RNA–Protein interactions for RNA: ENST00000489313.1

PTP4A2-206, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 2

Gene PTP4A2, Length 1,551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-206ENST00000489313 TRMT44Q8IYL2 757 aaKnown RBP13.24□□□□□ -0.29
PTP4A2-206ENST00000489313 FRAT1Q92837 279 aaPredicted RBP13.24□□□□□ -0.29
PTP4A2-206ENST00000489313 CLUAP1Q96AJ1 413 aa13.24□□□□□ -0.29
PTP4A2-206ENST00000489313 NDUFB9Q9Y6M9 179 aa13.24□□□□□ -0.29
PTP4A2-206ENST00000489313 FPGT-TNNI3KV9GXZ4 949 aa13.24□□□□□ -0.29
PTP4A2-206ENST00000489313 SPTBN5Q9NRC6 3674 aaKnown RBP13.23□□□□□ -0.29
PTP4A2-206ENST00000489313 GH2P01242 217 aa13.23□□□□□ -0.29
PTP4A2-206ENST00000489313 ZAP70P43403 619 aa13.23□□□□□ -0.29
PTP4A2-206ENST00000489313 MDM2Q00987 491 aaPredicted RBP13.23□□□□□ -0.29
PTP4A2-206ENST00000489313 CCDC158Q5M9N0 1113 aa13.23□□□□□ -0.29
PTP4A2-206ENST00000489313 USP17L2Q6R6M4 530 aa13.23□□□□□ -0.29
PTP4A2-206ENST00000489313 APBA2Q99767 749 aa13.23□□□□□ -0.29
PTP4A2-206ENST00000489313 CWC22Q9HCG8 908 aaKnown RBP13.23□□□□□ -0.29
PTP4A2-206ENST00000489313 PIH1D3Q9NQM4 214 aaKnown RBP13.23□□□□□ -0.29
PTP4A2-206ENST00000489313 GINM1Q9NU53 330 aa13.23□□□□□ -0.29
PTP4A2-206ENST00000489313 MTMR10Q9NXD2 777 aa13.23□□□□□ -0.29
PTP4A2-206ENST00000489313 CDH23Q9H251 3354 aa13.23□□□□□ -0.29
PTP4A2-206ENST00000489313 HLA-DOAP06340 250 aa13.22□□□□□ -0.29
PTP4A2-206ENST00000489313 OS9Q13438 667 aaPredicted RBP13.22□□□□□ -0.29
PTP4A2-206ENST00000489313 ATF7IPQ6VMQ6 1270 aa13.22□□□□□ -0.29
PTP4A2-206ENST00000489313 FEZ1Q99689 392 aa13.22□□□□□ -0.29
PTP4A2-206ENST00000489313 GPR108Q9NPR9 543 aa13.22□□□□□ -0.29
PTP4A2-206ENST00000489313 STXBP5LQ9Y2K9 1186 aa13.22□□□□□ -0.29
PTP4A2-206ENST00000489313 IPO8O15397 1037 aaKnown RBP13.21□□□□□ -0.29
PTP4A2-206ENST00000489313 BCAR3O75815 825 aa13.21□□□□□ -0.29
PTP4A2-206ENST00000489313 CNMDO75829 334 aa13.21□□□□□ -0.29
PTP4A2-206ENST00000489313 CYP7A1P22680 504 aa13.21□□□□□ -0.29
PTP4A2-206ENST00000489313 MAP2K5Q13163 448 aa13.21□□□□□ -0.29
PTP4A2-206ENST00000489313 WDR78Q5VTH9 848 aa13.21□□□□□ -0.29
PTP4A2-206ENST00000489313 MIGA1Q8NAN2 632 aa13.21□□□□□ -0.29
PTP4A2-206ENST00000489313 GTF3C2Q8WUA4 911 aaPredicted RBP13.21□□□□□ -0.29
PTP4A2-206ENST00000489313 FLRT1Q9NZU1 646 aa13.21□□□□□ -0.29
PTP4A2-206ENST00000489313 EDC3Q96F86 508 aaKnown RBP13.2□□□□□ -0.3
PTP4A2-206ENST00000489313 TLR7Q9NYK1 1049 aaKnown RBP13.2□□□□□ -0.3
PTP4A2-206ENST00000489313 RABGAP1Q9Y3P9 1069 aa13.2□□□□□ -0.3
PTP4A2-206ENST00000489313 USP17L15C9J2P7 530 aa13.2□□□□□ -0.3
PTP4A2-206ENST00000489313 USP17L13C9JLJ4 530 aa13.2□□□□□ -0.3
PTP4A2-206ENST00000489313 USP17L11C9JVI0 530 aa13.2□□□□□ -0.3
PTP4A2-206ENST00000489313 USP17L18D6R9N7 530 aa13.2□□□□□ -0.3
PTP4A2-206ENST00000489313 USP17L22D6RA61 530 aa13.2□□□□□ -0.3
PTP4A2-206ENST00000489313 USP17L17D6RBQ6 530 aa13.2□□□□□ -0.3
PTP4A2-206ENST00000489313 USP17L19D6RCP7 530 aa13.2□□□□□ -0.3
PTP4A2-206ENST00000489313 USP17L20D6RJB6 530 aa13.2□□□□□ -0.3
PTP4A2-206ENST00000489313 SURF6O75683 361 aaKnown RBP13.2□□□□□ -0.3
PTP4A2-206ENST00000489313 IDH1O75874 414 aaKnown RBP13.2□□□□□ -0.3
PTP4A2-206ENST00000489313 USP17L24Q0WX57 530 aa13.2□□□□□ -0.3
PTP4A2-206ENST00000489313 RAB3GAP1Q15042 981 aa13.2□□□□□ -0.3
PTP4A2-206ENST00000489313 TMEM57Q8N5G2 664 aa13.2□□□□□ -0.3
PTP4A2-206ENST00000489313 ACER1Q8TDN7 264 aa13.2□□□□□ -0.3
PTP4A2-206ENST00000489313 C12orf42Q96LP6 360 aa13.2□□□□□ -0.3
PTP4A2-206ENST00000489313 SENP6Q9GZR1 1112 aaPredicted RBP13.2□□□□□ -0.3
PTP4A2-206ENST00000489313 C1orf115Q9H7X2 142 aa13.2□□□□□ -0.3
PTP4A2-206ENST00000489313 DBNLQ9UJU6 430 aaKnown RBP13.2□□□□□ -0.3
PTP4A2-206ENST00000489313 GLRX3O76003 335 aaKnown RBP13.19□□□□□ -0.3
PTP4A2-206ENST00000489313 CNGA1P29973 690 aa13.19□□□□□ -0.3
PTP4A2-206ENST00000489313 USP5P45974 858 aa13.19□□□□□ -0.3
PTP4A2-206ENST00000489313 CCNA1P78396 465 aa13.19□□□□□ -0.3
PTP4A2-206ENST00000489313 MFSD14CQ5VZR4 134 aa13.19□□□□□ -0.3
PTP4A2-206ENST00000489313 TATDN1Q6P1N9 297 aa13.19□□□□□ -0.3
PTP4A2-206ENST00000489313 CATSPERGQ6ZRH7 1159 aa13.19□□□□□ -0.3
PTP4A2-206ENST00000489313 SSH3Q8TE77 659 aa13.19□□□□□ -0.3
PTP4A2-206ENST00000489313 ZNF512BQ96KM6 892 aaPredicted RBP13.19□□□□□ -0.3
PTP4A2-206ENST00000489313 CCDC8Q9H0W5 538 aaPredicted RBP13.19□□□□□ -0.3
PTP4A2-206ENST00000489313 BTBD7Q9P203 1132 aa13.19□□□□□ -0.3
PTP4A2-206ENST00000489313 SLC15A5A6NIM6 579 aa13.18□□□□□ -0.3
PTP4A2-206ENST00000489313 VCAM1P19320 739 aa13.18□□□□□ -0.3
PTP4A2-206ENST00000489313 PTPREP23469 700 aa13.18□□□□□ -0.3
PTP4A2-206ENST00000489313 ATN1P54259 1190 aaPredicted RBP13.18□□□□□ -0.3
PTP4A2-206ENST00000489313 MAGEB6Q8N7X4 407 aa13.18□□□□□ -0.3
PTP4A2-206ENST00000489313 SERPINB13Q9UIV8 391 aa13.18□□□□□ -0.3
PTP4A2-206ENST00000489313 CYP2C19P33261 490 aa13.17□□□□□ -0.3
PTP4A2-206ENST00000489313 ATP8B2P98198 1209 aa13.17□□□□□ -0.3
PTP4A2-206ENST00000489313 ATP2B2Q01814 1243 aa13.17□□□□□ -0.3
PTP4A2-206ENST00000489313 ABCB5Q2M3G0 1257 aa13.17□□□□□ -0.3
PTP4A2-206ENST00000489313 CERKLQ49MI3 558 aaPredicted RBP13.17□□□□□ -0.3
PTP4A2-206ENST00000489313 NPLOC4Q8TAT6 608 aa13.17□□□□□ -0.3
PTP4A2-206ENST00000489313 FAM161BQ96MY7 647 aa13.17□□□□□ -0.3
PTP4A2-206ENST00000489313 LBHD1Q9BQE6 289 aaPredicted RBP13.17□□□□□ -0.3
PTP4A2-206ENST00000489313 KIAA1683Q9H0B3 1180 aa13.17□□□□□ -0.3
PTP4A2-206ENST00000489313 DDX20Q9UHI6 824 aaKnown RBP13.17□□□□□ -0.3
PTP4A2-206ENST00000489313 IVNS1ABPQ9Y6Y0 642 aa13.17□□□□□ -0.3
PTP4A2-206ENST00000489313 LTBP2Q14767 1821 aa13.17□□□□□ -0.3
PTP4A2-206ENST00000489313 USP14P54578 494 aa13.16□□□□□ -0.3
PTP4A2-206ENST00000489313 GRB14Q14449 540 aa13.16□□□□□ -0.3
PTP4A2-206ENST00000489313 TRPV1Q8NER1 839 aa13.16□□□□□ -0.3
PTP4A2-206ENST00000489313 EAF2Q96CJ1 260 aaPredicted RBP13.16□□□□□ -0.3
PTP4A2-206ENST00000489313 EHD4Q9H223 541 aa13.16□□□□□ -0.3
PTP4A2-206ENST00000489313 RPAP3Q9H6T3 665 aaPredicted RBP13.16□□□□□ -0.3
PTP4A2-206ENST00000489313 ANTXR1Q9H6X2 564 aa13.16□□□□□ -0.3
PTP4A2-206ENST00000489313 NAV1Q8NEY1 1877 aa13.16□□□□□ -0.3
PTP4A2-206ENST00000489313 RLFQ13129 1914 aa13.16□□□□□ -0.3
PTP4A2-206ENST00000489313 SPDYE16A6NNV3 312 aaPredicted RBP13.15□□□□□ -0.3
PTP4A2-206ENST00000489313 POTEB2H3BUK9 544 aa13.15□□□□□ -0.3
PTP4A2-206ENST00000489313 IGSF3O75054 1194 aa13.15□□□□□ -0.3
PTP4A2-206ENST00000489313 HOXC6P09630 235 aa13.15□□□□□ -0.3
PTP4A2-206ENST00000489313 SHMT1P34896 483 aa13.15□□□□□ -0.3
PTP4A2-206ENST00000489313 PLCD1P51178 756 aa13.15□□□□□ -0.3
PTP4A2-206ENST00000489313 TTC6Q86TZ1 520 aa13.15□□□□□ -0.3
PTP4A2-206ENST00000489313 LPAR1Q92633 364 aa13.15□□□□□ -0.3
PTP4A2-206ENST00000489313 GUCD1Q96NT3 240 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms