RNA–Protein interactions for RNA: ENST00000490990.1

RGPD6-211, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 4

Gene RGPD6, Length 541 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-211ENST00000490990 SRRDQ9UH36 339 aa25.09■■□□□ 1.61
RGPD6-211ENST00000490990 HOXD10P28358 340 aa25.08■■□□□ 1.61
RGPD6-211ENST00000490990 GCLCP48506 637 aaPredicted RBP25.08■■□□□ 1.61
RGPD6-211ENST00000490990 CDK8P49336 464 aa25.08■■□□□ 1.61
RGPD6-211ENST00000490990 ACER1Q8TDN7 264 aa25.08■■□□□ 1.61
RGPD6-211ENST00000490990 KIAA1683Q9H0B3 1180 aa25.08■■□□□ 1.61
RGPD6-211ENST00000490990 MPHOSPH10O00566 681 aaKnown RBP25.07■■□□□ 1.6
RGPD6-211ENST00000490990 GNAT2P19087 354 aa25.07■■□□□ 1.6
RGPD6-211ENST00000490990 USP14P54578 494 aa25.07■■□□□ 1.6
RGPD6-211ENST00000490990 IRX3P78415 501 aaPredicted RBP25.07■■□□□ 1.6
RGPD6-211ENST00000490990 SBK1Q52WX2 424 aa25.07■■□□□ 1.6
RGPD6-211ENST00000490990 ZMYM1Q5SVZ6 1142 aa25.07■■□□□ 1.6
RGPD6-211ENST00000490990 TMEM179Q6ZVK1 233 aa25.07■■□□□ 1.6
RGPD6-211ENST00000490990 DOCK3Q8IZD9 2030 aa25.07■■□□□ 1.6
RGPD6-211ENST00000490990 RBBP6Q7Z6E9 1792 aaKnown RBP25.06■■□□□ 1.6
RGPD6-211ENST00000490990 ZYXQ15942 572 aaKnown RBP25.06■■□□□ 1.6
RGPD6-211ENST00000490990 SLC9C1Q4G0N8 1177 aa25.06■■□□□ 1.6
RGPD6-211ENST00000490990 B4GALNT3Q6L9W6 998 aa25.06■■□□□ 1.6
RGPD6-211ENST00000490990 EVI5LQ96CN4 794 aa25.06■■□□□ 1.6
RGPD6-211ENST00000490990 SEC62Q99442 399 aaKnown RBP25.06■■□□□ 1.6
RGPD6-211ENST00000490990 EPB41L4AQ9HCS5 686 aaPredicted RBP25.06■■□□□ 1.6
RGPD6-211ENST00000490990 MYPNQ86TC9 1320 aa25.06■■□□□ 1.6
RGPD6-211ENST00000490990 AKR1B1P15121 316 aa25.05■■□□□ 1.6
RGPD6-211ENST00000490990 NUCB1Q02818 461 aa25.05■■□□□ 1.6
RGPD6-211ENST00000490990 MLLT1Q03111 559 aaPredicted RBP25.05■■□□□ 1.6
RGPD6-211ENST00000490990 CHD1LQ86WJ1 897 aa25.05■■□□□ 1.6
RGPD6-211ENST00000490990 ZNF333Q96JL9 665 aa25.05■■□□□ 1.6
RGPD6-211ENST00000490990 CCDC17Q96LX7 622 aa25.05■■□□□ 1.6
RGPD6-211ENST00000490990 P2RX7Q99572 595 aaKnown RBP25.05■■□□□ 1.6
RGPD6-211ENST00000490990 HERVK_113P62684 666 aa25.04■■□□□ 1.6
RGPD6-211ENST00000490990 PRKCZQ05513 592 aa25.04■■□□□ 1.6
RGPD6-211ENST00000490990 NBPF11Q86T75 865 aa25.04■■□□□ 1.6
RGPD6-211ENST00000490990 MORF4L1Q9UBU8 362 aa25.04■■□□□ 1.6
RGPD6-211ENST00000490990 ROBO3Q96MS0 1386 aa25.04■■□□□ 1.6
RGPD6-211ENST00000490990 KIAA0100Q14667 2235 aaKnown RBP25.03■■□□□ 1.6
RGPD6-211ENST00000490990 A0A1W2PRG0 241 aa25.03■■□□□ 1.6
RGPD6-211ENST00000490990 PATL2C9JE40 543 aaKnown RBP25.03■■□□□ 1.6
RGPD6-211ENST00000490990 VCAM1P19320 739 aa25.03■■□□□ 1.6
RGPD6-211ENST00000490990 IFNL3Q8IZI9 196 aa25.02■■□□□ 1.6
RGPD6-211ENST00000490990 RAET1EQ8TD07 263 aa25.02■■□□□ 1.6
RGPD6-211ENST00000490990 SH3TC2Q8TF17 1288 aa25.02■■□□□ 1.6
RGPD6-211ENST00000490990 GABRQQ9UN88 632 aa25.02■■□□□ 1.6
RGPD6-211ENST00000490990 GREB1LQ9C091 1923 aaPredicted RBP25.02■■□□□ 1.6
RGPD6-211ENST00000490990 USP17L15C9J2P7 530 aa25.01■■□□□ 1.59
RGPD6-211ENST00000490990 USP17L13C9JLJ4 530 aa25.01■■□□□ 1.59
RGPD6-211ENST00000490990 USP17L11C9JVI0 530 aa25.01■■□□□ 1.59
RGPD6-211ENST00000490990 USP17L18D6R9N7 530 aa25.01■■□□□ 1.59
RGPD6-211ENST00000490990 USP17L22D6RA61 530 aa25.01■■□□□ 1.59
RGPD6-211ENST00000490990 USP17L17D6RBQ6 530 aa25.01■■□□□ 1.59
RGPD6-211ENST00000490990 USP17L19D6RCP7 530 aa25.01■■□□□ 1.59
RGPD6-211ENST00000490990 USP17L20D6RJB6 530 aa25.01■■□□□ 1.59
RGPD6-211ENST00000490990 TNPO2O14787 897 aaKnown RBP25.01■■□□□ 1.59
RGPD6-211ENST00000490990 APPP05067 770 aa25.01■■□□□ 1.59
RGPD6-211ENST00000490990 TDO2P48775 406 aa25.01■■□□□ 1.59
RGPD6-211ENST00000490990 IRX6P78412 446 aaPredicted RBP25.01■■□□□ 1.59
RGPD6-211ENST00000490990 USP17L24Q0WX57 530 aa25.01■■□□□ 1.59
RGPD6-211ENST00000490990 SIAH1Q8IUQ4 282 aa25.01■■□□□ 1.59
RGPD6-211ENST00000490990 PLEKHM2Q8IWE5 1019 aa25.01■■□□□ 1.59
RGPD6-211ENST00000490990 GTF3C2Q8WUA4 911 aaPredicted RBP25.01■■□□□ 1.59
RGPD6-211ENST00000490990 TXNRD2Q9NNW7 524 aa25.01■■□□□ 1.59
RGPD6-211ENST00000490990 MINDY4BA8MYZ0 360 aa25■■□□□ 1.59
RGPD6-211ENST00000490990 ICA1Q05084 483 aa25■■□□□ 1.59
RGPD6-211ENST00000490990 POTEEQ6S8J3 1075 aa25■■□□□ 1.59
RGPD6-211ENST00000490990 CATSPERGQ6ZRH7 1159 aa25■■□□□ 1.59
RGPD6-211ENST00000490990 CLEC10AQ8IUN9 316 aa25■■□□□ 1.59
RGPD6-211ENST00000490990 OSBPL3Q9H4L5 887 aa25■■□□□ 1.59
RGPD6-211ENST00000490990 RBPJLQ9UBG7 517 aa25■■□□□ 1.59
RGPD6-211ENST00000490990 POTEFA5A3E0 1075 aa24.99■■□□□ 1.59
RGPD6-211ENST00000490990 GRK4P32298 578 aa24.99■■□□□ 1.59
RGPD6-211ENST00000490990 TICAM2Q86XR7 235 aa24.99■■□□□ 1.59
RGPD6-211ENST00000490990 NACAP1Q9BZK3 213 aa24.99■■□□□ 1.59
RGPD6-211ENST00000490990 PEX10O60683 326 aa24.98■■□□□ 1.59
RGPD6-211ENST00000490990 FLT3LGP49771 235 aa24.98■■□□□ 1.59
RGPD6-211ENST00000490990 CCDC129Q6ZRS4 1044 aa24.98■■□□□ 1.59
RGPD6-211ENST00000490990 GPRC5AQ8NFJ5 357 aa24.98■■□□□ 1.59
RGPD6-211ENST00000490990 COA7Q96BR5 231 aa24.98■■□□□ 1.59
RGPD6-211ENST00000490990 RPAP3Q9H6T3 665 aaPredicted RBP24.98■■□□□ 1.59
RGPD6-211ENST00000490990 ARHGEF10LQ9HCE6 1279 aa24.98■■□□□ 1.59
RGPD6-211ENST00000490990 TMX2Q9Y320 296 aa24.98■■□□□ 1.59
RGPD6-211ENST00000490990 BRCA2P51587 3418 aa24.97■■□□□ 1.59
RGPD6-211ENST00000490990 FOXP2O15409 715 aa24.97■■□□□ 1.59
RGPD6-211ENST00000490990 RASA1P20936 1047 aa24.97■■□□□ 1.59
RGPD6-211ENST00000490990 IRF5Q13568 498 aa24.97■■□□□ 1.59
RGPD6-211ENST00000490990 STK11IPQ8N1F8 1099 aa24.97■■□□□ 1.59
RGPD6-211ENST00000490990 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.97■■□□□ 1.59
RGPD6-211ENST00000490990 KANSL2Q9H9L4 492 aa24.97■■□□□ 1.59
RGPD6-211ENST00000490990 HELLSQ9NRZ9 838 aa24.97■■□□□ 1.59
RGPD6-211ENST00000490990 RLFQ13129 1914 aa24.96■■□□□ 1.59
RGPD6-211ENST00000490990 PLXNB2O15031 1838 aa24.96■■□□□ 1.59
RGPD6-211ENST00000490990 ERVK-9P63128 1117 aa24.96■■□□□ 1.59
RGPD6-211ENST00000490990 ERVK-24P63145 666 aa24.96■■□□□ 1.59
RGPD6-211ENST00000490990 KIAA1755Q5JYT7 1200 aa24.96■■□□□ 1.59
RGPD6-211ENST00000490990 LBX2Q6XYB7 198 aa24.96■■□□□ 1.59
RGPD6-211ENST00000490990 NAPBQ9H115 298 aa24.96■■□□□ 1.59
RGPD6-211ENST00000490990 SH2D4AQ9H788 454 aa24.96■■□□□ 1.59
RGPD6-211ENST00000490990 MKNK2Q9HBH9 465 aa24.96■■□□□ 1.59
RGPD6-211ENST00000490990 TRIM6-TRIM34B2RNG4 842 aa24.95■■□□□ 1.58
RGPD6-211ENST00000490990 EEF2P13639 858 aaKnown RBP24.95■■□□□ 1.58
RGPD6-211ENST00000490990 Q3C1V9 767 aa24.95■■□□□ 1.58
RGPD6-211ENST00000490990 SLAIN1Q8ND83 568 aa24.95■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms