RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 RBM5P52756 815 aaKnown RBP eCLIP5.38□□□□□ -1.55
SNRNP40-206ENST00000489853 GNGT1P63211 74 aa5.38□□□□□ -1.55
SNRNP40-206ENST00000489853 SKOR1P84550 965 aa5.38□□□□□ -1.55
SNRNP40-206ENST00000489853 ATP8B2P98198 1209 aa5.38□□□□□ -1.55
SNRNP40-206ENST00000489853 IFFO1Q0D2I5 559 aa5.38□□□□□ -1.55
SNRNP40-206ENST00000489853 TBX2Q13207 712 aaPredicted RBP5.38□□□□□ -1.55
SNRNP40-206ENST00000489853 NCAPHQ15003 741 aa5.38□□□□□ -1.55
SNRNP40-206ENST00000489853 HSP90AB2PQ58FF8 381 aa5.38□□□□□ -1.55
SNRNP40-206ENST00000489853 TSHZ3Q63HK5 1081 aa5.38□□□□□ -1.55
SNRNP40-206ENST00000489853 LYPD8Q6UX82 237 aa5.38□□□□□ -1.55
SNRNP40-206ENST00000489853 TAX1BP1Q86VP1 789 aa5.38□□□□□ -1.55
SNRNP40-206ENST00000489853 CEP57Q86XR8 500 aa5.38□□□□□ -1.55
SNRNP40-206ENST00000489853 COG1Q8WTW3 980 aa5.38□□□□□ -1.55
SNRNP40-206ENST00000489853 RUFY2Q8WXA3 655 aa5.38□□□□□ -1.55
SNRNP40-206ENST00000489853 MRRFQ96E11 262 aaKnown RBP5.38□□□□□ -1.55
SNRNP40-206ENST00000489853 LRCH3Q96II8 777 aa5.38□□□□□ -1.55
SNRNP40-206ENST00000489853 ZNF594Q96JF6 807 aaPredicted RBP5.38□□□□□ -1.55
SNRNP40-206ENST00000489853 RHOXF2Q9BQY4 288 aa5.38□□□□□ -1.55
SNRNP40-206ENST00000489853 SDF4Q9BRK5 362 aa5.38□□□□□ -1.55
SNRNP40-206ENST00000489853 CRACR2AQ9BSW2 395 aa5.38□□□□□ -1.55
SNRNP40-206ENST00000489853 ACTR5Q9H9F9 607 aaPredicted RBP5.38□□□□□ -1.55
SNRNP40-206ENST00000489853 SLC40A1Q9NP59 571 aa5.38□□□□□ -1.55
SNRNP40-206ENST00000489853 GOLGA6AQ9NYA3 693 aa5.38□□□□□ -1.55
SNRNP40-206ENST00000489853 FKBPLQ9UIM3 349 aa5.38□□□□□ -1.55
SNRNP40-206ENST00000489853 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.38□□□□□ -1.55
SNRNP40-206ENST00000489853 PNPLA6Q8IY17 1366 aa5.38□□□□□ -1.55
SNRNP40-206ENST00000489853 ZC3H4Q9UPT8 1303 aaKnown RBP5.38□□□□□ -1.55
SNRNP40-206ENST00000489853 TARSL2A2RTX5 802 aaKnown RBP5.38□□□□□ -1.55
SNRNP40-206ENST00000489853 CTAGE9A4FU28 777 aa5.38□□□□□ -1.55
SNRNP40-206ENST00000489853 NDUFAB1O14561 156 aa5.38□□□□□ -1.55
SNRNP40-206ENST00000489853 KIF5CO60282 957 aa5.38□□□□□ -1.55
SNRNP40-206ENST00000489853 ZEB2O60315 1214 aa5.38□□□□□ -1.55
SNRNP40-206ENST00000489853 PPFIA2O75334 1257 aa5.38□□□□□ -1.55
SNRNP40-206ENST00000489853 ZNF202O95125 648 aa5.38□□□□□ -1.55
SNRNP40-206ENST00000489853 GNAI2P04899 355 aa5.38□□□□□ -1.55
SNRNP40-206ENST00000489853 CCDC175P0C221 793 aa5.38□□□□□ -1.55
SNRNP40-206ENST00000489853 ZKSCAN1P17029 563 aaPredicted RBP5.38□□□□□ -1.55
SNRNP40-206ENST00000489853 RASA1P20936 1047 aa5.38□□□□□ -1.55
SNRNP40-206ENST00000489853 ADD1P35611 737 aaKnown RBP5.38□□□□□ -1.55
SNRNP40-206ENST00000489853 GGCXP38435 758 aa5.38□□□□□ -1.55
SNRNP40-206ENST00000489853 MAGEA8P43361 318 aa5.38□□□□□ -1.55
SNRNP40-206ENST00000489853 RAB27AP51159 221 aa5.38□□□□□ -1.55
SNRNP40-206ENST00000489853 ATP2B2Q01814 1243 aa5.38□□□□□ -1.55
SNRNP40-206ENST00000489853 PSMD2Q13200 908 aa5.38□□□□□ -1.55
SNRNP40-206ENST00000489853 PTK7Q13308 1070 aa5.38□□□□□ -1.55
SNRNP40-206ENST00000489853 PDIA5Q14554 519 aa5.38□□□□□ -1.55
SNRNP40-206ENST00000489853 SLMAPQ14BN4 828 aa5.38□□□□□ -1.55
SNRNP40-206ENST00000489853 KRT24Q2M2I5 525 aa5.38□□□□□ -1.55
SNRNP40-206ENST00000489853 TTLL7Q6ZT98 887 aa5.38□□□□□ -1.55
SNRNP40-206ENST00000489853 ARHGEF25Q86VW2 580 aa5.38□□□□□ -1.55
SNRNP40-206ENST00000489853 FMR1NBQ8N0W7 255 aaPredicted RBP5.38□□□□□ -1.55
SNRNP40-206ENST00000489853 PNMA1Q8ND90 353 aa5.38□□□□□ -1.55
SNRNP40-206ENST00000489853 CCDC148Q8NFR7 591 aa5.38□□□□□ -1.55
SNRNP40-206ENST00000489853 OR8K1Q8NGG5 319 aa5.38□□□□□ -1.55
SNRNP40-206ENST00000489853 LMBR1Q8WVP7 490 aa5.38□□□□□ -1.55
SNRNP40-206ENST00000489853 SPDL1Q96EA4 605 aa5.38□□□□□ -1.55
SNRNP40-206ENST00000489853 THOC1Q96FV9 657 aaKnown RBP5.38□□□□□ -1.55
SNRNP40-206ENST00000489853 ZNF396Q96N95 335 aaPredicted RBP5.38□□□□□ -1.55
SNRNP40-206ENST00000489853 OCSTAMPQ9BR26 566 aa5.38□□□□□ -1.55
SNRNP40-206ENST00000489853 GOLPH3LQ9H4A5 285 aa5.38□□□□□ -1.55
SNRNP40-206ENST00000489853 SUDS3Q9H7L9 328 aaPredicted RBP5.38□□□□□ -1.55
SNRNP40-206ENST00000489853 IGSF5Q9NSI5 407 aa5.38□□□□□ -1.55
SNRNP40-206ENST00000489853 CHCHD3Q9NX63 227 aaKnown RBP5.38□□□□□ -1.55
SNRNP40-206ENST00000489853 TUBGCP6Q96RT7 1819 aa5.38□□□□□ -1.55
SNRNP40-206ENST00000489853 CDK12Q9NYV4 1490 aaPredicted RBP5.38□□□□□ -1.55
SNRNP40-206ENST00000489853 CPSF1Q10570 1443 aaKnown RBP5.38□□□□□ -1.55
SNRNP40-206ENST00000489853 MYO3AQ8NEV4 1616 aa5.37□□□□□ -1.55
SNRNP40-206ENST00000489853 GRIN2DO15399 1336 aa5.37□□□□□ -1.55
SNRNP40-206ENST00000489853 A0A1W2PQ27 194 aa5.37□□□□□ -1.55
SNRNP40-206ENST00000489853 A0A1W2PQ64 194 aa5.37□□□□□ -1.55
SNRNP40-206ENST00000489853 A0A1W2PQD8 194 aa5.37□□□□□ -1.55
SNRNP40-206ENST00000489853 ERICH2A1L162 156 aa5.37□□□□□ -1.55
SNRNP40-206ENST00000489853 SRRM3A6NNA2 597 aaPredicted RBP5.37□□□□□ -1.55
SNRNP40-206ENST00000489853 AHCYL1O43865 530 aa5.37□□□□□ -1.55
SNRNP40-206ENST00000489853 OPA1O60313 960 aa5.37□□□□□ -1.55
SNRNP40-206ENST00000489853 RTN3O95197 1032 aaPredicted RBP5.37□□□□□ -1.55
SNRNP40-206ENST00000489853 SERPINC1P01008 464 aa5.37□□□□□ -1.55
SNRNP40-206ENST00000489853 EPB41P11171 864 aaKnown RBP5.37□□□□□ -1.55
SNRNP40-206ENST00000489853 PRKAR2BP31323 418 aa5.37□□□□□ -1.55
SNRNP40-206ENST00000489853 CCT4P50991 539 aaKnown RBP5.37□□□□□ -1.55
SNRNP40-206ENST00000489853 USP14P54578 494 aa5.37□□□□□ -1.55
SNRNP40-206ENST00000489853 TAGLNQ01995 201 aaKnown RBP5.37□□□□□ -1.55
SNRNP40-206ENST00000489853 DPCR1Q3MIW9 517 aa5.37□□□□□ -1.55
SNRNP40-206ENST00000489853 Q6ZNB5 142 aa5.37□□□□□ -1.55
SNRNP40-206ENST00000489853 TOGARAM2Q6ZUX3 1019 aa5.37□□□□□ -1.55
SNRNP40-206ENST00000489853 TRIM74Q86UV6 250 aa5.37□□□□□ -1.55
SNRNP40-206ENST00000489853 TRIM73Q86UV7 250 aa5.37□□□□□ -1.55
SNRNP40-206ENST00000489853 CNTROBQ8N137 903 aa5.37□□□□□ -1.55
SNRNP40-206ENST00000489853 FSIP1Q8NA03 581 aa5.37□□□□□ -1.55
SNRNP40-206ENST00000489853 ANAPC4Q9UJX5 808 aa5.37□□□□□ -1.55
SNRNP40-206ENST00000489853 CORO1CQ9ULV4 474 aaPredicted RBP5.37□□□□□ -1.55
SNRNP40-206ENST00000489853 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.37□□□□□ -1.55
SNRNP40-206ENST00000489853 SAMM50Q9Y512 469 aa5.37□□□□□ -1.55
SNRNP40-206ENST00000489853 MAST1Q9Y2H9 1570 aa5.37□□□□□ -1.55
SNRNP40-206ENST00000489853 A0A087WWV3 80 aa5.36□□□□□ -1.55
SNRNP40-206ENST00000489853 SOWAHDA6NJG2 315 aa5.36□□□□□ -1.55
SNRNP40-206ENST00000489853 FAM196BA6NMK8 535 aa5.36□□□□□ -1.55
SNRNP40-206ENST00000489853 H3BQV1 296 aa5.36□□□□□ -1.55
SNRNP40-206ENST00000489853 AGPSO00116 658 aa5.36□□□□□ -1.55
SNRNP40-206ENST00000489853 LIN7AO14910 233 aaPredicted RBP5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms