RNA–Protein interactions for RNA: ENST00000490471.1

CDCP1-203, Transcript of CUB domain containing protein 1, humanhuman

TSL 4

Gene CDCP1, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-203ENST00000490471 HERVK_113P62684 666 aa13.7□□□□□ -0.22
CDCP1-203ENST00000490471 HABP4Q5JVS0 413 aaKnown RBP13.7□□□□□ -0.22
CDCP1-203ENST00000490471 TATDN1Q6P1N9 297 aa13.7□□□□□ -0.22
CDCP1-203ENST00000490471 ADGRA1Q86SQ6 560 aa13.7□□□□□ -0.22
CDCP1-203ENST00000490471 ANKLE1Q8NAG6 615 aa13.7□□□□□ -0.22
CDCP1-203ENST00000490471 BCL11AQ9H165 835 aa13.7□□□□□ -0.22
CDCP1-203ENST00000490471 ZBTB40Q9NUA8 1239 aa13.7□□□□□ -0.22
CDCP1-203ENST00000490471 MCM9Q9NXL9 1143 aa13.7□□□□□ -0.22
CDCP1-203ENST00000490471 MYH1P12882 1939 aa13.7□□□□□ -0.22
CDCP1-203ENST00000490471 FOCADQ5VW36 1801 aa13.69□□□□□ -0.22
CDCP1-203ENST00000490471 RPTORQ8N122 1335 aa13.69□□□□□ -0.22
CDCP1-203ENST00000490471 LOC285556D6RIA3 1793 aa13.69□□□□□ -0.22
CDCP1-203ENST00000490471 GOLIM4O00461 696 aa13.69□□□□□ -0.22
CDCP1-203ENST00000490471 XRCC5P13010 732 aaKnown RBP13.69□□□□□ -0.22
CDCP1-203ENST00000490471 ELNP15502 786 aa13.69□□□□□ -0.22
CDCP1-203ENST00000490471 RGS2P41220 211 aa13.69□□□□□ -0.22
CDCP1-203ENST00000490471 NECAB2Q7Z6G3 386 aa13.69□□□□□ -0.22
CDCP1-203ENST00000490471 DEFB118Q96PH6 123 aa13.69□□□□□ -0.22
CDCP1-203ENST00000490471 P2RX7Q99572 595 aaKnown RBP13.69□□□□□ -0.22
CDCP1-203ENST00000490471 LRRCC1Q9C099 1032 aa13.69□□□□□ -0.22
CDCP1-203ENST00000490471 UNC93B1Q9H1C4 597 aa13.69□□□□□ -0.22
CDCP1-203ENST00000490471 ATP8A2Q9NTI2 1148 aa13.69□□□□□ -0.22
CDCP1-203ENST00000490471 HOXC10Q9NYD6 342 aa13.69□□□□□ -0.22
CDCP1-203ENST00000490471 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.69□□□□□ -0.22
CDCP1-203ENST00000490471 ZBTB47Q9UFB7 747 aaPredicted RBP13.69□□□□□ -0.22
CDCP1-203ENST00000490471 RABGAP1Q9Y3P9 1069 aa13.69□□□□□ -0.22
CDCP1-203ENST00000490471 IVNS1ABPQ9Y6Y0 642 aa13.69□□□□□ -0.22
CDCP1-203ENST00000490471 MPHOSPH10O00566 681 aaKnown RBP13.68□□□□□ -0.22
CDCP1-203ENST00000490471 EVI5O60447 810 aa13.68□□□□□ -0.22
CDCP1-203ENST00000490471 SLURP2P0DP57 97 aa13.68□□□□□ -0.22
CDCP1-203ENST00000490471 PDE6AP16499 860 aa13.68□□□□□ -0.22
CDCP1-203ENST00000490471 ATP5JP18859 108 aa13.68□□□□□ -0.22
CDCP1-203ENST00000490471 C12orf42Q96LP6 360 aa13.68□□□□□ -0.22
CDCP1-203ENST00000490471 CCDC17Q96LX7 622 aa13.68□□□□□ -0.22
CDCP1-203ENST00000490471 KIAA1683Q9H0B3 1180 aa13.68□□□□□ -0.22
CDCP1-203ENST00000490471 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.68□□□□□ -0.22
CDCP1-203ENST00000490471 ANTXR1Q9H6X2 564 aa13.68□□□□□ -0.22
CDCP1-203ENST00000490471 ARHGEF10LQ9HCE6 1279 aa13.68□□□□□ -0.22
CDCP1-203ENST00000490471 PAG1Q9NWQ8 432 aa13.68□□□□□ -0.22
CDCP1-203ENST00000490471 SLC5A4Q9NY91 659 aa13.68□□□□□ -0.22
CDCP1-203ENST00000490471 ZSWIM8A7E2V4 1837 aa13.68□□□□□ -0.22
CDCP1-203ENST00000490471 KIAA0100Q14667 2235 aaKnown RBP13.68□□□□□ -0.22
CDCP1-203ENST00000490471 ZNF532Q9HCE3 1301 aa13.67□□□□□ -0.22
CDCP1-203ENST00000490471 ERVK-9P63128 1117 aa13.67□□□□□ -0.22
CDCP1-203ENST00000490471 ERVK-24P63145 666 aa13.67□□□□□ -0.22
CDCP1-203ENST00000490471 RRP1BQ14684 758 aaKnown RBP13.67□□□□□ -0.22
CDCP1-203ENST00000490471 PLEKHH3Q7Z736 793 aa13.67□□□□□ -0.22
CDCP1-203ENST00000490471 PAGR1Q9BTK6 254 aa13.67□□□□□ -0.22
CDCP1-203ENST00000490471 CDK5RAP2Q96SN8 1893 aa13.66□□□□□ -0.22
CDCP1-203ENST00000490471 ZKSCAN1P17029 563 aaPredicted RBP13.66□□□□□ -0.22
CDCP1-203ENST00000490471 CYP2B6P20813 491 aa13.66□□□□□ -0.22
CDCP1-203ENST00000490471 TMEM179Q6ZVK1 233 aa13.66□□□□□ -0.22
CDCP1-203ENST00000490471 RIOK1Q9BRS2 568 aaKnown RBP13.66□□□□□ -0.22
CDCP1-203ENST00000490471 BOLA2Q9H3K6 86 aa13.66□□□□□ -0.22
CDCP1-203ENST00000490471 DNAJC18Q9H819 358 aa13.66□□□□□ -0.22
CDCP1-203ENST00000490471 ZNF287Q9HBT7 754 aa13.66□□□□□ -0.22
CDCP1-203ENST00000490471 PAK6Q9NQU5 681 aaPredicted RBP13.66□□□□□ -0.22
CDCP1-203ENST00000490471 EMILIN3Q9NT22 766 aa13.66□□□□□ -0.22
CDCP1-203ENST00000490471 H0YGN5 161 aa13.65□□□□□ -0.22
CDCP1-203ENST00000490471 COG2Q14746 738 aa13.65□□□□□ -0.22
CDCP1-203ENST00000490471 UBE3CQ15386 1083 aa13.65□□□□□ -0.22
CDCP1-203ENST00000490471 ZYXQ15942 572 aaKnown RBP13.65□□□□□ -0.22
CDCP1-203ENST00000490471 WDR78Q5VTH9 848 aa13.65□□□□□ -0.22
CDCP1-203ENST00000490471 MFSD14CQ5VZR4 134 aa13.65□□□□□ -0.22
CDCP1-203ENST00000490471 CATSPERGQ6ZRH7 1159 aa13.65□□□□□ -0.22
CDCP1-203ENST00000490471 MB21D1Q8N884 522 aa13.65□□□□□ -0.22
CDCP1-203ENST00000490471 LPAR1Q92633 364 aa13.65□□□□□ -0.22
CDCP1-203ENST00000490471 EDC3Q96F86 508 aaKnown RBP13.65□□□□□ -0.22
CDCP1-203ENST00000490471 NBPF3Q9H094 633 aa13.65□□□□□ -0.22
CDCP1-203ENST00000490471 CRISPLD2Q9H0B8 497 aa13.65□□□□□ -0.22
CDCP1-203ENST00000490471 RBPJLQ9UBG7 517 aa13.65□□□□□ -0.22
CDCP1-203ENST00000490471 GJD2Q9UKL4 321 aa13.65□□□□□ -0.22
CDCP1-203ENST00000490471 MYO5AQ9Y4I1 1855 aaKnown RBP13.65□□□□□ -0.22
CDCP1-203ENST00000490471 STRNO43815 780 aa13.64□□□□□ -0.23
CDCP1-203ENST00000490471 MSCO60682 206 aa13.64□□□□□ -0.23
CDCP1-203ENST00000490471 ADD2P35612 726 aa13.64□□□□□ -0.23
CDCP1-203ENST00000490471 PLCD1P51178 756 aa13.64□□□□□ -0.23
CDCP1-203ENST00000490471 GPR142Q7Z601 462 aa13.64□□□□□ -0.23
CDCP1-203ENST00000490471 SHISA4Q96DD7 197 aa13.64□□□□□ -0.23
CDCP1-203ENST00000490471 APBA2Q99767 749 aa13.64□□□□□ -0.23
CDCP1-203ENST00000490471 HAUS7Q99871 368 aa13.64□□□□□ -0.23
CDCP1-203ENST00000490471 DCP1AQ9NPI6 582 aaPredicted RBP13.64□□□□□ -0.23
CDCP1-203ENST00000490471 NDUFB9Q9Y6M9 179 aa13.64□□□□□ -0.23
CDCP1-203ENST00000490471 SLC15A5A6NIM6 579 aa13.63□□□□□ -0.23
CDCP1-203ENST00000490471 ATP2B2Q01814 1243 aa13.63□□□□□ -0.23
CDCP1-203ENST00000490471 MAP2K5Q13163 448 aa13.63□□□□□ -0.23
CDCP1-203ENST00000490471 LBX2Q6XYB7 198 aa13.63□□□□□ -0.23
CDCP1-203ENST00000490471 TANGO6Q9C0B7 1094 aa13.63□□□□□ -0.23
CDCP1-203ENST00000490471 COLQQ9Y215 455 aaPredicted RBP13.63□□□□□ -0.23
CDCP1-203ENST00000490471 A0A1W2PPC1 479 aa13.62□□□□□ -0.23
CDCP1-203ENST00000490471 ERC2O15083 957 aa13.62□□□□□ -0.23
CDCP1-203ENST00000490471 MBD4O95243 580 aa13.62□□□□□ -0.23
CDCP1-203ENST00000490471 ZFYP08048 801 aaPredicted RBP13.62□□□□□ -0.23
CDCP1-203ENST00000490471 GNAT2P19087 354 aa13.62□□□□□ -0.23
CDCP1-203ENST00000490471 VCAM1P19320 739 aa13.62□□□□□ -0.23
CDCP1-203ENST00000490471 SHMT1P34896 483 aa13.62□□□□□ -0.23
CDCP1-203ENST00000490471 GABPAQ06546 454 aa13.62□□□□□ -0.23
CDCP1-203ENST00000490471 UBE2Q1Q7Z7E8 422 aa13.62□□□□□ -0.23
CDCP1-203ENST00000490471 DPP9Q86TI2 863 aa13.62□□□□□ -0.23
CDCP1-203ENST00000490471 SDR42E1Q8WUS8 393 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms