RNA–Protein interactions for RNA: ENST00000489741.1

PRPF40A-210, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-210ENST00000489741 ABL1P00519 1130 aa8.56□□□□□ -1.04
PRPF40A-210ENST00000489741 PROCP04070 461 aa8.56□□□□□ -1.04
PRPF40A-210ENST00000489741 DNM1Q05193 864 aaKnown RBP8.56□□□□□ -1.04
PRPF40A-210ENST00000489741 AAMPQ13685 434 aa8.56□□□□□ -1.04
PRPF40A-210ENST00000489741 PHLDB3Q6NSJ2 640 aa8.56□□□□□ -1.04
PRPF40A-210ENST00000489741 EDEM1Q92611 657 aa8.56□□□□□ -1.04
PRPF40A-210ENST00000489741 NMRK2Q9NPI5 230 aa8.56□□□□□ -1.04
PRPF40A-210ENST00000489741 C4AP0C0L4 1744 aa8.56□□□□□ -1.04
PRPF40A-210ENST00000489741 ADAMTS7Q9UKP4 1686 aa8.56□□□□□ -1.04
PRPF40A-210ENST00000489741 KCPQ6ZWJ8 1503 aa8.55□□□□□ -1.04
PRPF40A-210ENST00000489741 RPLP1P05386 114 aaKnown RBP8.55□□□□□ -1.04
PRPF40A-210ENST00000489741 EIF1AXP47813 144 aaKnown RBP8.55□□□□□ -1.04
PRPF40A-210ENST00000489741 ZNF790Q6PG37 636 aa8.55□□□□□ -1.04
PRPF40A-210ENST00000489741 DMRTC2Q8IXT2 367 aaPredicted RBP8.55□□□□□ -1.04
PRPF40A-210ENST00000489741 PLD4Q96BZ4 506 aa8.55□□□□□ -1.04
PRPF40A-210ENST00000489741 ZNF496Q96IT1 587 aaPredicted RBP8.55□□□□□ -1.04
PRPF40A-210ENST00000489741 COL3A1P02461 1466 aaPredicted RBP8.55□□□□□ -1.04
PRPF40A-210ENST00000489741 PCNTO95613 3336 aa8.54□□□□□ -1.04
PRPF40A-210ENST00000489741 COL15A1P39059 1388 aa8.54□□□□□ -1.04
PRPF40A-210ENST00000489741 CEMIPQ8WUJ3 1361 aa8.54□□□□□ -1.04
PRPF40A-210ENST00000489741 A0A0A0MRY4 1105 aa8.54□□□□□ -1.04
PRPF40A-210ENST00000489741 GNAT3A8MTJ3 354 aa8.54□□□□□ -1.04
PRPF40A-210ENST00000489741 STARD3NLO95772 234 aa8.54□□□□□ -1.04
PRPF40A-210ENST00000489741 SERPINB2P05120 415 aa8.54□□□□□ -1.04
PRPF40A-210ENST00000489741 HOXD8P13378 290 aaPredicted RBP8.54□□□□□ -1.04
PRPF40A-210ENST00000489741 PRELPP51888 382 aa8.54□□□□□ -1.04
PRPF40A-210ENST00000489741 ZNF211Q13398 564 aaPredicted RBP8.54□□□□□ -1.04
PRPF40A-210ENST00000489741 ALKBH2Q6NS38 261 aa8.54□□□□□ -1.04
PRPF40A-210ENST00000489741 ZNF438Q7Z4V0 828 aa8.54□□□□□ -1.04
PRPF40A-210ENST00000489741 WFDC8Q8IUA0 241 aa8.54□□□□□ -1.04
PRPF40A-210ENST00000489741 OR13H1Q8NG92 308 aa8.54□□□□□ -1.04
PRPF40A-210ENST00000489741 NACC1Q96RE7 527 aa8.54□□□□□ -1.04
PRPF40A-210ENST00000489741 TEX13AQ9BXU3 409 aaPredicted RBP8.54□□□□□ -1.04
PRPF40A-210ENST00000489741 ABI2Q9NYB9 513 aaPredicted RBP8.54□□□□□ -1.04
PRPF40A-210ENST00000489741 TJP1Q07157 1748 aa8.54□□□□□ -1.04
PRPF40A-210ENST00000489741 FAM13AO94988 1023 aa8.53□□□□□ -1.04
PRPF40A-210ENST00000489741 CANXP27824 592 aaKnown RBP8.53□□□□□ -1.04
PRPF40A-210ENST00000489741 HYAL2Q12891 473 aa8.53□□□□□ -1.04
PRPF40A-210ENST00000489741 C8orf34Q49A92 452 aa8.53□□□□□ -1.04
PRPF40A-210ENST00000489741 PDE12Q6L8Q7 609 aaKnown RBP8.53□□□□□ -1.04
PRPF40A-210ENST00000489741 RETREG2Q8NC44 543 aa8.53□□□□□ -1.04
PRPF40A-210ENST00000489741 PHACTR3Q96KR7 559 aa8.53□□□□□ -1.04
PRPF40A-210ENST00000489741 ELP3Q9H9T3 547 aa8.53□□□□□ -1.04
PRPF40A-210ENST00000489741 ANO2Q9NQ90 1003 aa8.53□□□□□ -1.04
PRPF40A-210ENST00000489741 RNF181Q9P0P0 153 aa8.53□□□□□ -1.04
PRPF40A-210ENST00000489741 N4BP2Q86UW6 1770 aaPredicted RBP8.53□□□□□ -1.04
PRPF40A-210ENST00000489741 SCN11AQ9UI33 1791 aa8.53□□□□□ -1.04
PRPF40A-210ENST00000489741 HEG1Q9ULI3 1381 aa8.52□□□□□ -1.05
PRPF40A-210ENST00000489741 A0A087WZG4 1122 aa8.52□□□□□ -1.05
PRPF40A-210ENST00000489741 PDGFAP04085 211 aa8.52□□□□□ -1.05
PRPF40A-210ENST00000489741 ELNP15502 786 aa8.52□□□□□ -1.05
PRPF40A-210ENST00000489741 MZF1P28698 734 aaPredicted RBP8.52□□□□□ -1.05
PRPF40A-210ENST00000489741 IL6STP40189 918 aaPredicted RBP8.52□□□□□ -1.05
PRPF40A-210ENST00000489741 FSTL1Q12841 308 aa8.52□□□□□ -1.05
PRPF40A-210ENST00000489741 GRIK4Q16099 956 aa8.52□□□□□ -1.05
PRPF40A-210ENST00000489741 GRIK5Q16478 980 aa8.52□□□□□ -1.05
PRPF40A-210ENST00000489741 GDF6Q6KF10 455 aaPredicted RBP8.52□□□□□ -1.05
PRPF40A-210ENST00000489741 TTC5Q8N0Z6 440 aa8.52□□□□□ -1.05
PRPF40A-210ENST00000489741 TTLL6Q8N841 843 aa8.52□□□□□ -1.05
PRPF40A-210ENST00000489741 TTC9Q92623 222 aa8.52□□□□□ -1.05
PRPF40A-210ENST00000489741 SPACA7Q96KW9 195 aa8.52□□□□□ -1.05
PRPF40A-210ENST00000489741 U2SURPO15042 1029 aaKnown RBP8.51□□□□□ -1.05
PRPF40A-210ENST00000489741 KCNQ3O43525 872 aa8.51□□□□□ -1.05
PRPF40A-210ENST00000489741 A1BGP04217 495 aa8.51□□□□□ -1.05
PRPF40A-210ENST00000489741 FKBP4Q02790 459 aaKnown RBP eCLIP8.51□□□□□ -1.05
PRPF40A-210ENST00000489741 TEFQ10587 303 aa8.51□□□□□ -1.05
PRPF40A-210ENST00000489741 TBC1D9BQ66K14 1250 aa8.51□□□□□ -1.05
PRPF40A-210ENST00000489741 FMNL2Q96PY5 1086 aa8.51□□□□□ -1.05
PRPF40A-210ENST00000489741 BRIP1Q9BX63 1249 aa8.51□□□□□ -1.05
PRPF40A-210ENST00000489741 TMEM63CQ9P1W3 806 aa8.51□□□□□ -1.05
PRPF40A-210ENST00000489741 BRCA1P38398 1863 aaKnown RBP8.51□□□□□ -1.05
PRPF40A-210ENST00000489741 KDM2BQ8NHM5 1336 aa8.51□□□□□ -1.05
PRPF40A-210ENST00000489741 CARMIL3Q8ND23 1372 aa8.5□□□□□ -1.05
PRPF40A-210ENST00000489741 GLTPD2A6NH11 291 aa8.5□□□□□ -1.05
PRPF40A-210ENST00000489741 H0YIN7 160 aa8.5□□□□□ -1.05
PRPF40A-210ENST00000489741 NFKBIEO00221 500 aa8.5□□□□□ -1.05
PRPF40A-210ENST00000489741 CAMTA2O94983 1202 aa8.5□□□□□ -1.05
PRPF40A-210ENST00000489741 LMNB1P20700 586 aa8.5□□□□□ -1.05
PRPF40A-210ENST00000489741 PRKAR2BP31323 418 aa8.5□□□□□ -1.05
PRPF40A-210ENST00000489741 PDE4CQ08493 712 aa8.5□□□□□ -1.05
PRPF40A-210ENST00000489741 PRR5LQ6MZQ0 368 aa8.5□□□□□ -1.05
PRPF40A-210ENST00000489741 C2CD5Q86YS7 1000 aa8.5□□□□□ -1.05
PRPF40A-210ENST00000489741 FMR1NBQ8N0W7 255 aaPredicted RBP8.5□□□□□ -1.05
PRPF40A-210ENST00000489741 POLIQ9UNA4 740 aa8.5□□□□□ -1.05
PRPF40A-210ENST00000489741 USP16Q9Y5T5 823 aa8.5□□□□□ -1.05
PRPF40A-210ENST00000489741 NRXN2Q9P2S2 1712 aa8.49□□□□□ -1.05
PRPF40A-210ENST00000489741 A6NHS1 94 aa8.49□□□□□ -1.05
PRPF40A-210ENST00000489741 BTBD11A6QL63 1104 aa8.49□□□□□ -1.05
PRPF40A-210ENST00000489741 CYP2E1P05181 493 aaPredicted RBP8.49□□□□□ -1.05
PRPF40A-210ENST00000489741 NPR3P17342 541 aa8.49□□□□□ -1.05
PRPF40A-210ENST00000489741 PPP2R1AP30153 589 aa8.49□□□□□ -1.05
PRPF40A-210ENST00000489741 GATA4P43694 442 aa8.49□□□□□ -1.05
PRPF40A-210ENST00000489741 COL13A1Q5TAT6 717 aaPredicted RBP8.49□□□□□ -1.05
PRPF40A-210ENST00000489741 NCAPG2Q86XI2 1143 aa8.49□□□□□ -1.05
PRPF40A-210ENST00000489741 DTWD1Q8N5C7 304 aa8.49□□□□□ -1.05
PRPF40A-210ENST00000489741 JMYQ8N9B5 988 aa8.49□□□□□ -1.05
PRPF40A-210ENST00000489741 ARFGEF1Q9Y6D6 1849 aa8.48□□□□□ -1.05
PRPF40A-210ENST00000489741 PRAMEF22A3QJZ6 481 aa8.48□□□□□ -1.05
PRPF40A-210ENST00000489741 KLRG2A4D1S0 409 aaPredicted RBP8.48□□□□□ -1.05
PRPF40A-210ENST00000489741 HTATSF1O43719 755 aaKnown RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms