RNA–Protein interactions for RNA: ENST00000490690.1

SHROOM3-209, Transcript of shroom family member 3, humanhuman

TSL 4

Gene SHROOM3, Length 504 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-209ENST00000490690 KCNH4Q9UQ05 1017 aa23.4■■□□□ 1.34
SHROOM3-209ENST00000490690 NEDD4P46934 1319 aa23.39■■□□□ 1.34
SHROOM3-209ENST00000490690 USP17L10C9JJH3 530 aa23.39■■□□□ 1.33
SHROOM3-209ENST00000490690 SMIM22K7EJ46 135 aa23.39■■□□□ 1.33
SHROOM3-209ENST00000490690 KDM4AO75164 1064 aa23.39■■□□□ 1.33
SHROOM3-209ENST00000490690 CETPP11597 493 aa23.39■■□□□ 1.33
SHROOM3-209ENST00000490690 MCM5P33992 734 aa23.39■■□□□ 1.33
SHROOM3-209ENST00000490690 MAP2K2P36507 400 aa23.39■■□□□ 1.33
SHROOM3-209ENST00000490690 SEPT2Q15019 361 aa23.39■■□□□ 1.33
SHROOM3-209ENST00000490690 FASTKD5Q7L8L6 764 aaKnown RBP23.39■■□□□ 1.33
SHROOM3-209ENST00000490690 FEZ1Q99689 392 aa23.39■■□□□ 1.33
SHROOM3-209ENST00000490690 AFG3L2Q9Y4W6 797 aa23.39■■□□□ 1.33
SHROOM3-209ENST00000490690 B4E1Z4 1266 aa23.38■■□□□ 1.33
SHROOM3-209ENST00000490690 FAM47AQ5JRC9 791 aa23.38■■□□□ 1.33
SHROOM3-209ENST00000490690 OTUD7BQ6GQQ9 843 aa23.38■■□□□ 1.33
SHROOM3-209ENST00000490690 IL27Q8NEV9 243 aa23.38■■□□□ 1.33
SHROOM3-209ENST00000490690 NEK1Q96PY6 1258 aa23.38■■□□□ 1.33
SHROOM3-209ENST00000490690 MTMR4Q9NYA4 1195 aa23.38■■□□□ 1.33
SHROOM3-209ENST00000490690 OTOFQ9HC10 1997 aa23.38■■□□□ 1.33
SHROOM3-209ENST00000490690 MYH8P13535 1937 aa23.37■■□□□ 1.33
SHROOM3-209ENST00000490690 WDR19Q8NEZ3 1342 aa23.37■■□□□ 1.33
SHROOM3-209ENST00000490690 IGKV6D-41A0A0C4DH26 115 aa23.37■■□□□ 1.33
SHROOM3-209ENST00000490690 IRF6O14896 467 aa23.37■■□□□ 1.33
SHROOM3-209ENST00000490690 BACE1P56817 501 aa23.37■■□□□ 1.33
SHROOM3-209ENST00000490690 DGKHQ86XP1 1220 aa23.37■■□□□ 1.33
SHROOM3-209ENST00000490690 KIAA1683Q9H0B3 1180 aa23.37■■□□□ 1.33
SHROOM3-209ENST00000490690 GOPCQ9HD26 462 aa23.37■■□□□ 1.33
SHROOM3-209ENST00000490690 TMOD4Q9NZQ9 345 aa23.37■■□□□ 1.33
SHROOM3-209ENST00000490690 WDR33Q9C0J8 1336 aaKnown RBP23.36■■□□□ 1.33
SHROOM3-209ENST00000490690 GUCY1A2P33402 732 aa23.36■■□□□ 1.33
SHROOM3-209ENST00000490690 SPP2Q13103 211 aa23.36■■□□□ 1.33
SHROOM3-209ENST00000490690 PABPC4Q13310 644 aaKnown RBP eCLIP23.36■■□□□ 1.33
SHROOM3-209ENST00000490690 CYP4F22Q6NT55 531 aa23.36■■□□□ 1.33
SHROOM3-209ENST00000490690 USP17L2Q6R6M4 530 aa23.36■■□□□ 1.33
SHROOM3-209ENST00000490690 TMTC2Q8N394 836 aa23.36■■□□□ 1.33
SHROOM3-209ENST00000490690 PROCA1Q8NCQ7 364 aaPredicted RBP23.36■■□□□ 1.33
SHROOM3-209ENST00000490690 LPAR1Q92633 364 aa23.36■■□□□ 1.33
SHROOM3-209ENST00000490690 CEP95Q96GE4 821 aa23.36■■□□□ 1.33
SHROOM3-209ENST00000490690 TMEM87BQ96K49 555 aa23.36■■□□□ 1.33
SHROOM3-209ENST00000490690 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.36■■□□□ 1.33
SHROOM3-209ENST00000490690 ZSWIM5Q9P217 1185 aa23.36■■□□□ 1.33
SHROOM3-209ENST00000490690 STX8Q9UNK0 236 aa23.36■■□□□ 1.33
SHROOM3-209ENST00000490690 FAM155AB1AL88 458 aaPredicted RBP23.35■■□□□ 1.33
SHROOM3-209ENST00000490690 SH3D19Q5HYK7 790 aa23.35■■□□□ 1.33
SHROOM3-209ENST00000490690 MKL1Q969V6 931 aa23.35■■□□□ 1.33
SHROOM3-209ENST00000490690 ZSCAN10Q96SZ4 725 aaPredicted RBP23.35■■□□□ 1.33
SHROOM3-209ENST00000490690 TM6SF1Q9BZW5 370 aa23.35■■□□□ 1.33
SHROOM3-209ENST00000490690 ZCCHC17Q9NP64 241 aaKnown RBP23.35■■□□□ 1.33
SHROOM3-209ENST00000490690 TMX2Q9Y320 296 aa23.35■■□□□ 1.33
SHROOM3-209ENST00000490690 SNX14Q9Y5W7 946 aa23.35■■□□□ 1.33
SHROOM3-209ENST00000490690 A0A0G2JLL6 359 aaPredicted RBP23.34■■□□□ 1.33
SHROOM3-209ENST00000490690 TRIM75PA6NK02 468 aa23.34■■□□□ 1.33
SHROOM3-209ENST00000490690 EEF2P13639 858 aaKnown RBP23.34■■□□□ 1.33
SHROOM3-209ENST00000490690 ATP2B2Q01814 1243 aa23.34■■□□□ 1.33
SHROOM3-209ENST00000490690 PRRT2Q7Z6L0 340 aaPredicted RBP23.34■■□□□ 1.33
SHROOM3-209ENST00000490690 MB21D2Q8IYB1 491 aaPredicted RBP23.34■■□□□ 1.33
SHROOM3-209ENST00000490690 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.34■■□□□ 1.33
SHROOM3-209ENST00000490690 BACH2Q9BYV9 841 aa23.34■■□□□ 1.33
SHROOM3-209ENST00000490690 INCENPQ9NQS7 918 aa23.34■■□□□ 1.33
SHROOM3-209ENST00000490690 ALDH1A1P00352 501 aa23.33■■□□□ 1.33
SHROOM3-209ENST00000490690 TOP1P11387 765 aaKnown RBP23.33■■□□□ 1.33
SHROOM3-209ENST00000490690 NOVP48745 357 aa23.33■■□□□ 1.33
SHROOM3-209ENST00000490690 JAG1P78504 1218 aa23.33■■□□□ 1.33
SHROOM3-209ENST00000490690 GRM1Q13255 1194 aa23.33■■□□□ 1.33
SHROOM3-209ENST00000490690 BLOC1S2Q6QNY1 142 aa23.33■■□□□ 1.33
SHROOM3-209ENST00000490690 STOX1Q6ZVD7 989 aa23.33■■□□□ 1.33
SHROOM3-209ENST00000490690 DHX32Q7L7V1 743 aaKnown RBP23.33■■□□□ 1.33
SHROOM3-209ENST00000490690 C12orf42Q96LP6 360 aa23.33■■□□□ 1.33
SHROOM3-209ENST00000490690 TACC3Q9Y6A5 838 aa23.33■■□□□ 1.33
SHROOM3-209ENST00000490690 CCL15-CCL14A0A0B4J2E2 113 aa23.32■■□□□ 1.32
SHROOM3-209ENST00000490690 TESPA1A2RU30 521 aaPredicted RBP23.32■■□□□ 1.32
SHROOM3-209ENST00000490690 VEGFBP49765 207 aa23.32■■□□□ 1.32
SHROOM3-209ENST00000490690 MTMR2Q13614 643 aa23.32■■□□□ 1.32
SHROOM3-209ENST00000490690 CCL15Q16663 113 aa23.32■■□□□ 1.32
SHROOM3-209ENST00000490690 RASEFQ8IZ41 740 aa23.32■■□□□ 1.32
SHROOM3-209ENST00000490690 ANKS1AQ92625 1134 aa23.32■■□□□ 1.32
SHROOM3-209ENST00000490690 IL17RAQ96F46 866 aa23.32■■□□□ 1.32
SHROOM3-209ENST00000490690 JAKMIP1Q96N16 626 aaKnown RBP23.32■■□□□ 1.32
SHROOM3-209ENST00000490690 CLIP2Q9UDT6 1046 aa23.32■■□□□ 1.32
SHROOM3-209ENST00000490690 SLC45A1Q9Y2W3 748 aa23.32■■□□□ 1.32
SHROOM3-209ENST00000490690 TNKSO95271 1327 aa23.32■■□□□ 1.32
SHROOM3-209ENST00000490690 ATAD5Q96QE3 1844 aa23.31■■□□□ 1.32
SHROOM3-209ENST00000490690 IFIT3O14879 490 aaKnown RBP23.31■■□□□ 1.32
SHROOM3-209ENST00000490690 GJA5P36382 358 aa23.31■■□□□ 1.32
SHROOM3-209ENST00000490690 IFIT1BQ5T764 474 aaKnown RBP23.31■■□□□ 1.32
SHROOM3-209ENST00000490690 GMCL1P1Q8NEA9 526 aa23.31■■□□□ 1.32
SHROOM3-209ENST00000490690 CNKSR2Q8WXI2 1034 aa23.31■■□□□ 1.32
SHROOM3-209ENST00000490690 C22orf23Q9BZE7 217 aa23.31■■□□□ 1.32
SHROOM3-209ENST00000490690 VCPKMTQ9H867 229 aa23.31■■□□□ 1.32
SHROOM3-209ENST00000490690 KAT14Q9H8E8 782 aa23.31■■□□□ 1.32
SHROOM3-209ENST00000490690 IL17RBQ9NRM6 502 aa23.31■■□□□ 1.32
SHROOM3-209ENST00000490690 PRC1O43663 620 aa23.3■■□□□ 1.32
SHROOM3-209ENST00000490690 SEC24BO95487 1268 aa23.3■■□□□ 1.32
SHROOM3-209ENST00000490690 TM4SF4P48230 202 aa23.3■■□□□ 1.32
SHROOM3-209ENST00000490690 FGD1P98174 961 aa23.3■■□□□ 1.32
SHROOM3-209ENST00000490690 WTAPQ15007 396 aa23.3■■□□□ 1.32
SHROOM3-209ENST00000490690 MS4A4AQ96JQ5 239 aa23.3■■□□□ 1.32
SHROOM3-209ENST00000490690 PNMA3Q9UL41 463 aa23.3■■□□□ 1.32
SHROOM3-209ENST00000490690 CYP46A1Q9Y6A2 500 aa23.3■■□□□ 1.32
SHROOM3-209ENST00000490690 GREB1LQ9C091 1923 aaPredicted RBP23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms