RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 DDRGK1Q96HY6 314 aa12.52□□□□□ -0.41
TTC28-207ENST00000490475 DEFB118Q96PH6 123 aa12.52□□□□□ -0.41
TTC28-207ENST00000490475 P2RX7Q99572 595 aaKnown RBP12.52□□□□□ -0.41
TTC28-207ENST00000490475 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.52□□□□□ -0.41
TTC28-207ENST00000490475 KIAA1683Q9H0B3 1180 aa12.52□□□□□ -0.41
TTC28-207ENST00000490475 CRISPLD2Q9H0B8 497 aa12.52□□□□□ -0.41
TTC28-207ENST00000490475 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.52□□□□□ -0.41
TTC28-207ENST00000490475 CWC22Q9HCG8 908 aaKnown RBP12.52□□□□□ -0.41
TTC28-207ENST00000490475 GJD2Q9UKL4 321 aa12.52□□□□□ -0.41
TTC28-207ENST00000490475 RABGAP1Q9Y3P9 1069 aa12.52□□□□□ -0.41
TTC28-207ENST00000490475 TRIOBPQ9H2D6 2365 aa12.51□□□□□ -0.41
TTC28-207ENST00000490475 EVI5O60447 810 aa12.51□□□□□ -0.41
TTC28-207ENST00000490475 ERVK-9P63128 1117 aa12.51□□□□□ -0.41
TTC28-207ENST00000490475 ERVK-24P63145 666 aa12.51□□□□□ -0.41
TTC28-207ENST00000490475 RIOK1Q9BRS2 568 aaKnown RBP12.51□□□□□ -0.41
TTC28-207ENST00000490475 SWAP70Q9UH65 585 aa12.51□□□□□ -0.41
TTC28-207ENST00000490475 COLQQ9Y215 455 aaPredicted RBP12.51□□□□□ -0.41
TTC28-207ENST00000490475 A0A1W2PPC1 479 aa12.5□□□□□ -0.41
TTC28-207ENST00000490475 PDE6AP16499 860 aa12.5□□□□□ -0.41
TTC28-207ENST00000490475 RGS2P41220 211 aa12.5□□□□□ -0.41
TTC28-207ENST00000490475 RAB3GAP1Q15042 981 aa12.5□□□□□ -0.41
TTC28-207ENST00000490475 ZSCAN25Q6NSZ9 544 aa12.5□□□□□ -0.41
TTC28-207ENST00000490475 LBX2Q6XYB7 198 aa12.5□□□□□ -0.41
TTC28-207ENST00000490475 LRRCC1Q9C099 1032 aa12.5□□□□□ -0.41
TTC28-207ENST00000490475 ANTXR1Q9H6X2 564 aa12.5□□□□□ -0.41
TTC28-207ENST00000490475 EMILIN3Q9NT22 766 aa12.5□□□□□ -0.41
TTC28-207ENST00000490475 ATP8A2Q9NTI2 1148 aa12.5□□□□□ -0.41
TTC28-207ENST00000490475 NAV1Q8NEY1 1877 aa12.49□□□□□ -0.41
TTC28-207ENST00000490475 ZKSCAN1P17029 563 aaPredicted RBP12.49□□□□□ -0.41
TTC28-207ENST00000490475 PLEKHH3Q7Z736 793 aa12.49□□□□□ -0.41
TTC28-207ENST00000490475 DNAJC2Q99543 621 aaKnown RBP12.49□□□□□ -0.41
TTC28-207ENST00000490475 APBA2Q99767 749 aa12.49□□□□□ -0.41
TTC28-207ENST00000490475 SH2D4AQ9H788 454 aa12.49□□□□□ -0.41
TTC28-207ENST00000490475 MCM9Q9NXL9 1143 aa12.49□□□□□ -0.41
TTC28-207ENST00000490475 RBPJLQ9UBG7 517 aa12.49□□□□□ -0.41
TTC28-207ENST00000490475 NDUFB9Q9Y6M9 179 aa12.49□□□□□ -0.41
TTC28-207ENST00000490475 IVNS1ABPQ9Y6Y0 642 aa12.49□□□□□ -0.41
TTC28-207ENST00000490475 ZNF532Q9HCE3 1301 aa12.48□□□□□ -0.41
TTC28-207ENST00000490475 GOLIM4O00461 696 aa12.48□□□□□ -0.41
TTC28-207ENST00000490475 ATP5JP18859 108 aa12.48□□□□□ -0.41
TTC28-207ENST00000490475 FXR1P51114 621 aaKnown RBP eCLIP12.48□□□□□ -0.41
TTC28-207ENST00000490475 GABPAQ06546 454 aa12.48□□□□□ -0.41
TTC28-207ENST00000490475 CATSPERGQ6ZRH7 1159 aa12.48□□□□□ -0.41
TTC28-207ENST00000490475 TMEM179Q6ZVK1 233 aa12.48□□□□□ -0.41
TTC28-207ENST00000490475 GPR142Q7Z601 462 aa12.48□□□□□ -0.41
TTC28-207ENST00000490475 CCDC17Q96LX7 622 aa12.48□□□□□ -0.41
TTC28-207ENST00000490475 PAGR1Q9BTK6 254 aa12.48□□□□□ -0.41
TTC28-207ENST00000490475 NBPF3Q9H094 633 aa12.48□□□□□ -0.41
TTC28-207ENST00000490475 PAG1Q9NWQ8 432 aa12.48□□□□□ -0.41
TTC28-207ENST00000490475 HOXC10Q9NYD6 342 aa12.48□□□□□ -0.41
TTC28-207ENST00000490475 MYH8P13535 1937 aa12.48□□□□□ -0.41
TTC28-207ENST00000490475 SLC15A5A6NIM6 579 aa12.47□□□□□ -0.41
TTC28-207ENST00000490475 MSCO60682 206 aa12.47□□□□□ -0.41
TTC28-207ENST00000490475 VCAM1P19320 739 aa12.47□□□□□ -0.41
TTC28-207ENST00000490475 CYP2B6P20813 491 aa12.47□□□□□ -0.41
TTC28-207ENST00000490475 SHMT1P34896 483 aa12.47□□□□□ -0.41
TTC28-207ENST00000490475 PLCD1P51178 756 aa12.47□□□□□ -0.41
TTC28-207ENST00000490475 JAG1P78504 1218 aa12.47□□□□□ -0.41
TTC28-207ENST00000490475 AAMPQ13685 434 aa12.47□□□□□ -0.41
TTC28-207ENST00000490475 MAP3K21Q5TCX8 1036 aa12.47□□□□□ -0.41
TTC28-207ENST00000490475 CHRDL2Q6WN34 429 aa12.47□□□□□ -0.41
TTC28-207ENST00000490475 MB21D1Q8N884 522 aa12.47□□□□□ -0.41
TTC28-207ENST00000490475 TRIB2Q92519 343 aa12.47□□□□□ -0.41
TTC28-207ENST00000490475 LPAR1Q92633 364 aa12.47□□□□□ -0.41
TTC28-207ENST00000490475 PAWRQ96IZ0 340 aaKnown RBP12.47□□□□□ -0.41
TTC28-207ENST00000490475 ARHGEF10LQ9HCE6 1279 aa12.47□□□□□ -0.41
TTC28-207ENST00000490475 TXNRD2Q9NNW7 524 aa12.47□□□□□ -0.41
TTC28-207ENST00000490475 DCP1AQ9NPI6 582 aaPredicted RBP12.47□□□□□ -0.41
TTC28-207ENST00000490475 DDX60LQ5H9U9 1706 aaKnown RBP12.47□□□□□ -0.41
TTC28-207ENST00000490475 PLXNB2O15031 1838 aa12.46□□□□□ -0.41
TTC28-207ENST00000490475 MPHOSPH10O00566 681 aaKnown RBP12.46□□□□□ -0.41
TTC28-207ENST00000490475 STRNO43815 780 aa12.46□□□□□ -0.41
TTC28-207ENST00000490475 IGHDP01880 384 aa12.46□□□□□ -0.41
TTC28-207ENST00000490475 PRKAR2AP13861 404 aaKnown RBP12.46□□□□□ -0.41
TTC28-207ENST00000490475 MAP2K5Q13163 448 aa12.46□□□□□ -0.41
TTC28-207ENST00000490475 HDAC1Q13547 482 aaPredicted RBP12.46□□□□□ -0.41
TTC28-207ENST00000490475 COG2Q14746 738 aa12.46□□□□□ -0.41
TTC28-207ENST00000490475 UBE3CQ15386 1083 aa12.46□□□□□ -0.41
TTC28-207ENST00000490475 ZYXQ15942 572 aaKnown RBP12.46□□□□□ -0.41
TTC28-207ENST00000490475 LRRFIP1Q32MZ4 808 aaKnown RBP12.46□□□□□ -0.41
TTC28-207ENST00000490475 MORN1Q5T089 497 aa12.46□□□□□ -0.41
TTC28-207ENST00000490475 MFSD14CQ5VZR4 134 aa12.46□□□□□ -0.41
TTC28-207ENST00000490475 USP6NLQ92738 828 aa12.46□□□□□ -0.41
TTC28-207ENST00000490475 EDC3Q96F86 508 aaKnown RBP12.46□□□□□ -0.41
TTC28-207ENST00000490475 GPATCH3Q96I76 525 aa12.46□□□□□ -0.41
TTC28-207ENST00000490475 HAUS7Q99871 368 aa12.46□□□□□ -0.41
TTC28-207ENST00000490475 SLC5A4Q9NY91 659 aa12.46□□□□□ -0.41
TTC28-207ENST00000490475 OGDHLQ9ULD0 1010 aa12.46□□□□□ -0.41
TTC28-207ENST00000490475 MYH7P12883 1935 aa12.46□□□□□ -0.42
TTC28-207ENST00000490475 TCRBV5S4A2TA0A5A2 114 aa12.45□□□□□ -0.42
TTC28-207ENST00000490475 ADD2P35612 726 aa12.45□□□□□ -0.42
TTC28-207ENST00000490475 Q3C1V9 767 aa12.45□□□□□ -0.42
TTC28-207ENST00000490475 PORCNQ9H237 461 aa12.45□□□□□ -0.42
TTC28-207ENST00000490475 BOLA2Q9H3K6 86 aa12.45□□□□□ -0.42
TTC28-207ENST00000490475 RWDD1Q9H446 243 aaPredicted RBP12.45□□□□□ -0.42
TTC28-207ENST00000490475 C11orf49Q9H6J7 331 aa12.45□□□□□ -0.42
TTC28-207ENST00000490475 RPAP3Q9H6T3 665 aaPredicted RBP12.45□□□□□ -0.42
TTC28-207ENST00000490475 HOXC6P09630 235 aa12.44□□□□□ -0.42
TTC28-207ENST00000490475 PTPREP23469 700 aa12.44□□□□□ -0.42
TTC28-207ENST00000490475 SEPT2Q15019 361 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms