RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 NETO1Q8TDF5 533 aa8.69□□□□□ -1.02
CCDC39-206ENST00000489868 GPRASP2Q96D09 838 aa8.69□□□□□ -1.02
CCDC39-206ENST00000489868 KIF2CQ99661 725 aa8.69□□□□□ -1.02
CCDC39-206ENST00000489868 TNKS2Q9H2K2 1166 aa8.69□□□□□ -1.02
CCDC39-206ENST00000489868 BSDC1Q9NW68 430 aaPredicted RBP8.69□□□□□ -1.02
CCDC39-206ENST00000489868 ZNRF3Q9ULT6 936 aa8.69□□□□□ -1.02
CCDC39-206ENST00000489868 ZNF865P0CJ78 1059 aaPredicted RBP8.68□□□□□ -1.02
CCDC39-206ENST00000489868 ERCC5P28715 1186 aaPredicted RBP8.68□□□□□ -1.02
CCDC39-206ENST00000489868 CD96P40200 585 aa8.68□□□□□ -1.02
CCDC39-206ENST00000489868 RASGRP4Q8TDF6 673 aa8.68□□□□□ -1.02
CCDC39-206ENST00000489868 ATG4CQ96DT6 458 aa8.68□□□□□ -1.02
CCDC39-206ENST00000489868 CAPN6Q9Y6Q1 641 aa8.68□□□□□ -1.02
CCDC39-206ENST00000489868 MEIS3P2A8K0S8 358 aa8.67□□□□□ -1.02
CCDC39-206ENST00000489868 E9PSI1 815 aa8.67□□□□□ -1.02
CCDC39-206ENST00000489868 UBOX5O94941 541 aa8.67□□□□□ -1.02
CCDC39-206ENST00000489868 CBX7O95931 251 aa8.67□□□□□ -1.02
CCDC39-206ENST00000489868 BNIP3Q12983 259 aa8.67□□□□□ -1.02
CCDC39-206ENST00000489868 IFI16Q16666 785 aaKnown RBP8.67□□□□□ -1.02
CCDC39-206ENST00000489868 SFRP5Q5T4F7 317 aa8.67□□□□□ -1.02
CCDC39-206ENST00000489868 CDCP2Q5VXM1 449 aa8.67□□□□□ -1.02
CCDC39-206ENST00000489868 ZNF574Q6ZN55 896 aaPredicted RBP8.67□□□□□ -1.02
CCDC39-206ENST00000489868 C22orf34Q6ZV56 151 aa8.67□□□□□ -1.02
CCDC39-206ENST00000489868 BCL7CQ8WUZ0 217 aaPredicted RBP8.67□□□□□ -1.02
CCDC39-206ENST00000489868 TMEM40Q8WWA1 233 aa8.67□□□□□ -1.02
CCDC39-206ENST00000489868 Q96M66 194 aa8.67□□□□□ -1.02
CCDC39-206ENST00000489868 CCSER2Q9H7U1 834 aa8.67□□□□□ -1.02
CCDC39-206ENST00000489868 CNNM2Q9H8M5 875 aa8.67□□□□□ -1.02
CCDC39-206ENST00000489868 EFR3BQ9Y2G0 817 aa8.67□□□□□ -1.02
CCDC39-206ENST00000489868 SOX9P48436 509 aa8.66□□□□□ -1.02
CCDC39-206ENST00000489868 CCDC81Q6ZN84 652 aa8.66□□□□□ -1.02
CCDC39-206ENST00000489868 ARHGAP27Q6ZUM4 889 aa8.66□□□□□ -1.02
CCDC39-206ENST00000489868 SPRED2Q7Z698 418 aa8.66□□□□□ -1.02
CCDC39-206ENST00000489868 PHACTR4Q8IZ21 702 aa8.66□□□□□ -1.02
CCDC39-206ENST00000489868 GNAT3A8MTJ3 354 aa8.65□□□□□ -1.02
CCDC39-206ENST00000489868 RGS13O14921 159 aa8.65□□□□□ -1.02
CCDC39-206ENST00000489868 XP32Q5T750 250 aa8.65□□□□□ -1.02
CCDC39-206ENST00000489868 ZNF746Q6NUN9 644 aaPredicted RBP8.65□□□□□ -1.02
CCDC39-206ENST00000489868 NLRC3Q7RTR2 1065 aa8.65□□□□□ -1.02
CCDC39-206ENST00000489868 VSIG10LQ86VR7 867 aa8.65□□□□□ -1.02
CCDC39-206ENST00000489868 MFSD4AQ8N468 514 aa8.65□□□□□ -1.02
CCDC39-206ENST00000489868 CCDC74BQ96LY2 380 aa8.65□□□□□ -1.02
CCDC39-206ENST00000489868 LRRN2O75325 713 aa8.64□□□□□ -1.03
CCDC39-206ENST00000489868 ACRP10323 421 aa8.64□□□□□ -1.03
CCDC39-206ENST00000489868 NME1P15531 152 aaKnown RBP8.64□□□□□ -1.03
CCDC39-206ENST00000489868 RAG1P15918 1043 aa8.64□□□□□ -1.03
CCDC39-206ENST00000489868 ETV3P41162 512 aa8.64□□□□□ -1.03
CCDC39-206ENST00000489868 TNK2Q07912 1038 aa8.64□□□□□ -1.03
CCDC39-206ENST00000489868 MLECQ14165 292 aa8.64□□□□□ -1.03
CCDC39-206ENST00000489868 VWCEQ96DN2 955 aa8.64□□□□□ -1.03
CCDC39-206ENST00000489868 KREMEN1Q96MU8 473 aa8.64□□□□□ -1.03
CCDC39-206ENST00000489868 PAK6Q9NQU5 681 aaPredicted RBP8.64□□□□□ -1.03
CCDC39-206ENST00000489868 INPP5FQ9Y2H2 1132 aa8.64□□□□□ -1.03
CCDC39-206ENST00000489868 ST14Q9Y5Y6 855 aa8.64□□□□□ -1.03
CCDC39-206ENST00000489868 WNT11O96014 354 aa8.63□□□□□ -1.03
CCDC39-206ENST00000489868 RUFY4Q6ZNE9 571 aa8.63□□□□□ -1.03
CCDC39-206ENST00000489868 HSPA12BQ96MM6 686 aa8.63□□□□□ -1.03
CCDC39-206ENST00000489868 FERD3LQ96RJ6 166 aa8.63□□□□□ -1.03
CCDC39-206ENST00000489868 SLC9A7Q96T83 725 aa8.63□□□□□ -1.03
CCDC39-206ENST00000489868 TMEM265A0A087WTH1 108 aa8.62□□□□□ -1.03
CCDC39-206ENST00000489868 NASPP49321 788 aaPredicted RBP8.62□□□□□ -1.03
CCDC39-206ENST00000489868 GP2P55259 537 aaKnown RBP8.62□□□□□ -1.03
CCDC39-206ENST00000489868 PRKCQQ04759 706 aa8.62□□□□□ -1.03
CCDC39-206ENST00000489868 AOC3Q16853 763 aa8.62□□□□□ -1.03
CCDC39-206ENST00000489868 CDKAL1Q5VV42 579 aa8.62□□□□□ -1.03
CCDC39-206ENST00000489868 FBXW10Q5XX13 1052 aa8.62□□□□□ -1.03
CCDC39-206ENST00000489868 LSRQ86X29 649 aaPredicted RBP8.62□□□□□ -1.03
CCDC39-206ENST00000489868 SEMA3GQ9NS98 782 aa8.62□□□□□ -1.03
CCDC39-206ENST00000489868 VAV3Q9UKW4 847 aa8.62□□□□□ -1.03
CCDC39-206ENST00000489868 ANGEL1Q9UNK9 670 aaKnown RBP8.62□□□□□ -1.03
CCDC39-206ENST00000489868 OAS3Q9Y6K5 1087 aaKnown RBP8.62□□□□□ -1.03
CCDC39-206ENST00000489868 PITPNM2Q9BZ72 1349 aa8.61□□□□□ -1.03
CCDC39-206ENST00000489868 WASH4PA8MWX3 477 aa8.61□□□□□ -1.03
CCDC39-206ENST00000489868 FAM155AB1AL88 458 aaPredicted RBP8.61□□□□□ -1.03
CCDC39-206ENST00000489868 TNFRSF10CO14798 259 aa8.61□□□□□ -1.03
CCDC39-206ENST00000489868 CD8BP10966 210 aa8.61□□□□□ -1.03
CCDC39-206ENST00000489868 CYP7A1P22680 504 aa8.61□□□□□ -1.03
CCDC39-206ENST00000489868 GBP1P32455 592 aa8.61□□□□□ -1.03
CCDC39-206ENST00000489868 KIR3DL1P43629 444 aa8.61□□□□□ -1.03
CCDC39-206ENST00000489868 LRRFIP1Q32MZ4 808 aaKnown RBP8.61□□□□□ -1.03
CCDC39-206ENST00000489868 TMEM192Q8IY95 271 aa8.61□□□□□ -1.03
CCDC39-206ENST00000489868 DTWD2Q8NBA8 298 aa8.61□□□□□ -1.03
CCDC39-206ENST00000489868 RBBP8NLQ8NC74 664 aaPredicted RBP8.61□□□□□ -1.03
CCDC39-206ENST00000489868 FLCNQ8NFG4 579 aa8.61□□□□□ -1.03
CCDC39-206ENST00000489868 RNF141Q8WVD5 230 aa8.61□□□□□ -1.03
CCDC39-206ENST00000489868 HRASLS5Q96KN8 279 aa8.61□□□□□ -1.03
CCDC39-206ENST00000489868 TINF2Q9BSI4 451 aa8.61□□□□□ -1.03
CCDC39-206ENST00000489868 SLC5A6Q9Y289 635 aa8.61□□□□□ -1.03
CCDC39-206ENST00000489868 SNX11Q9Y5W9 270 aa8.61□□□□□ -1.03
CCDC39-206ENST00000489868 FAM86C2PA6NEL3 165 aa8.6□□□□□ -1.03
CCDC39-206ENST00000489868 CLCN7P51798 805 aa8.6□□□□□ -1.03
CCDC39-206ENST00000489868 COL9A2Q14055 689 aaPredicted RBP8.6□□□□□ -1.03
CCDC39-206ENST00000489868 ZYXQ15942 572 aaKnown RBP8.6□□□□□ -1.03
CCDC39-206ENST00000489868 MISP3Q96FF7 219 aa8.6□□□□□ -1.03
CCDC39-206ENST00000489868 COX4I2Q96KJ9 171 aa8.6□□□□□ -1.03
CCDC39-206ENST00000489868 SPATA32Q96LK8 384 aa8.6□□□□□ -1.03
CCDC39-206ENST00000489868 CAPN10Q9HC96 672 aa8.6□□□□□ -1.03
CCDC39-206ENST00000489868 H3BS24 57 aa8.59□□□□□ -1.03
CCDC39-206ENST00000489868 IMPDH2P12268 514 aa8.59□□□□□ -1.03
CCDC39-206ENST00000489868 NBPF11Q86T75 865 aa8.59□□□□□ -1.03
CCDC39-206ENST00000489868 ABI1Q8IZP0 508 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms