2 481 aa16.34■□□□□ 0.21
TRAIP-211ENST00000491060 COA7Q96BR5 231 aa16.34■□□□□ 0.21
TRAIP-211ENST00000491060 CHMP4CQ96CF2 233 aa16.34■□□□□ 0.21
TRAIP-211ENST00000491060 PLXNB2O15031 1838 aa16.33■□□□□ 0.21
TRAIP-211ENST00000491060 A0A1W2PRG0 241 aa16.33■□□□□ 0.2
TRAIP-211ENST00000491060 GPAA1O43292 621 aa16.33■□□□□ 0.2
TRAIP-211ENST00000491060 GNRH1P01148 92 aa16.33■□□□□ 0.2
TRAIP-211ENST00000491060 CYP2B6P20813 491 aa16.33■□□□□ 0.2
TRAIP-211ENST00000491060 TDO2P48775 406 aa16.33■□□□□ 0.2
TRAIP-211ENST00000491060 GABPAQ06546 454 aa16.33■□□□□ 0.2
TRAIP-211ENST00000491060 FAM110CQ1W6H9 321 aa16.33■□□□□ 0.2
TRAIP-211ENST00000491060 APPBP2Q92624 585 aa16.33■□□□□ 0.2
TRAIP-211ENST00000491060 STRBPQ96SI9 672 aaKnown RBP16.33■□□□□ 0.2
TRAIP-211ENST00000491060 TANGO6Q9C0B7 1094 aa16.33■□□□□ 0.2
TRAIP-211ENST00000491060 UNC93B1Q9H1C4 597 aa16.33■□□□□ 0.2
TRAIP-211ENST00000491060 RPAP3Q9H6T3 665 aaPredicted RBP16.33■□□□□ 0.2
TRAIP-211ENST00000491060 ATP8A2Q9NTI2 1148 aa16.33■□□□□ 0.2
TRAIP-211ENST00000491060 PRDM1O75626 825 aa16.32■□□□□ 0.2
TRAIP-211ENST00000491060 CCL5P13501 91 aa16.32■□□□□ 0.2
TRAIP-211ENST00000491060 VCAM1P19320 739 aa16.32■□□□□ 0.2
TRAIP-211ENST00000491060 GCLCP48506 637 aaPredicted RBP16.32■□□□□ 0.2
TRAIP-211ENST00000491060 PRMT2P55345 433 aa16.32■□□□□ 0.2
TRAIP-211ENST00000491060 Q3C1V9 767 aa16.32■□□□□ 0.2
TRAIP-211ENST00000491060 KIAA1755Q5JYT7 1200 aa16.32■□□□□ 0.2
TRAIP-211ENST00000491060 C12orf60Q5U649 245 aa16.32■□□□□ 0.2
TRAIP-211ENST00000491060 TTC41PQ6P2S7 1318 aa16.32■□□□□ 0.2
TRAIP-211ENST00000491060 TMED8Q6PL24 325 aaPredicted RBP16.32■□□□□ 0.2
TRAIP-211ENST00000491060 RNF208Q9H0X6 261 aa16.32■□□□□ 0.2
TRAIP-211ENST00000491060 GINM1Q9NU53 330 aa16.32■□□□□ 0.2
TRAIP-211ENST00000491060 GSG1L2A8MUP6 293 aa16.31■□□□□ 0.2
TRAIP-211ENST00000491060 USP17L15C9J2P7 530 aa16.31■□□□□ 0.2
TRAIP-211ENST00000491060 USP17L13C9JLJ4 530 aa16.31■□□□□ 0.2
TRAIP-211ENST00000491060 USP17L11C9JVI0 530 aa16.31■□□□□ 0.2
TRAIP-211ENST00000491060 USP17L18D6R9N7 530 aa16.31■□□□□ 0.2
TRAIP-211ENST00000491060 USP17L22D6RA61 530 aa16.31■□□□□ 0.2
TRAIP-211ENST00000491060 USP17L17D6RBQ6 530 aa16.31■□□□□ 0.2
TRAIP-211ENST00000491060 USP17L19D6RCP7 530 aa16.31■□□□□ 0.2
TRAIP-211ENST00000491060 USP17L20D6RJB6 530 aa16.31■□□□□ 0.2
TRAIP-211ENST00000491060 GLRX3O76003 335 aaKnown RBP16.31■□□□□ 0.2
TRAIP-211ENST00000491060 IGHDP01880 384 aa16.31■□□□□ 0.2
TRAIP-211ENST00000491060 INHAP05111 366 aa16.31■□□□□ 0.2
TRAIP-211ENST00000491060 ICA1Q05084 483 aa16.31■□□□□ 0.2
TRAIP-211ENST00000491060 USP17L24Q0WX57 530 aa16.31■□□□□ 0.2
TRAIP-211ENST00000491060 TRIM32Q13049 653 aa16.31■□□□□ 0.2
TRAIP-211ENST00000491060 GPRC5AQ8NFJ5 357 aa16.31■□□□□ 0.2
TRAIP-211ENST00000491060 PORCNQ9H237 461 aa16.31■□□□□ 0.2
TRAIP-211ENST00000491060 EPB41L4AQ9HCS5 686 aaPredicted RBP16.31■□□□□ 0.2
TRAIP-211ENST00000491060 RBPJLQ9UBG7 517 aa16.31■□□□□ 0.2
TRAIP-211ENST00000491060 SWAP70Q9UH65 585 aa16.31■□□□□ 0.2
TRAIP-211ENST00000491060 MYH4Q9Y623 1939 aa16.31■□□□□ 0.2
TRAIP-211ENST00000491060 TNRC18O15417 2968 aaPredicted RBP16.3■□□□□ 0.2
TRAIP-211ENST00000491060 USP14P54578 494 aa16.3■□□□□ 0.2
TRAIP-211ENST00000491060 UBXN2AP68543 259 aa16.3■□□□□ 0.2
TRAIP-211ENST00000491060 POTEEQ6S8J3 1075 aa16.3■□□□□ 0.2
TRAIP-211ENST00000491060 TMEM179Q6ZVK1 233 aa16.3■□□□□ 0.2
TRAIP-211ENST00000491060 COL11A1P12107 1806 aaPredicted RBP16.3■□□□□ 0.2
TRAIP-211ENST00000491060 HTTP42858 3142 aa16.3■□□□□ 0.2
TRAIP-211ENST00000491060 TRIM6-TRIM34B2RNG4 842 aa16.29■□□□□ 0.2
TRAIP-211ENST00000491060 HOXA7P31268 230 aaPredicted RBP16.29■□□□□ 0.2
TRAIP-211ENST00000491060 ERVK-9P63128 1117 aa16.29■□□□□ 0.2
TRAIP-211ENST00000491060 ERVK-24P63145 666 aa16.29■□□□□ 0.2
TRAIP-211ENST00000491060 PLS1Q14651 629 aa16.29■□□□□ 0.2
TRAIP-211ENST00000491060 CATSPERGQ6ZRH7 1159 aa16.29■□□□□ 0.2
TRAIP-211ENST00000491060 C16orf86Q6ZW13 317 aa16.29■□□□□ 0.2
TRAIP-211ENST00000491060 SLAIN1Q8ND83 568 aa16.29■□□□□ 0.2
TRAIP-211ENST00000491060 RILPL2Q969X0 211 aa16.29■□□□□ 0.2
TRAIP-211ENST00000491060 GCC1Q96CN9 775 aa16.29■□□□□ 0.2
TRAIP-211ENST00000491060 KIAA1683Q9H0B3 1180 aa16.29■□□□□ 0.2
TRAIP-211ENST00000491060 MKNK2Q9HBH9 465 aa16.29■□□□□ 0.2
TRAIP-211ENST00000491060 ARHGEF10LQ9HCE6 1279 aa16.29■□□□□ 0.2
TRAIP-211ENST00000491060 ARPP21Q9UBL0 812 aaPredicted RBP16.29■□□□□ 0.2
TRAIP-211ENST00000491060 CNMDO75829 334 aa16.28■□□□□ 0.2
TRAIP-211ENST00000491060 ZFYP08048 801 aaPredicted RBP16.28■□□□□ 0.2
TRAIP-211ENST00000491060 EEF2P13639 858 aaKnown RBP16.28■□□□□ 0.2
TRAIP-211ENST00000491060 HDAC1Q13547 482 aaPredicted RBP16.28■□□□□ 0.2
TRAIP-211ENST00000491060 RWDD1Q9H446 243 aaPredicted RBP16.28■□□□□ 0.2
TRAIP-211ENST00000491060 BTBD7Q9P203 1132 aa16.28■□□□□ 0.2
TRAIP-211ENST00000491060 ISY1Q9ULR0 285 aaKnown RBP16.28■□□□□ 0.2
TRAIP-211ENST00000491060 PDE4DIPQ5VU43 2346 aa16.28■□□□□ 0.2
TRAIP-211ENST00000491060 CENPFP49454 3210 aa16.27■□□□□ 0.2
TRAIP-211ENST00000491060 SLC4A3P48751 1232 aa16.27■□□□□ 0.2
TRAIP-211ENST00000491060 PDE1AP54750 535 aa16.27■□□□□ 0.2
TRAIP-211ENST00000491060 IFNL3Q8IZI9 196 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms