RNA–Protein interactions for RNA: ENST00000489485.5

CLDN11-209, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 1,854 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-209ENST00000489485 CYP46A1Q9Y6A2 500 aa16.77■□□□□ 0.27
CLDN11-209ENST00000489485 PRC1O43663 620 aa16.76■□□□□ 0.27
CLDN11-209ENST00000489485 PTPRAP18433 802 aa16.76■□□□□ 0.27
CLDN11-209ENST00000489485 GUCY1A2P33402 732 aa16.76■□□□□ 0.27
CLDN11-209ENST00000489485 APLP1P51693 650 aa16.76■□□□□ 0.27
CLDN11-209ENST00000489485 DHX32Q7L7V1 743 aaKnown RBP16.76■□□□□ 0.27
CLDN11-209ENST00000489485 KANSL2Q9H9L4 492 aa16.76■□□□□ 0.27
CLDN11-209ENST00000489485 GINM1Q9NU53 330 aa16.76■□□□□ 0.27
CLDN11-209ENST00000489485 ZHX2Q9Y6X8 837 aa16.76■□□□□ 0.27
CLDN11-209ENST00000489485 GREB1LQ9C091 1923 aaPredicted RBP16.76■□□□□ 0.27
CLDN11-209ENST00000489485 UNCXA6NJT0 531 aa16.76■□□□□ 0.27
CLDN11-209ENST00000489485 USP17L5A8MUK1 530 aa16.76■□□□□ 0.27
CLDN11-209ENST00000489485 ICA1Q05084 483 aa16.76■□□□□ 0.27
CLDN11-209ENST00000489485 SART3Q15020 963 aaKnown RBP16.76■□□□□ 0.27
CLDN11-209ENST00000489485 ZSCAN10Q96SZ4 725 aaPredicted RBP16.76■□□□□ 0.27
CLDN11-209ENST00000489485 LRRC2Q9BYS8 371 aa16.76■□□□□ 0.27
CLDN11-209ENST00000489485 TLL2Q9Y6L7 1015 aa16.76■□□□□ 0.27
CLDN11-209ENST00000489485 PLIN4Q96Q06 1357 aa16.75■□□□□ 0.27
CLDN11-209ENST00000489485 ERICH2A1L162 156 aa16.75■□□□□ 0.27
CLDN11-209ENST00000489485 IFIT3O14879 490 aaKnown RBP16.75■□□□□ 0.27
CLDN11-209ENST00000489485 RPS6KB1P23443 525 aa16.75■□□□□ 0.27
CLDN11-209ENST00000489485 ANTXR2P58335 489 aa16.75■□□□□ 0.27
CLDN11-209ENST00000489485 FGD1P98174 961 aa16.75■□□□□ 0.27
CLDN11-209ENST00000489485 CNKSR2Q8WXI2 1034 aa16.75■□□□□ 0.27
CLDN11-209ENST00000489485 OTUD5Q96G74 571 aa16.75■□□□□ 0.27
CLDN11-209ENST00000489485 MTMR4Q9NYA4 1195 aa16.75■□□□□ 0.27
CLDN11-209ENST00000489485 MYH4Q9Y623 1939 aa16.75■□□□□ 0.27
CLDN11-209ENST00000489485 TNKSO95271 1327 aa16.74■□□□□ 0.27
CLDN11-209ENST00000489485 ERO1BQ86YB8 467 aa16.74■□□□□ 0.27
CLDN11-209ENST00000489485 AS3MTQ9HBK9 375 aa16.74■□□□□ 0.27
CLDN11-209ENST00000489485 TCP11L1Q9NUJ3 509 aa16.74■□□□□ 0.27
CLDN11-209ENST00000489485 CLIP2Q9UDT6 1046 aa16.74■□□□□ 0.27
CLDN11-209ENST00000489485 IGKV6D-41A0A0C4DH26 115 aa16.73■□□□□ 0.27
CLDN11-209ENST00000489485 TTLL1O95922 423 aa16.73■□□□□ 0.27
CLDN11-209ENST00000489485 EEF2P13639 858 aaKnown RBP16.73■□□□□ 0.27
CLDN11-209ENST00000489485 ZNF157P51786 506 aaPredicted RBP16.73■□□□□ 0.27
CLDN11-209ENST00000489485 TMEM67Q5HYA8 995 aa16.73■□□□□ 0.27
CLDN11-209ENST00000489485 OPTNQ96CV9 577 aa16.73■□□□□ 0.27
CLDN11-209ENST00000489485 PDRG1Q9NUG6 133 aa16.73■□□□□ 0.27
CLDN11-209ENST00000489485 SPDYE5A6NIY4 337 aa16.73■□□□□ 0.27
CLDN11-209ENST00000489485 TRIM75PA6NK02 468 aa16.73■□□□□ 0.27
CLDN11-209ENST00000489485 ST18O60284 1047 aa16.73■□□□□ 0.27
CLDN11-209ENST00000489485 ANP32AP39687 249 aaKnown RBP16.73■□□□□ 0.27
CLDN11-209ENST00000489485 EXOSC10Q01780 885 aaKnown RBP16.73■□□□□ 0.27
CLDN11-209ENST00000489485 SPP2Q13103 211 aa16.73■□□□□ 0.27
CLDN11-209ENST00000489485 CCDC178Q5BJE1 867 aa16.73■□□□□ 0.27
CLDN11-209ENST00000489485 RGMBQ6NW40 437 aa16.73■□□□□ 0.27
CLDN11-209ENST00000489485 PAXIP1Q6ZW49 1069 aaPredicted RBP16.73■□□□□ 0.27
CLDN11-209ENST00000489485 ENAHQ8N8S7 591 aaPredicted RBP16.73■□□□□ 0.27
CLDN11-209ENST00000489485 TMEM87BQ96K49 555 aa16.73■□□□□ 0.27
CLDN11-209ENST00000489485 ARHGEF10LQ9HCE6 1279 aa16.73■□□□□ 0.27
CLDN11-209ENST00000489485 CREBZFQ9NS37 354 aa16.73■□□□□ 0.27
CLDN11-209ENST00000489485 PHIPQ8WWQ0 1821 aa16.73■□□□□ 0.27
CLDN11-209ENST00000489485 CD2BP2O95400 341 aaKnown RBP16.72■□□□□ 0.27
CLDN11-209ENST00000489485 ECE1P42892 770 aa16.72■□□□□ 0.27
CLDN11-209ENST00000489485 PPATQ06203 517 aa16.72■□□□□ 0.27
CLDN11-209ENST00000489485 WTAPQ15007 396 aa16.72■□□□□ 0.27
CLDN11-209ENST00000489485 PPP4R3BQ5MIZ7 849 aa16.72■□□□□ 0.27
CLDN11-209ENST00000489485 IFIT1BQ5T764 474 aaKnown RBP16.72■□□□□ 0.27
CLDN11-209ENST00000489485 ZNF280CQ8ND82 737 aa16.72■□□□□ 0.27
CLDN11-209ENST00000489485 TTC14Q96N46 770 aa16.72■□□□□ 0.27
CLDN11-209ENST00000489485 FEZ1Q99689 392 aa16.72■□□□□ 0.27
CLDN11-209ENST00000489485 IRF6O14896 467 aa16.71■□□□□ 0.27
CLDN11-209ENST00000489485 RAD21O60216 631 aa16.71■□□□□ 0.27
CLDN11-209ENST00000489485 MKRN3Q13064 507 aaKnown RBP16.71■□□□□ 0.27
CLDN11-209ENST00000489485 ZYXQ15942 572 aaKnown RBP16.71■□□□□ 0.27
CLDN11-209ENST00000489485 RCSD1Q6JBY9 416 aa16.71■□□□□ 0.27
CLDN11-209ENST00000489485 Q6ZUG5 572 aa16.71■□□□□ 0.27
CLDN11-209ENST00000489485 DGKHQ86XP1 1220 aa16.71■□□□□ 0.27
CLDN11-209ENST00000489485 SIAH1Q8IUQ4 282 aa16.71■□□□□ 0.27
CLDN11-209ENST00000489485 ACER1Q8TDN7 264 aa16.71■□□□□ 0.27
CLDN11-209ENST00000489485 IGDCC4Q8TDY8 1250 aa16.71■□□□□ 0.27
CLDN11-209ENST00000489485 LARP6Q9BRS8 491 aaKnown RBP16.71■□□□□ 0.27
CLDN11-209ENST00000489485 GPHNQ9NQX3 736 aaPredicted RBP16.71■□□□□ 0.27
CLDN11-209ENST00000489485 NYAP2Q9P242 653 aa16.71■□□□□ 0.27
CLDN11-209ENST00000489485 WDR19Q8NEZ3 1342 aa16.71■□□□□ 0.27
CLDN11-209ENST00000489485 A0A1W2PRG0 241 aa16.71■□□□□ 0.27
CLDN11-209ENST00000489485 USP17L10C9JJH3 530 aa16.71■□□□□ 0.27
CLDN11-209ENST00000489485 AK2P54819 239 aa16.71■□□□□ 0.27
CLDN11-209ENST00000489485 GRM1Q13255 1194 aa16.71■□□□□ 0.27
CLDN11-209ENST00000489485 NOL8Q76FK4 1167 aaKnown RBP16.71■□□□□ 0.27
CLDN11-209ENST00000489485 LRRC47Q8N1G4 583 aaKnown RBP16.71■□□□□ 0.27
CLDN11-209ENST00000489485 MTA3Q9BTC8 594 aa16.71■□□□□ 0.27
CLDN11-209ENST00000489485 AFG3L2Q9Y4W6 797 aa16.71■□□□□ 0.27
CLDN11-209ENST00000489485 C1QTNF8P60827 252 aa16.7■□□□□ 0.26
CLDN11-209ENST00000489485 MTMR2Q13614 643 aa16.7■□□□□ 0.26
CLDN11-209ENST00000489485 SEC23AQ15436 765 aa16.7■□□□□ 0.26
CLDN11-209ENST00000489485 NFXL1Q6ZNB6 911 aa16.7■□□□□ 0.26
CLDN11-209ENST00000489485 WNK4Q96J92 1243 aa16.7■□□□□ 0.26
CLDN11-209ENST00000489485 TMEM47Q9BQJ4 181 aa16.7■□□□□ 0.26
CLDN11-209ENST00000489485 WDR18Q9BV38 432 aa16.7■□□□□ 0.26
CLDN11-209ENST00000489485 TBC1D2Q9BYX2 928 aa16.7■□□□□ 0.26
CLDN11-209ENST00000489485 SH2D4AQ9H788 454 aa16.7■□□□□ 0.26
CLDN11-209ENST00000489485 KAT14Q9H8E8 782 aa16.7■□□□□ 0.26
CLDN11-209ENST00000489485 SENP2Q9HC62 589 aa16.7■□□□□ 0.26
CLDN11-209ENST00000489485 MTMR7Q9Y216 660 aa16.7■□□□□ 0.26
CLDN11-209ENST00000489485 SH2B2O14492 632 aaPredicted RBP16.69■□□□□ 0.26
CLDN11-209ENST00000489485 TOP1P11387 765 aaKnown RBP16.69■□□□□ 0.26
CLDN11-209ENST00000489485 HTRA3P83110 453 aa16.69■□□□□ 0.26
CLDN11-209ENST00000489485 PPIL2Q13356 520 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms