RNA–Protein interactions for RNA: ENST00000490447.6

YIPF3-208, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-208ENST00000490447 RHPN1Q8TCX5 695 aa21.58■■□□□ 1.05
YIPF3-208ENST00000490447 C12orf42Q96LP6 360 aa21.58■■□□□ 1.05
YIPF3-208ENST00000490447 NBPF3Q9H094 633 aa21.58■■□□□ 1.05
YIPF3-208ENST00000490447 RGS2P41220 211 aa21.57■■□□□ 1.04
YIPF3-208ENST00000490447 CCNA1P78396 465 aa21.57■■□□□ 1.04
YIPF3-208ENST00000490447 PLEKHH3Q7Z736 793 aa21.57■■□□□ 1.04
YIPF3-208ENST00000490447 PORCNQ9H237 461 aa21.57■■□□□ 1.04
YIPF3-208ENST00000490447 MYH1P12882 1939 aa21.57■■□□□ 1.04
YIPF3-208ENST00000490447 APBB1O00213 710 aa21.56■■□□□ 1.04
YIPF3-208ENST00000490447 HMMRO75330 724 aa21.56■■□□□ 1.04
YIPF3-208ENST00000490447 Q3C1V9 767 aa21.56■■□□□ 1.04
YIPF3-208ENST00000490447 SLC9C2Q5TAH2 1124 aa21.56■■□□□ 1.04
YIPF3-208ENST00000490447 DIEXFQ68CQ4 756 aaKnown RBP21.56■■□□□ 1.04
YIPF3-208ENST00000490447 KIF1BPQ96EK5 621 aa21.56■■□□□ 1.04
YIPF3-208ENST00000490447 RIOK1Q9BRS2 568 aaKnown RBP21.56■■□□□ 1.04
YIPF3-208ENST00000490447 CRNKL1Q9BZJ0 848 aaKnown RBP21.56■■□□□ 1.04
YIPF3-208ENST00000490447 BCL11AQ9H165 835 aa21.56■■□□□ 1.04
YIPF3-208ENST00000490447 PRO3102Q9H379 93 aa21.56■■□□□ 1.04
YIPF3-208ENST00000490447 C11orf49Q9H6J7 331 aa21.56■■□□□ 1.04
YIPF3-208ENST00000490447 RABGAP1Q9Y3P9 1069 aa21.56■■□□□ 1.04
YIPF3-208ENST00000490447 A0A1W2PPC1 479 aa21.55■■□□□ 1.04
YIPF3-208ENST00000490447 GLRX3O76003 335 aaKnown RBP21.55■■□□□ 1.04
YIPF3-208ENST00000490447 IFIT2P09913 472 aaKnown RBP21.55■■□□□ 1.04
YIPF3-208ENST00000490447 MAP3K21Q5TCX8 1036 aa21.55■■□□□ 1.04
YIPF3-208ENST00000490447 WDR78Q5VTH9 848 aa21.55■■□□□ 1.04
YIPF3-208ENST00000490447 C7orf61Q8IZ16 206 aa21.55■■□□□ 1.04
YIPF3-208ENST00000490447 DNAJC2Q99543 621 aaKnown RBP21.55■■□□□ 1.04
YIPF3-208ENST00000490447 APBA2Q99767 749 aa21.55■■□□□ 1.04
YIPF3-208ENST00000490447 KIAA1683Q9H0B3 1180 aa21.55■■□□□ 1.04
YIPF3-208ENST00000490447 PDE6AP16499 860 aa21.55■■□□□ 1.04
YIPF3-208ENST00000490447 VCAM1P19320 739 aa21.55■■□□□ 1.04
YIPF3-208ENST00000490447 PLCD1P51178 756 aa21.55■■□□□ 1.04
YIPF3-208ENST00000490447 RPAP2Q8IXW5 612 aaPredicted RBP21.55■■□□□ 1.04
YIPF3-208ENST00000490447 OGDHLQ9ULD0 1010 aa21.55■■□□□ 1.04
YIPF3-208ENST00000490447 GOLIM4O00461 696 aa21.54■■□□□ 1.04
YIPF3-208ENST00000490447 MPHOSPH10O00566 681 aaKnown RBP21.54■■□□□ 1.04
YIPF3-208ENST00000490447 SHMT1P34896 483 aa21.54■■□□□ 1.04
YIPF3-208ENST00000490447 MORN1Q5T089 497 aa21.54■■□□□ 1.04
YIPF3-208ENST00000490447 CATSPERGQ6ZRH7 1159 aa21.54■■□□□ 1.04
YIPF3-208ENST00000490447 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.54■■□□□ 1.04
YIPF3-208ENST00000490447 MCM9Q9NXL9 1143 aa21.54■■□□□ 1.04
YIPF3-208ENST00000490447 DDX19BQ9UMR2 479 aa21.54■■□□□ 1.04
YIPF3-208ENST00000490447 PLXNB2O15031 1838 aa21.53■■□□□ 1.04
YIPF3-208ENST00000490447 ZNF532Q9HCE3 1301 aa21.53■■□□□ 1.04
YIPF3-208ENST00000490447 CACNB2Q08289 660 aaPredicted RBP21.53■■□□□ 1.04
YIPF3-208ENST00000490447 ACER1Q8TDN7 264 aa21.53■■□□□ 1.04
YIPF3-208ENST00000490447 USP6NLQ92738 828 aa21.53■■□□□ 1.04
YIPF3-208ENST00000490447 RPAP3Q9H6T3 665 aaPredicted RBP21.53■■□□□ 1.04
YIPF3-208ENST00000490447 STAP2Q9UGK3 403 aa21.53■■□□□ 1.04
YIPF3-208ENST00000490447 IVNS1ABPQ9Y6Y0 642 aa21.53■■□□□ 1.04
YIPF3-208ENST00000490447 LAMA3Q16787 3333 aa21.52■■□□□ 1.04
YIPF3-208ENST00000490447 MAP2K5Q13163 448 aa21.52■■□□□ 1.03
YIPF3-208ENST00000490447 CCL14Q16627 93 aa21.52■■□□□ 1.03
YIPF3-208ENST00000490447 EDC3Q96F86 508 aaKnown RBP21.52■■□□□ 1.03
YIPF3-208ENST00000490447 CNMDO75829 334 aa21.51■■□□□ 1.03
YIPF3-208ENST00000490447 SEPT2Q15019 361 aa21.51■■□□□ 1.03
YIPF3-208ENST00000490447 LBX2Q6XYB7 198 aa21.51■■□□□ 1.03
YIPF3-208ENST00000490447 SDR42E1Q8WUS8 393 aa21.51■■□□□ 1.03
YIPF3-208ENST00000490447 CHMP4BQ9H444 224 aaKnown RBP21.51■■□□□ 1.03
YIPF3-208ENST00000490447 ZMYND8Q9ULU4 1186 aaPredicted RBP21.51■■□□□ 1.03
YIPF3-208ENST00000490447 NAV1Q8NEY1 1877 aa21.5■■□□□ 1.03
YIPF3-208ENST00000490447 RAB11FIP3O75154 756 aa21.5■■□□□ 1.03
YIPF3-208ENST00000490447 CCND3P30281 292 aaPredicted RBP21.5■■□□□ 1.03
YIPF3-208ENST00000490447 MNX1P50219 401 aaPredicted RBP21.5■■□□□ 1.03
YIPF3-208ENST00000490447 GABPAQ06546 454 aa21.5■■□□□ 1.03
YIPF3-208ENST00000490447 MFSD14CQ5VZR4 134 aa21.5■■□□□ 1.03
YIPF3-208ENST00000490447 POTEEQ6S8J3 1075 aa21.5■■□□□ 1.03
YIPF3-208ENST00000490447 COG6Q9Y2V7 657 aa21.5■■□□□ 1.03
YIPF3-208ENST00000490447 DDX60LQ5H9U9 1706 aaKnown RBP21.49■■□□□ 1.03
YIPF3-208ENST00000490447 SLC15A5A6NIM6 579 aa21.49■■□□□ 1.03
YIPF3-208ENST00000490447 LCORLQ8N3X6 602 aa21.49■■□□□ 1.03
YIPF3-208ENST00000490447 DCP1AQ9NPI6 582 aaPredicted RBP21.49■■□□□ 1.03
YIPF3-208ENST00000490447 SWAP70Q9UH65 585 aa21.49■■□□□ 1.03
YIPF3-208ENST00000490447 SPDYE16A6NNV3 312 aaPredicted RBP21.48■■□□□ 1.03
YIPF3-208ENST00000490447 PTPREP23469 700 aa21.48■■□□□ 1.03
YIPF3-208ENST00000490447 GUCY1A2P33402 732 aa21.48■■□□□ 1.03
YIPF3-208ENST00000490447 AMOTL1Q8IY63 956 aa21.48■■□□□ 1.03
YIPF3-208ENST00000490447 TANGO6Q9C0B7 1094 aa21.48■■□□□ 1.03
YIPF3-208ENST00000490447 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.48■■□□□ 1.03
YIPF3-208ENST00000490447 PAG1Q9NWQ8 432 aa21.48■■□□□ 1.03
YIPF3-208ENST00000490447 BTBD7Q9P203 1132 aa21.48■■□□□ 1.03
YIPF3-208ENST00000490447 TCRBV5S4A2TA0A5A2 114 aa21.47■■□□□ 1.03
YIPF3-208ENST00000490447 SYN1P17600 705 aa21.47■■□□□ 1.03
YIPF3-208ENST00000490447 ATP2B2Q01814 1243 aa21.47■■□□□ 1.03
YIPF3-208ENST00000490447 TMEM179Q6ZVK1 233 aa21.47■■□□□ 1.03
YIPF3-208ENST00000490447 BOLA2Q9H3K6 86 aa21.47■■□□□ 1.03
YIPF3-208ENST00000490447 ARMT1Q9H993 441 aa21.47■■□□□ 1.03
YIPF3-208ENST00000490447 ZBTB40Q9NUA8 1239 aa21.47■■□□□ 1.03
YIPF3-208ENST00000490447 PFASO15067 1338 aa21.46■■□□□ 1.03
YIPF3-208ENST00000490447 ALPK3Q96L96 1907 aa21.46■■□□□ 1.03
YIPF3-208ENST00000490447 BMP8BP34820 402 aa21.46■■□□□ 1.03
YIPF3-208ENST00000490447 GRB14Q14449 540 aa21.46■■□□□ 1.03
YIPF3-208ENST00000490447 COG2Q14746 738 aa21.46■■□□□ 1.03
YIPF3-208ENST00000490447 LHX8Q68G74 356 aa21.46■■□□□ 1.03
YIPF3-208ENST00000490447 DDRGK1Q96HY6 314 aa21.46■■□□□ 1.03
YIPF3-208ENST00000490447 GDF15Q99988 308 aa21.46■■□□□ 1.03
YIPF3-208ENST00000490447 HOXC10Q9NYD6 342 aa21.46■■□□□ 1.03
YIPF3-208ENST00000490447 MBD4O95243 580 aa21.45■■□□□ 1.02
YIPF3-208ENST00000490447 CNGA1P29973 690 aa21.45■■□□□ 1.02
YIPF3-208ENST00000490447 EVX2Q03828 476 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms