RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 CDAN1Q8IWY9 1227 aa12.86□□□□□ -0.35
VARS2-210ENST00000490699 MB21D2Q8IYB1 491 aaPredicted RBP12.86□□□□□ -0.35
VARS2-210ENST00000490699 SCYL3Q8IZE3 742 aa12.86□□□□□ -0.35
VARS2-210ENST00000490699 NEDD1Q8NHV4 660 aa12.86□□□□□ -0.35
VARS2-210ENST00000490699 IL17RAQ96F46 866 aa12.86□□□□□ -0.35
VARS2-210ENST00000490699 ZSCAN10Q96SZ4 725 aaPredicted RBP12.86□□□□□ -0.35
VARS2-210ENST00000490699 UPF3BQ9BZI7 483 aaKnown RBP12.86□□□□□ -0.35
VARS2-210ENST00000490699 DNAJC18Q9H819 358 aa12.86□□□□□ -0.35
VARS2-210ENST00000490699 ZSWIM5Q9P217 1185 aa12.86□□□□□ -0.35
VARS2-210ENST00000490699 STX8Q9UNK0 236 aa12.86□□□□□ -0.35
VARS2-210ENST00000490699 DOCK1Q14185 1865 aa12.85□□□□□ -0.35
VARS2-210ENST00000490699 TRPM7Q96QT4 1865 aa12.85□□□□□ -0.35
VARS2-210ENST00000490699 TTLL1O95922 423 aa12.85□□□□□ -0.35
VARS2-210ENST00000490699 GH2P01242 217 aa12.85□□□□□ -0.35
VARS2-210ENST00000490699 AKR1B1P15121 316 aa12.85□□□□□ -0.35
VARS2-210ENST00000490699 ICA1Q05084 483 aa12.85□□□□□ -0.35
VARS2-210ENST00000490699 CHMP4CQ96CF2 233 aa12.85□□□□□ -0.35
VARS2-210ENST00000490699 KLRG1Q96E93 195 aa12.85□□□□□ -0.35
VARS2-210ENST00000490699 TTC14Q96N46 770 aa12.85□□□□□ -0.35
VARS2-210ENST00000490699 FEZ1Q99689 392 aa12.85□□□□□ -0.35
VARS2-210ENST00000490699 KAT14Q9H8E8 782 aa12.85□□□□□ -0.35
VARS2-210ENST00000490699 INCENPQ9NQS7 918 aa12.85□□□□□ -0.35
VARS2-210ENST00000490699 TCP11L1Q9NUJ3 509 aa12.85□□□□□ -0.35
VARS2-210ENST00000490699 ZBTB21Q9ULJ3 1066 aa12.85□□□□□ -0.35
VARS2-210ENST00000490699 NAP1L2Q9ULW6 460 aaPredicted RBP12.85□□□□□ -0.35
VARS2-210ENST00000490699 FARP1Q9Y4F1 1045 aaPredicted RBP12.85□□□□□ -0.35
VARS2-210ENST00000490699 TNKSO95271 1327 aa12.85□□□□□ -0.35
VARS2-210ENST00000490699 ATAD5Q96QE3 1844 aa12.84□□□□□ -0.35
VARS2-210ENST00000490699 USP17L5A8MUK1 530 aa12.84□□□□□ -0.35
VARS2-210ENST00000490699 USP2O75604 605 aaPredicted RBP12.84□□□□□ -0.35
VARS2-210ENST00000490699 NOL9Q5SY16 702 aaKnown RBP12.84□□□□□ -0.35
VARS2-210ENST00000490699 POTEGQ6S5H5 508 aa12.84□□□□□ -0.35
VARS2-210ENST00000490699 Q6ZUG5 572 aa12.84□□□□□ -0.35
VARS2-210ENST00000490699 CATIPQ7Z7H3 387 aa12.84□□□□□ -0.35
VARS2-210ENST00000490699 DGKHQ86XP1 1220 aa12.84□□□□□ -0.35
VARS2-210ENST00000490699 ZKSCAN3Q9BRR0 538 aa12.84□□□□□ -0.35
VARS2-210ENST00000490699 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.84□□□□□ -0.35
VARS2-210ENST00000490699 ZNF112Q9UJU3 913 aa12.84□□□□□ -0.35
VARS2-210ENST00000490699 TAF6LQ9Y6J9 622 aa12.84□□□□□ -0.35
VARS2-210ENST00000490699 SSC5DA1L4H1 1573 aa12.84□□□□□ -0.35
VARS2-210ENST00000490699 SMIM22K7EJ46 135 aa12.83□□□□□ -0.36
VARS2-210ENST00000490699 ITGBL1O95965 494 aaPredicted RBP12.83□□□□□ -0.36
VARS2-210ENST00000490699 CALM1P0DP23 149 aa12.83□□□□□ -0.36
VARS2-210ENST00000490699 CALM2P0DP24 149 aa12.83□□□□□ -0.36
VARS2-210ENST00000490699 CALM3P0DP25 149 aa12.83□□□□□ -0.36
VARS2-210ENST00000490699 TOP1P11387 765 aaKnown RBP12.83□□□□□ -0.36
VARS2-210ENST00000490699 LIFRP42702 1097 aa12.83□□□□□ -0.36
VARS2-210ENST00000490699 BECN1Q14457 450 aa12.83□□□□□ -0.36
VARS2-210ENST00000490699 SEPT2Q15019 361 aa12.83□□□□□ -0.36
VARS2-210ENST00000490699 MAP3K11Q16584 847 aa12.83□□□□□ -0.36
VARS2-210ENST00000490699 CYB5R4Q7L1T6 521 aa12.83□□□□□ -0.36
VARS2-210ENST00000490699 CHST3Q7LGC8 479 aa12.83□□□□□ -0.36
VARS2-210ENST00000490699 HSCBQ8IWL3 235 aa12.83□□□□□ -0.36
VARS2-210ENST00000490699 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.83□□□□□ -0.36
VARS2-210ENST00000490699 CEP95Q96GE4 821 aa12.83□□□□□ -0.36
VARS2-210ENST00000490699 GOPCQ9HD26 462 aa12.83□□□□□ -0.36
VARS2-210ENST00000490699 DAXXQ9UER7 740 aaPredicted RBP12.83□□□□□ -0.36
VARS2-210ENST00000490699 ISY1Q9ULR0 285 aaKnown RBP12.83□□□□□ -0.36
VARS2-210ENST00000490699 SYNPO2Q9UMS6 1093 aa12.83□□□□□ -0.36
VARS2-210ENST00000490699 SLC12A7Q9Y666 1083 aa12.83□□□□□ -0.36
VARS2-210ENST00000490699 PHF20L1A8MW92 1017 aa12.82□□□□□ -0.36
VARS2-210ENST00000490699 SH2B2O14492 632 aaPredicted RBP12.82□□□□□ -0.36
VARS2-210ENST00000490699 RAD21O60216 631 aa12.82□□□□□ -0.36
VARS2-210ENST00000490699 INPP5BP32019 993 aa12.82□□□□□ -0.36
VARS2-210ENST00000490699 USP14P54578 494 aa12.82□□□□□ -0.36
VARS2-210ENST00000490699 EXOSC10Q01780 885 aaKnown RBP12.82□□□□□ -0.36
VARS2-210ENST00000490699 VGLL4Q14135 290 aa12.82□□□□□ -0.36
VARS2-210ENST00000490699 ENAHQ8N8S7 591 aaPredicted RBP12.82□□□□□ -0.36
VARS2-210ENST00000490699 ZKSCAN4Q969J2 545 aaPredicted RBP12.82□□□□□ -0.36
VARS2-210ENST00000490699 SLC10A4Q96EP9 437 aa12.82□□□□□ -0.36
VARS2-210ENST00000490699 ALDH8A1Q9H2A2 487 aaPredicted RBP12.82□□□□□ -0.36
VARS2-210ENST00000490699 MTMR4Q9NYA4 1195 aa12.82□□□□□ -0.36
VARS2-210ENST00000490699 NYAP2Q9P242 653 aa12.82□□□□□ -0.36
VARS2-210ENST00000490699 CLIP2Q9UDT6 1046 aa12.82□□□□□ -0.36
VARS2-210ENST00000490699 ABT1Q9ULW3 272 aaKnown RBP12.82□□□□□ -0.36
VARS2-210ENST00000490699 TMEM88BA6NKF7 163 aa12.81□□□□□ -0.36
VARS2-210ENST00000490699 UBE2Q2LH0YL09 131 aa12.81□□□□□ -0.36
VARS2-210ENST00000490699 CPA1P15085 419 aa12.81□□□□□ -0.36
VARS2-210ENST00000490699 KIF5BP33176 963 aa12.81□□□□□ -0.36
VARS2-210ENST00000490699 HUNKP57058 714 aa12.81□□□□□ -0.36
VARS2-210ENST00000490699 CPLX2Q6PUV4 134 aaKnown RBP12.81□□□□□ -0.36
VARS2-210ENST00000490699 DLK2Q6UY11 383 aa12.81□□□□□ -0.36
VARS2-210ENST00000490699 ERO1BQ86YB8 467 aa12.81□□□□□ -0.36
VARS2-210ENST00000490699 FBXL16Q8N461 479 aa12.81□□□□□ -0.36
VARS2-210ENST00000490699 BRF1Q92994 677 aa12.81□□□□□ -0.36
VARS2-210ENST00000490699 ZSCAN31Q96LW9 406 aaPredicted RBP12.81□□□□□ -0.36
VARS2-210ENST00000490699 TCEANC2Q96MN5 208 aa12.81□□□□□ -0.36
VARS2-210ENST00000490699 LRRC2Q9BYS8 371 aa12.81□□□□□ -0.36
VARS2-210ENST00000490699 ELP3Q9H9T3 547 aa12.81□□□□□ -0.36
VARS2-210ENST00000490699 TMOD4Q9NZQ9 345 aa12.81□□□□□ -0.36
VARS2-210ENST00000490699 KLF18A0A0U1RQI7 1052 aa12.8□□□□□ -0.36
VARS2-210ENST00000490699 CCDC196A0A1B0GTZ2 297 aa12.8□□□□□ -0.36
VARS2-210ENST00000490699 GOLGA8BA8MQT2 603 aa12.8□□□□□ -0.36
VARS2-210ENST00000490699 DHX16O60231 1041 aaKnown RBP12.8□□□□□ -0.36
VARS2-210ENST00000490699 NMT2O60551 498 aa12.8□□□□□ -0.36
VARS2-210ENST00000490699 DDAH1O94760 285 aa12.8□□□□□ -0.36
VARS2-210ENST00000490699 HSP90AA1P07900 732 aaKnown RBP12.8□□□□□ -0.36
VARS2-210ENST00000490699 SLURP2P0DP57 97 aa12.8□□□□□ -0.36
VARS2-210ENST00000490699 EEF2P13639 858 aaKnown RBP12.8□□□□□ -0.36
VARS2-210ENST00000490699 PTPRAP18433 802 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms