RNA–Protein interactions for RNA: ENST00000490417.6

SFXN4-208, Transcript of sideroflexin 4, humanhuman

TSL 2

Gene SFXN4, Length 952 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN4-208ENST00000490417 RNF113AO15541 343 aaKnown RBP16.31■□□□□ 0.2
SFXN4-208ENST00000490417 GDF11O95390 407 aa16.31■□□□□ 0.2
SFXN4-208ENST00000490417 USP14P54578 494 aa16.31■□□□□ 0.2
SFXN4-208ENST00000490417 HMGCS2P54868 508 aa16.31■□□□□ 0.2
SFXN4-208ENST00000490417 MOGSQ13724 837 aa16.31■□□□□ 0.2
SFXN4-208ENST00000490417 SLC4A8Q2Y0W8 1093 aa16.31■□□□□ 0.2
SFXN4-208ENST00000490417 SH3D19Q5HYK7 790 aa16.31■□□□□ 0.2
SFXN4-208ENST00000490417 GPAT2Q6NUI2 795 aa16.31■□□□□ 0.2
SFXN4-208ENST00000490417 SDR42E1Q8WUS8 393 aa16.31■□□□□ 0.2
SFXN4-208ENST00000490417 APPBP2Q92624 585 aa16.31■□□□□ 0.2
SFXN4-208ENST00000490417 FEZ1Q99689 392 aa16.31■□□□□ 0.2
SFXN4-208ENST00000490417 CPA4Q9UI42 421 aa16.31■□□□□ 0.2
SFXN4-208ENST00000490417 PTPN22Q9Y2R2 807 aa16.31■□□□□ 0.2
SFXN4-208ENST00000490417 SLC4A4Q9Y6R1 1079 aa16.31■□□□□ 0.2
SFXN4-208ENST00000490417 FMNL1O95466 1100 aaPredicted RBP16.3■□□□□ 0.2
SFXN4-208ENST00000490417 SLURP2P0DP57 97 aa16.3■□□□□ 0.2
SFXN4-208ENST00000490417 GCLCP48506 637 aaPredicted RBP16.3■□□□□ 0.2
SFXN4-208ENST00000490417 FCGRTP55899 365 aa16.3■□□□□ 0.2
SFXN4-208ENST00000490417 RAB3GAP1Q15042 981 aa16.3■□□□□ 0.2
SFXN4-208ENST00000490417 GIMAP6Q6P9H5 292 aa16.3■□□□□ 0.2
SFXN4-208ENST00000490417 TICAM2Q86XR7 235 aa16.3■□□□□ 0.2
SFXN4-208ENST00000490417 GTF3C2Q8WUA4 911 aaPredicted RBP16.3■□□□□ 0.2
SFXN4-208ENST00000490417 FSD1Q9BTV5 496 aa16.3■□□□□ 0.2
SFXN4-208ENST00000490417 ZNF287Q9HBT7 754 aa16.3■□□□□ 0.2
SFXN4-208ENST00000490417 SUPT16HQ9Y5B9 1047 aaKnown RBP16.3■□□□□ 0.2
SFXN4-208ENST00000490417 FOCADQ5VW36 1801 aa16.3■□□□□ 0.2
SFXN4-208ENST00000490417 MPHOSPH10O00566 681 aaKnown RBP16.29■□□□□ 0.2
SFXN4-208ENST00000490417 GH2P01242 217 aa16.29■□□□□ 0.2
SFXN4-208ENST00000490417 CYP2C8P10632 490 aa16.29■□□□□ 0.2
SFXN4-208ENST00000490417 PLCD1P51178 756 aa16.29■□□□□ 0.2
SFXN4-208ENST00000490417 IRX3P78415 501 aaPredicted RBP16.29■□□□□ 0.2
SFXN4-208ENST00000490417 MTMR2Q13614 643 aa16.29■□□□□ 0.2
SFXN4-208ENST00000490417 USP17L2Q6R6M4 530 aa16.29■□□□□ 0.2
SFXN4-208ENST00000490417 CCDC17Q96LX7 622 aa16.29■□□□□ 0.2
SFXN4-208ENST00000490417 NACAP1Q9BZK3 213 aa16.29■□□□□ 0.2
SFXN4-208ENST00000490417 DNAJC18Q9H819 358 aa16.29■□□□□ 0.2
SFXN4-208ENST00000490417 ARPP21Q9UBL0 812 aaPredicted RBP16.29■□□□□ 0.2
SFXN4-208ENST00000490417 MYH1P12882 1939 aa16.28■□□□□ 0.2
SFXN4-208ENST00000490417 PSMC4P43686 418 aa16.28■□□□□ 0.2
SFXN4-208ENST00000490417 PUS7LQ9H0K6 701 aaKnown RBP16.28■□□□□ 0.2
SFXN4-208ENST00000490417 SH2D4AQ9H788 454 aa16.28■□□□□ 0.2
SFXN4-208ENST00000490417 APPP05067 770 aa16.27■□□□□ 0.2
SFXN4-208ENST00000490417 HOXA7P31268 230 aaPredicted RBP16.27■□□□□ 0.2
SFXN4-208ENST00000490417 GABPAQ06546 454 aa16.27■□□□□ 0.2
SFXN4-208ENST00000490417 RRP1BQ14684 758 aaKnown RBP16.27■□□□□ 0.2
SFXN4-208ENST00000490417 SLC9C1Q4G0N8 1177 aa16.27■□□□□ 0.2
SFXN4-208ENST00000490417 TSHZ3Q63HK5 1081 aa16.27■□□□□ 0.2
SFXN4-208ENST00000490417 TMEM179Q6ZVK1 233 aa16.27■□□□□ 0.2
SFXN4-208ENST00000490417 CCDC84Q86UT8 332 aaPredicted RBP16.27■□□□□ 0.2
SFXN4-208ENST00000490417 EVI5LQ96CN4 794 aa16.27■□□□□ 0.2
SFXN4-208ENST00000490417 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.27■□□□□ 0.2
SFXN4-208ENST00000490417 USP17L12C9JPN9 530 aa16.26■□□□□ 0.19
SFXN4-208ENST00000490417 USP17L21D6R901 530 aa16.26■□□□□ 0.19
SFXN4-208ENST00000490417 SLC3A2P08195 630 aaKnown RBP16.26■□□□□ 0.19
SFXN4-208ENST00000490417 BCRP11274 1271 aa16.26■□□□□ 0.19
SFXN4-208ENST00000490417 SHMT1P34896 483 aa16.26■□□□□ 0.19
SFXN4-208ENST00000490417 MLLT1Q03111 559 aaPredicted RBP16.26■□□□□ 0.19
SFXN4-208ENST00000490417 FAM110CQ1W6H9 321 aa16.26■□□□□ 0.19
SFXN4-208ENST00000490417 TREML2Q5T2D2 321 aa16.26■□□□□ 0.19
SFXN4-208ENST00000490417 C12orf60Q5U649 245 aa16.26■□□□□ 0.19
SFXN4-208ENST00000490417 PI4K2BQ8TCG2 481 aa16.26■□□□□ 0.19
SFXN4-208ENST00000490417 RAET1EQ8TD07 263 aa16.26■□□□□ 0.19
SFXN4-208ENST00000490417 STRBPQ96SI9 672 aaKnown RBP16.26■□□□□ 0.19
SFXN4-208ENST00000490417 STAP2Q9UGK3 403 aa16.26■□□□□ 0.19
SFXN4-208ENST00000490417 CDK5RAP2Q96SN8 1893 aa16.26■□□□□ 0.19
SFXN4-208ENST00000490417 ADGRA2Q96PE1 1338 aa16.25■□□□□ 0.19
SFXN4-208ENST00000490417 PRKAB2O43741 272 aa16.25■□□□□ 0.19
SFXN4-208ENST00000490417 TDO2P48775 406 aa16.25■□□□□ 0.19
SFXN4-208ENST00000490417 RGS19P49795 217 aa16.25■□□□□ 0.19
SFXN4-208ENST00000490417 CCAR1Q8IX12 1150 aaKnown RBP16.25■□□□□ 0.19
SFXN4-208ENST00000490417 SMC5Q8IY18 1101 aa16.25■□□□□ 0.19
SFXN4-208ENST00000490417 EXOC6Q8TAG9 804 aa16.25■□□□□ 0.19
SFXN4-208ENST00000490417 COA7Q96BR5 231 aa16.25■□□□□ 0.19
SFXN4-208ENST00000490417 KIAA1683Q9H0B3 1180 aa16.25■□□□□ 0.19
SFXN4-208ENST00000490417 ASCC2Q9H1I8 757 aaPredicted RBP16.25■□□□□ 0.19
SFXN4-208ENST00000490417 ARHGEF10LQ9HCE6 1279 aa16.25■□□□□ 0.19
SFXN4-208ENST00000490417 SRRDQ9UH36 339 aa16.25■□□□□ 0.19
SFXN4-208ENST00000490417 USP17L15C9J2P7 530 aa16.24■□□□□ 0.19
SFXN4-208ENST00000490417 PATL2C9JE40 543 aaKnown RBP16.24■□□□□ 0.19
SFXN4-208ENST00000490417 USP17L13C9JLJ4 530 aa16.24■□□□□ 0.19
SFXN4-208ENST00000490417 USP17L11C9JVI0 530 aa16.24■□□□□ 0.19
SFXN4-208ENST00000490417 USP17L18D6R9N7 530 aa16.24■□□□□ 0.19
SFXN4-208ENST00000490417 USP17L22D6RA61 530 aa16.24■□□□□ 0.19
SFXN4-208ENST00000490417 USP17L17D6RBQ6 530 aa16.24■□□□□ 0.19
SFXN4-208ENST00000490417 USP17L19D6RCP7 530 aa16.24■□□□□ 0.19
SFXN4-208ENST00000490417 USP17L20D6RJB6 530 aa16.24■□□□□ 0.19
SFXN4-208ENST00000490417 POTEB2H3BUK9 544 aa16.24■□□□□ 0.19
SFXN4-208ENST00000490417 GPAA1O43292 621 aa16.24■□□□□ 0.19
SFXN4-208ENST00000490417 PDE1AP54750 535 aa16.24■□□□□ 0.19
SFXN4-208ENST00000490417 USP17L24Q0WX57 530 aa16.24■□□□□ 0.19
SFXN4-208ENST00000490417 SBK1Q52WX2 424 aa16.24■□□□□ 0.19
SFXN4-208ENST00000490417 CHD1LQ86WJ1 897 aa16.24■□□□□ 0.19
SFXN4-208ENST00000490417 ANKRD13CQ8N6S4 541 aa16.24■□□□□ 0.19
SFXN4-208ENST00000490417 OSBP2Q969R2 916 aa16.24■□□□□ 0.19
SFXN4-208ENST00000490417 TRIM47Q96LD4 638 aa16.24■□□□□ 0.19
SFXN4-208ENST00000490417 C12orf42Q96LP6 360 aa16.24■□□□□ 0.19
SFXN4-208ENST00000490417 TMEM121BQ9BXQ6 578 aaPredicted RBP16.24■□□□□ 0.19
SFXN4-208ENST00000490417 MKNK2Q9HBH9 465 aa16.24■□□□□ 0.19
SFXN4-208ENST00000490417 MYPNQ86TC9 1320 aa16.23■□□□□ 0.19
SFXN4-208ENST00000490417 TNPO2O14787 897 aaKnown RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms