RNA–Protein interactions for RNA: ENST00000490112.1

UBP1-211, Transcript of upstream binding protein 1, humanhuman

TSL 5

Gene UBP1, Length 633 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-211ENST00000490112 NECAB2Q7Z6G3 386 aa13.06□□□□□ -0.32
UBP1-211ENST00000490112 FTSJ3Q8IY81 847 aaKnown RBP13.06□□□□□ -0.32
UBP1-211ENST00000490112 TRMT44Q8IYL2 757 aaKnown RBP13.06□□□□□ -0.32
UBP1-211ENST00000490112 TMEM57Q8N5G2 664 aa13.06□□□□□ -0.32
UBP1-211ENST00000490112 HMX1Q9NP08 348 aaPredicted RBP13.06□□□□□ -0.32
UBP1-211ENST00000490112 SNRKQ9NRH2 765 aa13.06□□□□□ -0.32
UBP1-211ENST00000490112 RBM27Q9P2N5 1060 aaKnown RBP13.06□□□□□ -0.32
UBP1-211ENST00000490112 FLT1P17948 1338 aa13.06□□□□□ -0.32
UBP1-211ENST00000490112 RPTORQ8N122 1335 aa13.06□□□□□ -0.32
UBP1-211ENST00000490112 USP17L10C9JJH3 530 aa13.05□□□□□ -0.32
UBP1-211ENST00000490112 MTMR2Q13614 643 aa13.05□□□□□ -0.32
UBP1-211ENST00000490112 MAPKAPK5Q8IW41 473 aa13.05□□□□□ -0.32
UBP1-211ENST00000490112 GPRC5AQ8NFJ5 357 aa13.05□□□□□ -0.32
UBP1-211ENST00000490112 SOCS4Q8WXH5 440 aa13.05□□□□□ -0.32
UBP1-211ENST00000490112 DBNDD2Q9BQY9 259 aa13.05□□□□□ -0.32
UBP1-211ENST00000490112 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.05□□□□□ -0.32
UBP1-211ENST00000490112 GJD2Q9UKL4 321 aa13.05□□□□□ -0.32
UBP1-211ENST00000490112 NOP58Q9Y2X3 529 aaKnown RBP13.05□□□□□ -0.32
UBP1-211ENST00000490112 DOCK3Q8IZD9 2030 aa13.05□□□□□ -0.32
UBP1-211ENST00000490112 XRCC5P13010 732 aaKnown RBP13.04□□□□□ -0.32
UBP1-211ENST00000490112 MAPK4P31152 587 aa13.04□□□□□ -0.32
UBP1-211ENST00000490112 PDE3AQ14432 1141 aa13.04□□□□□ -0.32
UBP1-211ENST00000490112 RRP1BQ14684 758 aaKnown RBP13.04□□□□□ -0.32
UBP1-211ENST00000490112 CCAR1Q8IX12 1150 aaKnown RBP13.04□□□□□ -0.32
UBP1-211ENST00000490112 PAWRQ96IZ0 340 aaKnown RBP13.04□□□□□ -0.32
UBP1-211ENST00000490112 PRO3102Q9H379 93 aa13.04□□□□□ -0.32
UBP1-211ENST00000490112 FOCADQ5VW36 1801 aa13.04□□□□□ -0.32
UBP1-211ENST00000490112 RIOK3O14730 519 aaKnown RBP13.03□□□□□ -0.32
UBP1-211ENST00000490112 HERVK_113P62684 666 aa13.03□□□□□ -0.32
UBP1-211ENST00000490112 ERC1Q8IUD2 1116 aa13.03□□□□□ -0.32
UBP1-211ENST00000490112 P2RX7Q99572 595 aaKnown RBP13.03□□□□□ -0.32
UBP1-211ENST00000490112 NUDT12Q9BQG2 462 aa13.03□□□□□ -0.32
UBP1-211ENST00000490112 NBPF3Q9H094 633 aa13.03□□□□□ -0.32
UBP1-211ENST00000490112 PALD1Q9ULE6 856 aa13.03□□□□□ -0.32
UBP1-211ENST00000490112 ZBTB21Q9ULJ3 1066 aa13.03□□□□□ -0.32
UBP1-211ENST00000490112 TNNQ9UQP3 1299 aa13.03□□□□□ -0.32
UBP1-211ENST00000490112 CYP7A1P22680 504 aa13.02□□□□□ -0.33
UBP1-211ENST00000490112 ZAP70P43403 619 aa13.02□□□□□ -0.33
UBP1-211ENST00000490112 MAP3K12Q12852 859 aa13.02□□□□□ -0.33
UBP1-211ENST00000490112 USP17L2Q6R6M4 530 aa13.02□□□□□ -0.33
UBP1-211ENST00000490112 ADGRA1Q86SQ6 560 aa13.02□□□□□ -0.33
UBP1-211ENST00000490112 ITPRIPQ8IWB1 547 aa13.02□□□□□ -0.33
UBP1-211ENST00000490112 DNAJC18Q9H819 358 aa13.02□□□□□ -0.33
UBP1-211ENST00000490112 DBNLQ9UJU6 430 aaKnown RBP13.02□□□□□ -0.33
UBP1-211ENST00000490112 SIPA1L1O43166 1804 aa13.02□□□□□ -0.33
UBP1-211ENST00000490112 CDK5RAP2Q96SN8 1893 aa13.02□□□□□ -0.33
UBP1-211ENST00000490112 LAMA3Q16787 3333 aa13.01□□□□□ -0.33
UBP1-211ENST00000490112 IDH1O75874 414 aaKnown RBP13.01□□□□□ -0.33
UBP1-211ENST00000490112 GLRX3O76003 335 aaKnown RBP13.01□□□□□ -0.33
UBP1-211ENST00000490112 GDF11O95390 407 aa13.01□□□□□ -0.33
UBP1-211ENST00000490112 USP5P45974 858 aa13.01□□□□□ -0.33
UBP1-211ENST00000490112 USP14P54578 494 aa13.01□□□□□ -0.33
UBP1-211ENST00000490112 ERVK-9P63128 1117 aa13.01□□□□□ -0.33
UBP1-211ENST00000490112 ERVK-24P63145 666 aa13.01□□□□□ -0.33
UBP1-211ENST00000490112 CCNA1P78396 465 aa13.01□□□□□ -0.33
UBP1-211ENST00000490112 HSP90AB4PQ58FF6 505 aa13.01□□□□□ -0.33
UBP1-211ENST00000490112 TTC6Q86TZ1 520 aa13.01□□□□□ -0.33
UBP1-211ENST00000490112 EHD4Q9H223 541 aa13.01□□□□□ -0.33
UBP1-211ENST00000490112 CWC22Q9HCG8 908 aaKnown RBP13.01□□□□□ -0.33
UBP1-211ENST00000490112 PIH1D3Q9NQM4 214 aaKnown RBP13.01□□□□□ -0.33
UBP1-211ENST00000490112 SAP30BPQ9UHR5 308 aaKnown RBP13.01□□□□□ -0.33
UBP1-211ENST00000490112 OGDHLQ9ULD0 1010 aa13.01□□□□□ -0.33
UBP1-211ENST00000490112 ZKSCAN1P17029 563 aaPredicted RBP13□□□□□ -0.33
UBP1-211ENST00000490112 CYP2B6P20813 491 aa13□□□□□ -0.33
UBP1-211ENST00000490112 RGS2P41220 211 aa13□□□□□ -0.33
UBP1-211ENST00000490112 MAP3K21Q5TCX8 1036 aa13□□□□□ -0.33
UBP1-211ENST00000490112 TATDN1Q6P1N9 297 aa13□□□□□ -0.33
UBP1-211ENST00000490112 EAF2Q96CJ1 260 aaPredicted RBP13□□□□□ -0.33
UBP1-211ENST00000490112 C12orf42Q96LP6 360 aa13□□□□□ -0.33
UBP1-211ENST00000490112 CCDC8Q9H0W5 538 aaPredicted RBP13□□□□□ -0.33
UBP1-211ENST00000490112 RBPJLQ9UBG7 517 aa13□□□□□ -0.33
UBP1-211ENST00000490112 SERPINB13Q9UIV8 391 aa13□□□□□ -0.33
UBP1-211ENST00000490112 DNAH12Q6ZR08 3092 aa12.99□□□□□ -0.33
UBP1-211ENST00000490112 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.99□□□□□ -0.33
UBP1-211ENST00000490112 USP17L15C9J2P7 530 aa12.99□□□□□ -0.33
UBP1-211ENST00000490112 USP17L13C9JLJ4 530 aa12.99□□□□□ -0.33
UBP1-211ENST00000490112 USP17L11C9JVI0 530 aa12.99□□□□□ -0.33
UBP1-211ENST00000490112 USP17L18D6R9N7 530 aa12.99□□□□□ -0.33
UBP1-211ENST00000490112 USP17L22D6RA61 530 aa12.99□□□□□ -0.33
UBP1-211ENST00000490112 USP17L17D6RBQ6 530 aa12.99□□□□□ -0.33
UBP1-211ENST00000490112 USP17L19D6RCP7 530 aa12.99□□□□□ -0.33
UBP1-211ENST00000490112 USP17L20D6RJB6 530 aa12.99□□□□□ -0.33
UBP1-211ENST00000490112 GH2P01242 217 aa12.99□□□□□ -0.33
UBP1-211ENST00000490112 BMP8BP34820 402 aa12.99□□□□□ -0.33
UBP1-211ENST00000490112 DYNLL1P63167 89 aaKnown RBP12.99□□□□□ -0.33
UBP1-211ENST00000490112 JAG1P78504 1218 aa12.99□□□□□ -0.33
UBP1-211ENST00000490112 USP17L24Q0WX57 530 aa12.99□□□□□ -0.33
UBP1-211ENST00000490112 TTF1Q15361 905 aaPredicted RBP12.99□□□□□ -0.33
UBP1-211ENST00000490112 CERKLQ49MI3 558 aaPredicted RBP12.99□□□□□ -0.33
UBP1-211ENST00000490112 PLEKHH3Q7Z736 793 aa12.99□□□□□ -0.33
UBP1-211ENST00000490112 MAGEB6Q8N7X4 407 aa12.99□□□□□ -0.33
UBP1-211ENST00000490112 TRIB2Q92519 343 aa12.99□□□□□ -0.33
UBP1-211ENST00000490112 ZFP91Q96JP5 570 aaPredicted RBP12.99□□□□□ -0.33
UBP1-211ENST00000490112 FEZ1Q99689 392 aa12.99□□□□□ -0.33
UBP1-211ENST00000490112 C11orf49Q9H6J7 331 aa12.99□□□□□ -0.33
UBP1-211ENST00000490112 C1orf115Q9H7X2 142 aa12.99□□□□□ -0.33
UBP1-211ENST00000490112 TXNRD2Q9NNW7 524 aa12.99□□□□□ -0.33
UBP1-211ENST00000490112 CABP5Q9NP86 173 aa12.99□□□□□ -0.33
UBP1-211ENST00000490112 EMILIN3Q9NT22 766 aa12.99□□□□□ -0.33
UBP1-211ENST00000490112 RABGAP1Q9Y3P9 1069 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms