RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 TMEM67Q5HYA8 995 aa9.88□□□□□ -0.83
EXOSC3-206ENST00000489414 KIAA0319Q5VV43 1072 aa9.88□□□□□ -0.83
EXOSC3-206ENST00000489414 ASIC4Q96FT7 647 aa9.88□□□□□ -0.83
EXOSC3-206ENST00000489414 SIN3AQ96ST3 1273 aa9.88□□□□□ -0.83
EXOSC3-206ENST00000489414 ISCA1Q9BUE6 129 aa9.88□□□□□ -0.83
EXOSC3-206ENST00000489414 MIS18AQ9NYP9 233 aa9.88□□□□□ -0.83
EXOSC3-206ENST00000489414 FAM50BQ9Y247 325 aa9.88□□□□□ -0.83
EXOSC3-206ENST00000489414 DCDC2CA8MYV0 355 aa9.87□□□□□ -0.83
EXOSC3-206ENST00000489414 H3BQ06 376 aaPredicted RBP9.87□□□□□ -0.83
EXOSC3-206ENST00000489414 IGHA2P01877 340 aa9.87□□□□□ -0.83
EXOSC3-206ENST00000489414 FGBP02675 491 aa9.87□□□□□ -0.83
EXOSC3-206ENST00000489414 ANXA1P04083 346 aa9.87□□□□□ -0.83
EXOSC3-206ENST00000489414 PTPRAP18433 802 aa9.87□□□□□ -0.83
EXOSC3-206ENST00000489414 EIF4A1P60842 406 aaKnown RBP9.87□□□□□ -0.83
EXOSC3-206ENST00000489414 RSPO4Q2I0M5 234 aaPredicted RBP9.87□□□□□ -0.83
EXOSC3-206ENST00000489414 OTOP2Q7RTS6 562 aa9.87□□□□□ -0.83
EXOSC3-206ENST00000489414 POP1Q99575 1024 aaKnown RBP9.87□□□□□ -0.83
EXOSC3-206ENST00000489414 BMP2KQ9NSY1 1161 aaPredicted RBP9.87□□□□□ -0.83
EXOSC3-206ENST00000489414 SLC4A7Q9Y6M7 1214 aa9.87□□□□□ -0.83
EXOSC3-206ENST00000489414 APBB1O00213 710 aa9.86□□□□□ -0.83
EXOSC3-206ENST00000489414 IL1R1P14778 569 aa9.86□□□□□ -0.83
EXOSC3-206ENST00000489414 MAPK4P31152 587 aa9.86□□□□□ -0.83
EXOSC3-206ENST00000489414 CRKP46108 304 aa9.86□□□□□ -0.83
EXOSC3-206ENST00000489414 COL9A3Q14050 684 aaPredicted RBP9.86□□□□□ -0.83
EXOSC3-206ENST00000489414 TAF7Q15545 349 aaPredicted RBP9.86□□□□□ -0.83
EXOSC3-206ENST00000489414 FKBP1CQ5VVH2 108 aa9.86□□□□□ -0.83
EXOSC3-206ENST00000489414 ANO1Q5XXA6 986 aa9.86□□□□□ -0.83
EXOSC3-206ENST00000489414 GPR142Q7Z601 462 aa9.86□□□□□ -0.83
EXOSC3-206ENST00000489414 MORC1Q86VD1 984 aa9.86□□□□□ -0.83
EXOSC3-206ENST00000489414 CCDC85AQ96PX6 553 aaPredicted RBP9.86□□□□□ -0.83
EXOSC3-206ENST00000489414 TTF2Q9UNY4 1162 aaKnown RBP9.86□□□□□ -0.83
EXOSC3-206ENST00000489414 A0A1W2PQ45 241 aaPredicted RBP9.85□□□□□ -0.83
EXOSC3-206ENST00000489414 A0A1W2PQY0 241 aa9.85□□□□□ -0.83
EXOSC3-206ENST00000489414 ATP2A2P16615 1042 aaKnown RBP9.85□□□□□ -0.83
EXOSC3-206ENST00000489414 SIGLEC14Q08ET2 396 aa9.85□□□□□ -0.83
EXOSC3-206ENST00000489414 SCYL3Q8IZE3 742 aa9.85□□□□□ -0.83
EXOSC3-206ENST00000489414 PROCA1Q8NCQ7 364 aaPredicted RBP9.85□□□□□ -0.83
EXOSC3-206ENST00000489414 XAGE3Q8WTP9 111 aa9.85□□□□□ -0.83
EXOSC3-206ENST00000489414 PHACTR3Q96KR7 559 aa9.85□□□□□ -0.83
EXOSC3-206ENST00000489414 ASCC2Q9H1I8 757 aaPredicted RBP9.85□□□□□ -0.83
EXOSC3-206ENST00000489414 WDFY3Q8IZQ1 3526 aa9.85□□□□□ -0.83
EXOSC3-206ENST00000489414 NBEAQ8NFP9 2946 aa9.85□□□□□ -0.83
EXOSC3-206ENST00000489414 COL4A3Q01955 1670 aa9.84□□□□□ -0.83
EXOSC3-206ENST00000489414 A0A1B0GUL6 1792 aa9.84□□□□□ -0.83
EXOSC3-206ENST00000489414 TRIM75PA6NK02 468 aa9.84□□□□□ -0.83
EXOSC3-206ENST00000489414 SEPT4O43236 478 aa9.84□□□□□ -0.83
EXOSC3-206ENST00000489414 DIAPH1O60610 1272 aaKnown RBP9.84□□□□□ -0.83
EXOSC3-206ENST00000489414 PEX10O60683 326 aa9.84□□□□□ -0.83
EXOSC3-206ENST00000489414 CYP2C19P33261 490 aa9.84□□□□□ -0.83
EXOSC3-206ENST00000489414 AIMP1Q12904 312 aaKnown RBP9.84□□□□□ -0.83
EXOSC3-206ENST00000489414 DCTN1Q14203 1278 aa9.84□□□□□ -0.83
EXOSC3-206ENST00000489414 SPRED2Q7Z698 418 aa9.84□□□□□ -0.83
EXOSC3-206ENST00000489414 GDPD5Q8WTR4 605 aa9.84□□□□□ -0.83
EXOSC3-206ENST00000489414 RTF1Q92541 710 aaKnown RBP9.84□□□□□ -0.83
EXOSC3-206ENST00000489414 CDC5LQ99459 802 aaKnown RBP9.84□□□□□ -0.83
EXOSC3-206ENST00000489414 TXNRD2Q9NNW7 524 aa9.84□□□□□ -0.83
EXOSC3-206ENST00000489414 DOCK1Q14185 1865 aa9.84□□□□□ -0.83
EXOSC3-206ENST00000489414 ATP5J2-PTCD1G3V325 749 aa9.83□□□□□ -0.84
EXOSC3-206ENST00000489414 MAP3K13O43283 966 aa9.83□□□□□ -0.84
EXOSC3-206ENST00000489414 HSP90B1P14625 803 aaKnown RBP9.83□□□□□ -0.84
EXOSC3-206ENST00000489414 FAM47AQ5JRC9 791 aa9.83□□□□□ -0.84
EXOSC3-206ENST00000489414 PLEKHH3Q7Z736 793 aa9.83□□□□□ -0.84
EXOSC3-206ENST00000489414 GPRC5AQ8NFJ5 357 aa9.83□□□□□ -0.84
EXOSC3-206ENST00000489414 EDC3Q96F86 508 aaKnown RBP9.83□□□□□ -0.84
EXOSC3-206ENST00000489414 PORCNQ9H237 461 aa9.83□□□□□ -0.84
EXOSC3-206ENST00000489414 PICK1Q9NRD5 415 aa9.83□□□□□ -0.84
EXOSC3-206ENST00000489414 CEP295Q9C0D2 2601 aa9.83□□□□□ -0.84
EXOSC3-206ENST00000489414 PHF20L1A8MW92 1017 aa9.82□□□□□ -0.84
EXOSC3-206ENST00000489414 ATXN1P54253 815 aaKnown RBP9.82□□□□□ -0.84
EXOSC3-206ENST00000489414 SMAD2Q15796 467 aaKnown RBP9.82□□□□□ -0.84
EXOSC3-206ENST00000489414 PPP1R12CQ9BZL4 782 aa9.82□□□□□ -0.84
EXOSC3-206ENST00000489414 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.82□□□□□ -0.84
EXOSC3-206ENST00000489414 TNKSO95271 1327 aa9.82□□□□□ -0.84
EXOSC3-206ENST00000489414 PDE8AO60658 829 aa9.81□□□□□ -0.84
EXOSC3-206ENST00000489414 HOXC6P09630 235 aa9.81□□□□□ -0.84
EXOSC3-206ENST00000489414 ATP2B2Q01814 1243 aa9.81□□□□□ -0.84
EXOSC3-206ENST00000489414 PABPC4Q13310 644 aaKnown RBP eCLIP9.81□□□□□ -0.84
EXOSC3-206ENST00000489414 MFSD14BQ5SR56 506 aa9.81□□□□□ -0.84
EXOSC3-206ENST00000489414 C15orf52Q6ZUT6 534 aaKnown RBP9.81□□□□□ -0.84
EXOSC3-206ENST00000489414 TMOD2Q9NZR1 351 aa9.81□□□□□ -0.84
EXOSC3-206ENST00000489414 DBF4Q9UBU7 674 aaPredicted RBP9.81□□□□□ -0.84
EXOSC3-206ENST00000489414 TEP1Q99973 2627 aaKnown RBP9.81□□□□□ -0.84
EXOSC3-206ENST00000489414 ZNF462Q96JM2 2506 aa9.81□□□□□ -0.84
EXOSC3-206ENST00000489414 LMNAP02545 664 aaKnown RBP9.8□□□□□ -0.84
EXOSC3-206ENST00000489414 TRIM28Q13263 835 aaKnown RBP9.8□□□□□ -0.84
EXOSC3-206ENST00000489414 NEUROD1Q13562 356 aa9.8□□□□□ -0.84
EXOSC3-206ENST00000489414 COL19A1Q14993 1142 aa9.8□□□□□ -0.84
EXOSC3-206ENST00000489414 RASEFQ8IZ41 740 aa9.8□□□□□ -0.84
EXOSC3-206ENST00000489414 CRACR2BQ8N4Y2 399 aaPredicted RBP9.8□□□□□ -0.84
EXOSC3-206ENST00000489414 SMCHD1A6NHR9 2005 aa9.8□□□□□ -0.84
EXOSC3-206ENST00000489414 MROH7Q68CQ1 1323 aa9.8□□□□□ -0.84
EXOSC3-206ENST00000489414 ZBBXA8MT70 800 aa9.79□□□□□ -0.84
EXOSC3-206ENST00000489414 PDGFBP01127 241 aaPredicted RBP9.79□□□□□ -0.84
EXOSC3-206ENST00000489414 SDHBP21912 280 aa9.79□□□□□ -0.84
EXOSC3-206ENST00000489414 CYP2C18P33260 490 aa9.79□□□□□ -0.84
EXOSC3-206ENST00000489414 TIE1P35590 1138 aa9.79□□□□□ -0.84
EXOSC3-206ENST00000489414 ERVK-9P63128 1117 aa9.79□□□□□ -0.84
EXOSC3-206ENST00000489414 ERVK-24P63145 666 aa9.79□□□□□ -0.84
EXOSC3-206ENST00000489414 Q3C1V9 767 aa9.79□□□□□ -0.84
EXOSC3-206ENST00000489414 LRSAM1Q6UWE0 723 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms