RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 RAB3GAP1Q15042 981 aa18.25■□□□□ 0.51
COL27A1-206ENST00000490831 TMEM179Q6ZVK1 233 aa18.25■□□□□ 0.51
COL27A1-206ENST00000490831 CHD1LQ86WJ1 897 aa18.25■□□□□ 0.51
COL27A1-206ENST00000490831 EVI5LQ96CN4 794 aa18.25■□□□□ 0.51
COL27A1-206ENST00000490831 CCDC17Q96LX7 622 aa18.25■□□□□ 0.51
COL27A1-206ENST00000490831 LNPKQ9C0E8 428 aa18.25■□□□□ 0.51
COL27A1-206ENST00000490831 FCGRTP55899 365 aa18.24■□□□□ 0.51
COL27A1-206ENST00000490831 SEPT2Q15019 361 aa18.24■□□□□ 0.51
COL27A1-206ENST00000490831 ACER1Q8TDN7 264 aa18.24■□□□□ 0.51
COL27A1-206ENST00000490831 EPB41L4AQ9HCS5 686 aaPredicted RBP18.24■□□□□ 0.51
COL27A1-206ENST00000490831 MORF4L1Q9UBU8 362 aa18.24■□□□□ 0.51
COL27A1-206ENST00000490831 ROBO3Q96MS0 1386 aa18.24■□□□□ 0.51
COL27A1-206ENST00000490831 MGAMO43451 1857 aa18.24■□□□□ 0.51
COL27A1-206ENST00000490831 FMNL1O95466 1100 aaPredicted RBP18.23■□□□□ 0.51
COL27A1-206ENST00000490831 SOX10P56693 466 aa18.23■□□□□ 0.51
COL27A1-206ENST00000490831 ANKRD13CQ8N6S4 541 aa18.23■□□□□ 0.51
COL27A1-206ENST00000490831 SEC62Q99442 399 aaKnown RBP18.23■□□□□ 0.51
COL27A1-206ENST00000490831 OSBPL3Q9H4L5 887 aa18.23■□□□□ 0.51
COL27A1-206ENST00000490831 MYH8P13535 1937 aa18.23■□□□□ 0.51
COL27A1-206ENST00000490831 PATL2C9JE40 543 aaKnown RBP18.22■□□□□ 0.51
COL27A1-206ENST00000490831 AKR1B1P15121 316 aa18.22■□□□□ 0.51
COL27A1-206ENST00000490831 IRX3P78415 501 aaPredicted RBP18.22■□□□□ 0.51
COL27A1-206ENST00000490831 ZNF333Q96JL9 665 aa18.22■□□□□ 0.51
COL27A1-206ENST00000490831 P2RX7Q99572 595 aaKnown RBP18.22■□□□□ 0.51
COL27A1-206ENST00000490831 FEZ1Q99689 392 aa18.22■□□□□ 0.51
COL27A1-206ENST00000490831 A0A1W2PRG0 241 aa18.21■□□□□ 0.51
COL27A1-206ENST00000490831 MPHOSPH10O00566 681 aaKnown RBP18.21■□□□□ 0.51
COL27A1-206ENST00000490831 HERVK_113P62684 666 aa18.21■□□□□ 0.51
COL27A1-206ENST00000490831 SLC9C1Q4G0N8 1177 aa18.21■□□□□ 0.51
COL27A1-206ENST00000490831 B4GALNT3Q6L9W6 998 aa18.21■□□□□ 0.51
COL27A1-206ENST00000490831 NBPF11Q86T75 865 aa18.21■□□□□ 0.51
COL27A1-206ENST00000490831 SIAH1Q8IUQ4 282 aa18.21■□□□□ 0.51
COL27A1-206ENST00000490831 PLEKHM2Q8IWE5 1019 aa18.21■□□□□ 0.51
COL27A1-206ENST00000490831 GTF3C2Q8WUA4 911 aaPredicted RBP18.21■□□□□ 0.51
COL27A1-206ENST00000490831 MYPNQ86TC9 1320 aa18.21■□□□□ 0.51
COL27A1-206ENST00000490831 USP17L15C9J2P7 530 aa18.2■□□□□ 0.5
COL27A1-206ENST00000490831 USP17L13C9JLJ4 530 aa18.2■□□□□ 0.5
COL27A1-206ENST00000490831 USP17L11C9JVI0 530 aa18.2■□□□□ 0.5
COL27A1-206ENST00000490831 USP17L18D6R9N7 530 aa18.2■□□□□ 0.5
COL27A1-206ENST00000490831 USP17L22D6RA61 530 aa18.2■□□□□ 0.5
COL27A1-206ENST00000490831 USP17L17D6RBQ6 530 aa18.2■□□□□ 0.5
COL27A1-206ENST00000490831 USP17L19D6RCP7 530 aa18.2■□□□□ 0.5
COL27A1-206ENST00000490831 USP17L20D6RJB6 530 aa18.2■□□□□ 0.5
COL27A1-206ENST00000490831 VCAM1P19320 739 aa18.2■□□□□ 0.5
COL27A1-206ENST00000490831 USP17L24Q0WX57 530 aa18.2■□□□□ 0.5
COL27A1-206ENST00000490831 CATSPERGQ6ZRH7 1159 aa18.2■□□□□ 0.5
COL27A1-206ENST00000490831 IFNL3Q8IZI9 196 aa18.2■□□□□ 0.5
COL27A1-206ENST00000490831 RBBP6Q7Z6E9 1792 aaKnown RBP18.19■□□□□ 0.5
COL27A1-206ENST00000490831 GREB1LQ9C091 1923 aaPredicted RBP18.19■□□□□ 0.5
COL27A1-206ENST00000490831 FOXP2O15409 715 aa18.19■□□□□ 0.5
COL27A1-206ENST00000490831 MLLT1Q03111 559 aaPredicted RBP18.19■□□□□ 0.5
COL27A1-206ENST00000490831 PRKCZQ05513 592 aa18.19■□□□□ 0.5
COL27A1-206ENST00000490831 ZYXQ15942 572 aaKnown RBP18.19■□□□□ 0.5
COL27A1-206ENST00000490831 POTEEQ6S8J3 1075 aa18.19■□□□□ 0.5
COL27A1-206ENST00000490831 LBX2Q6XYB7 198 aa18.19■□□□□ 0.5
COL27A1-206ENST00000490831 NACAP1Q9BZK3 213 aa18.19■□□□□ 0.5
COL27A1-206ENST00000490831 TXNRD2Q9NNW7 524 aa18.19■□□□□ 0.5
COL27A1-206ENST00000490831 HELLSQ9NRZ9 838 aa18.19■□□□□ 0.5
COL27A1-206ENST00000490831 RBPJLQ9UBG7 517 aa18.19■□□□□ 0.5
COL27A1-206ENST00000490831 TMX2Q9Y320 296 aa18.19■□□□□ 0.5
COL27A1-206ENST00000490831 BRCA2P51587 3418 aa18.19■□□□□ 0.5
COL27A1-206ENST00000490831 KIAA0100Q14667 2235 aaKnown RBP18.18■□□□□ 0.5
COL27A1-206ENST00000490831 TNPO2O14787 897 aaKnown RBP18.18■□□□□ 0.5
COL27A1-206ENST00000490831 ECM2O94769 699 aaPredicted RBP18.18■□□□□ 0.5
COL27A1-206ENST00000490831 RASA1P20936 1047 aa18.18■□□□□ 0.5
COL27A1-206ENST00000490831 TDO2P48775 406 aa18.18■□□□□ 0.5
COL27A1-206ENST00000490831 ICA1Q05084 483 aa18.18■□□□□ 0.5
COL27A1-206ENST00000490831 IRF5Q13568 498 aa18.18■□□□□ 0.5
COL27A1-206ENST00000490831 RAET1EQ8TD07 263 aa18.18■□□□□ 0.5
COL27A1-206ENST00000490831 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.18■□□□□ 0.5
COL27A1-206ENST00000490831 KANSL2Q9H9L4 492 aa18.18■□□□□ 0.5
COL27A1-206ENST00000490831 GABRQQ9UN88 632 aa18.18■□□□□ 0.5
COL27A1-206ENST00000490831 DOCK3Q8IZD9 2030 aa18.17■□□□□ 0.5
COL27A1-206ENST00000490831 MINDY4BA8MYZ0 360 aa18.17■□□□□ 0.5
COL27A1-206ENST00000490831 APPP05067 770 aa18.17■□□□□ 0.5
COL27A1-206ENST00000490831 CLEC10AQ8IUN9 316 aa18.17■□□□□ 0.5
COL27A1-206ENST00000490831 GPRC5AQ8NFJ5 357 aa18.17■□□□□ 0.5
COL27A1-206ENST00000490831 SH3TC2Q8TF17 1288 aa18.17■□□□□ 0.5
COL27A1-206ENST00000490831 LPAR1Q92633 364 aa18.17■□□□□ 0.5
COL27A1-206ENST00000490831 COA7Q96BR5 231 aa18.17■□□□□ 0.5
COL27A1-206ENST00000490831 SH2D4AQ9H788 454 aa18.17■□□□□ 0.5
COL27A1-206ENST00000490831 ARHGEF10LQ9HCE6 1279 aa18.17■□□□□ 0.5
COL27A1-206ENST00000490831 GRK4P32298 578 aa18.16■□□□□ 0.5
COL27A1-206ENST00000490831 FLT3LGP49771 235 aa18.16■□□□□ 0.5
COL27A1-206ENST00000490831 ERVK-9P63128 1117 aa18.16■□□□□ 0.5
COL27A1-206ENST00000490831 ERVK-24P63145 666 aa18.16■□□□□ 0.5
COL27A1-206ENST00000490831 IRX6P78412 446 aaPredicted RBP18.16■□□□□ 0.5
COL27A1-206ENST00000490831 KIAA1755Q5JYT7 1200 aa18.16■□□□□ 0.5
COL27A1-206ENST00000490831 CCDC129Q6ZRS4 1044 aa18.16■□□□□ 0.5
COL27A1-206ENST00000490831 RPAP3Q9H6T3 665 aaPredicted RBP18.16■□□□□ 0.5
COL27A1-206ENST00000490831 ZNF287Q9HBT7 754 aa18.16■□□□□ 0.5
COL27A1-206ENST00000490831 RABGAP1Q9Y3P9 1069 aa18.16■□□□□ 0.5
COL27A1-206ENST00000490831 POTEFA5A3E0 1075 aa18.15■□□□□ 0.5
COL27A1-206ENST00000490831 CNMDO75829 334 aa18.15■□□□□ 0.5
COL27A1-206ENST00000490831 ALX1Q15699 326 aa18.15■□□□□ 0.5
COL27A1-206ENST00000490831 Q3C1V9 767 aa18.15■□□□□ 0.5
COL27A1-206ENST00000490831 SLAIN1Q8ND83 568 aa18.15■□□□□ 0.5
COL27A1-206ENST00000490831 PXYLP1Q8TE99 480 aa18.15■□□□□ 0.5
COL27A1-206ENST00000490831 FAM227BQ96M60 508 aa18.15■□□□□ 0.5
COL27A1-206ENST00000490831 NAPBQ9H115 298 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms