RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 ZSWIM8A7E2V4 1837 aa20.92■□□□□ 0.94
SEC13-218ENST00000490283 USP17L15C9J2P7 530 aa20.92■□□□□ 0.94
SEC13-218ENST00000490283 USP17L13C9JLJ4 530 aa20.92■□□□□ 0.94
SEC13-218ENST00000490283 USP17L11C9JVI0 530 aa20.92■□□□□ 0.94
SEC13-218ENST00000490283 USP17L18D6R9N7 530 aa20.92■□□□□ 0.94
SEC13-218ENST00000490283 USP17L22D6RA61 530 aa20.92■□□□□ 0.94
SEC13-218ENST00000490283 USP17L17D6RBQ6 530 aa20.92■□□□□ 0.94
SEC13-218ENST00000490283 USP17L19D6RCP7 530 aa20.92■□□□□ 0.94
SEC13-218ENST00000490283 USP17L20D6RJB6 530 aa20.92■□□□□ 0.94
SEC13-218ENST00000490283 MYCP01106 439 aaPredicted RBP20.92■□□□□ 0.94
SEC13-218ENST00000490283 UBXN2AP68543 259 aa20.92■□□□□ 0.94
SEC13-218ENST00000490283 USP17L24Q0WX57 530 aa20.92■□□□□ 0.94
SEC13-218ENST00000490283 GIMAP6Q6P9H5 292 aa20.92■□□□□ 0.94
SEC13-218ENST00000490283 CCAR1Q8IX12 1150 aaKnown RBP20.92■□□□□ 0.94
SEC13-218ENST00000490283 SLC44A5Q8NCS7 719 aa20.92■□□□□ 0.94
SEC13-218ENST00000490283 P2RX7Q99572 595 aaKnown RBP20.92■□□□□ 0.94
SEC13-218ENST00000490283 POTEFA5A3E0 1075 aa20.91■□□□□ 0.94
SEC13-218ENST00000490283 GPAA1O43292 621 aa20.91■□□□□ 0.94
SEC13-218ENST00000490283 MYH7P12883 1935 aa20.91■□□□□ 0.94
SEC13-218ENST00000490283 FLT3LGP49771 235 aa20.91■□□□□ 0.94
SEC13-218ENST00000490283 EVX2Q03828 476 aa20.91■□□□□ 0.94
SEC13-218ENST00000490283 CTR9Q6PD62 1173 aa20.91■□□□□ 0.94
SEC13-218ENST00000490283 C16orf86Q6ZW13 317 aa20.91■□□□□ 0.94
SEC13-218ENST00000490283 GPRC5AQ8NFJ5 357 aa20.91■□□□□ 0.94
SEC13-218ENST00000490283 ACER1Q8TDN7 264 aa20.91■□□□□ 0.94
SEC13-218ENST00000490283 OSBP2Q969R2 916 aa20.91■□□□□ 0.94
SEC13-218ENST00000490283 SH2D4AQ9H788 454 aa20.91■□□□□ 0.94
SEC13-218ENST00000490283 ARHGEF10LQ9HCE6 1279 aa20.91■□□□□ 0.94
SEC13-218ENST00000490283 MORF4L1Q9UBU8 362 aa20.91■□□□□ 0.94
SEC13-218ENST00000490283 CYP2D7A0A087X1C5 515 aa20.9■□□□□ 0.94
SEC13-218ENST00000490283 APPP05067 770 aa20.9■□□□□ 0.94
SEC13-218ENST00000490283 TDO2P48775 406 aa20.9■□□□□ 0.94
SEC13-218ENST00000490283 CDK8P49336 464 aa20.9■□□□□ 0.94
SEC13-218ENST00000490283 GABRQQ9UN88 632 aa20.9■□□□□ 0.94
SEC13-218ENST00000490283 ADCY3O60266 1144 aa20.89■□□□□ 0.93
SEC13-218ENST00000490283 VCAM1P19320 739 aa20.89■□□□□ 0.93
SEC13-218ENST00000490283 GUCY1A2P33402 732 aa20.89■□□□□ 0.93
SEC13-218ENST00000490283 ICA1Q05084 483 aa20.89■□□□□ 0.93
SEC13-218ENST00000490283 IRF5Q13568 498 aa20.89■□□□□ 0.93
SEC13-218ENST00000490283 PAGR1Q9BTK6 254 aa20.89■□□□□ 0.93
SEC13-218ENST00000490283 NACAP1Q9BZK3 213 aa20.89■□□□□ 0.93
SEC13-218ENST00000490283 CWC22Q9HCG8 908 aaKnown RBP20.89■□□□□ 0.93
SEC13-218ENST00000490283 GSG1L2A8MUP6 293 aa20.88■□□□□ 0.93
SEC13-218ENST00000490283 AKR1B1P15121 316 aa20.88■□□□□ 0.93
SEC13-218ENST00000490283 SBK1Q52WX2 424 aa20.88■□□□□ 0.93
SEC13-218ENST00000490283 PXYLP1Q8TE99 480 aa20.88■□□□□ 0.93
SEC13-218ENST00000490283 ZNF287Q9HBT7 754 aa20.88■□□□□ 0.93
SEC13-218ENST00000490283 SALL3Q9BXA9 1300 aa20.87■□□□□ 0.93
SEC13-218ENST00000490283 MINDY4BA8MYZ0 360 aa20.87■□□□□ 0.93
SEC13-218ENST00000490283 M0R2C6 588 aa20.87■□□□□ 0.93
SEC13-218ENST00000490283 EN2P19622 333 aaPredicted RBP20.87■□□□□ 0.93
SEC13-218ENST00000490283 MAPK4P31152 587 aa20.87■□□□□ 0.93
SEC13-218ENST00000490283 CATSPERGQ6ZRH7 1159 aa20.87■□□□□ 0.93
SEC13-218ENST00000490283 EXOC6Q8TAG9 804 aa20.87■□□□□ 0.93
SEC13-218ENST00000490283 NKX2-3Q8TAU0 364 aa20.87■□□□□ 0.93
SEC13-218ENST00000490283 EVI5LQ96CN4 794 aa20.87■□□□□ 0.93
SEC13-218ENST00000490283 RPAP3Q9H6T3 665 aaPredicted RBP20.87■□□□□ 0.93
SEC13-218ENST00000490283 MKNK2Q9HBH9 465 aa20.87■□□□□ 0.93
SEC13-218ENST00000490283 STAP2Q9UGK3 403 aa20.87■□□□□ 0.93
SEC13-218ENST00000490283 PDE1AP54750 535 aa20.86■□□□□ 0.93
SEC13-218ENST00000490283 ERVK-9P63128 1117 aa20.86■□□□□ 0.93
SEC13-218ENST00000490283 ERVK-24P63145 666 aa20.86■□□□□ 0.93
SEC13-218ENST00000490283 CCNA1P78396 465 aa20.86■□□□□ 0.93
SEC13-218ENST00000490283 LPAR1Q92633 364 aa20.86■□□□□ 0.93
SEC13-218ENST00000490283 TANGO6Q9C0B7 1094 aa20.86■□□□□ 0.93
SEC13-218ENST00000490283 LNPKQ9C0E8 428 aa20.86■□□□□ 0.93
SEC13-218ENST00000490283 RBPJLQ9UBG7 517 aa20.86■□□□□ 0.93
SEC13-218ENST00000490283 RABGAP1Q9Y3P9 1069 aa20.86■□□□□ 0.93
SEC13-218ENST00000490283 SUPT16HQ9Y5B9 1047 aaKnown RBP20.86■□□□□ 0.93
SEC13-218ENST00000490283 PATL2C9JE40 543 aaKnown RBP20.85■□□□□ 0.93
SEC13-218ENST00000490283 ATP2B2Q01814 1243 aa20.85■□□□□ 0.93
SEC13-218ENST00000490283 ZMYM1Q5SVZ6 1142 aa20.85■□□□□ 0.93
SEC13-218ENST00000490283 SOCS4Q8WXH5 440 aa20.85■□□□□ 0.93
SEC13-218ENST00000490283 RNF208Q9H0X6 261 aa20.85■□□□□ 0.93
SEC13-218ENST00000490283 KANSL2Q9H9L4 492 aa20.85■□□□□ 0.93
SEC13-218ENST00000490283 TXNRD2Q9NNW7 524 aa20.85■□□□□ 0.93
SEC13-218ENST00000490283 HTTP42858 3142 aa20.85■□□□□ 0.93
SEC13-218ENST00000490283 MGAMO43451 1857 aa20.84■□□□□ 0.93
SEC13-218ENST00000490283 A0A1W2PRG0 241 aa20.84■□□□□ 0.93
SEC13-218ENST00000490283 CCL5P13501 91 aa20.84■□□□□ 0.93
SEC13-218ENST00000490283 ELNP15502 786 aa20.84■□□□□ 0.93
SEC13-218ENST00000490283 MTFR1Q15390 333 aa20.84■□□□□ 0.93
SEC13-218ENST00000490283 B4GALNT3Q6L9W6 998 aa20.84■□□□□ 0.93
SEC13-218ENST00000490283 SMC5Q8IY18 1101 aa20.84■□□□□ 0.93
SEC13-218ENST00000490283 NAPBQ9H115 298 aa20.84■□□□□ 0.93
SEC13-218ENST00000490283 TMX2Q9Y320 296 aa20.84■□□□□ 0.93
SEC13-218ENST00000490283 BAZ2AQ9UIF9 1905 aaKnown RBP20.84■□□□□ 0.93
SEC13-218ENST00000490283 RBBP6Q7Z6E9 1792 aaKnown RBP20.83■□□□□ 0.93
SEC13-218ENST00000490283 SMIM22K7EJ46 135 aa20.83■□□□□ 0.93
SEC13-218ENST00000490283 INHAP05111 366 aa20.83■□□□□ 0.93
SEC13-218ENST00000490283 SLC3A2P08195 630 aaKnown RBP20.83■□□□□ 0.93
SEC13-218ENST00000490283 IFNL3Q8IZI9 196 aa20.83■□□□□ 0.93
SEC13-218ENST00000490283 STK11IPQ8N1F8 1099 aa20.83■□□□□ 0.93
SEC13-218ENST00000490283 NUDT12Q9BQG2 462 aa20.83■□□□□ 0.93
SEC13-218ENST00000490283 EPB41L4AQ9HCS5 686 aaPredicted RBP20.83■□□□□ 0.93
SEC13-218ENST00000490283 HOXC10Q9NYD6 342 aa20.83■□□□□ 0.93
SEC13-218ENST00000490283 ROBO3Q96MS0 1386 aa20.83■□□□□ 0.92
SEC13-218ENST00000490283 COG2Q14746 738 aa20.82■□□□□ 0.92
SEC13-218ENST00000490283 LBX2Q6XYB7 198 aa20.82■□□□□ 0.92
SEC13-218ENST00000490283 CLEC10AQ8IUN9 316 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms