RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 RCSD1Q6JBY9 416 aa11.67□□□□□ -0.54
USP11-211ENST00000489111 DPY19L2Q6NUT2 758 aa11.67□□□□□ -0.54
USP11-211ENST00000489111 APOBEC3FQ8IUX4 373 aaKnown RBP11.67□□□□□ -0.54
USP11-211ENST00000489111 TRIM22Q8IYM9 498 aa11.67□□□□□ -0.54
USP11-211ENST00000489111 FANCBQ8NB91 859 aa11.67□□□□□ -0.54
USP11-211ENST00000489111 FOXD4L4Q8WXT5 416 aaPredicted RBP11.67□□□□□ -0.54
USP11-211ENST00000489111 TNPO1Q92973 898 aaKnown RBP11.67□□□□□ -0.54
USP11-211ENST00000489111 CEP95Q96GE4 821 aa11.67□□□□□ -0.54
USP11-211ENST00000489111 DNAJC18Q9H819 358 aa11.67□□□□□ -0.54
USP11-211ENST00000489111 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.67□□□□□ -0.54
USP11-211ENST00000489111 ORC3Q9UBD5 711 aaPredicted RBP11.67□□□□□ -0.54
USP11-211ENST00000489111 ZC3H4Q9UPT8 1303 aaKnown RBP11.66□□□□□ -0.54
USP11-211ENST00000489111 PPFIA3O75145 1194 aa11.66□□□□□ -0.54
USP11-211ENST00000489111 DDNO94850 711 aaPredicted RBP11.66□□□□□ -0.54
USP11-211ENST00000489111 TTLL1O95922 423 aa11.66□□□□□ -0.54
USP11-211ENST00000489111 ZSCAN22P10073 491 aaPredicted RBP11.66□□□□□ -0.54
USP11-211ENST00000489111 IFNAR1P17181 557 aa11.66□□□□□ -0.54
USP11-211ENST00000489111 CDC27P30260 824 aa11.66□□□□□ -0.54
USP11-211ENST00000489111 ADD1P35611 737 aaKnown RBP11.66□□□□□ -0.54
USP11-211ENST00000489111 AKAP17AQ02040 695 aaKnown RBP11.66□□□□□ -0.54
USP11-211ENST00000489111 SSRP1Q08945 709 aaKnown RBP11.66□□□□□ -0.54
USP11-211ENST00000489111 TROAPQ12815 778 aa11.66□□□□□ -0.54
USP11-211ENST00000489111 RASA3Q14644 834 aa11.66□□□□□ -0.54
USP11-211ENST00000489111 ABCB5Q2M3G0 1257 aa11.66□□□□□ -0.54
USP11-211ENST00000489111 TMEM179Q6ZVK1 233 aa11.66□□□□□ -0.54
USP11-211ENST00000489111 METTL16Q86W50 562 aaKnown RBP11.66□□□□□ -0.54
USP11-211ENST00000489111 TRPM4Q8TD43 1214 aa11.66□□□□□ -0.54
USP11-211ENST00000489111 WASF1Q92558 559 aa11.66□□□□□ -0.54
USP11-211ENST00000489111 TMEM47Q9BQJ4 181 aa11.66□□□□□ -0.54
USP11-211ENST00000489111 CABP5Q9NP86 173 aa11.66□□□□□ -0.54
USP11-211ENST00000489111 MTMR4Q9NYA4 1195 aa11.66□□□□□ -0.54
USP11-211ENST00000489111 HACL1Q9UJ83 578 aa11.66□□□□□ -0.54
USP11-211ENST00000489111 FOCADQ5VW36 1801 aa11.65□□□□□ -0.54
USP11-211ENST00000489111 STK36Q9NRP7 1315 aa11.65□□□□□ -0.54
USP11-211ENST00000489111 IGKV6D-41A0A0C4DH26 115 aa11.65□□□□□ -0.54
USP11-211ENST00000489111 FMNL1O95466 1100 aaPredicted RBP11.65□□□□□ -0.54
USP11-211ENST00000489111 EPS15P42566 896 aa11.65□□□□□ -0.54
USP11-211ENST00000489111 GNAQP50148 359 aa11.65□□□□□ -0.54
USP11-211ENST00000489111 FOSBP53539 338 aa11.65□□□□□ -0.54
USP11-211ENST00000489111 ATP2B2Q01814 1243 aa11.65□□□□□ -0.54
USP11-211ENST00000489111 ANGEL2Q5VTE6 544 aaKnown RBP11.65□□□□□ -0.54
USP11-211ENST00000489111 TATDN1Q6P1N9 297 aa11.65□□□□□ -0.54
USP11-211ENST00000489111 PHKBQ93100 1093 aa11.65□□□□□ -0.54
USP11-211ENST00000489111 HOOK2Q96ED9 719 aa11.65□□□□□ -0.54
USP11-211ENST00000489111 MAP3K14Q99558 947 aa11.65□□□□□ -0.54
USP11-211ENST00000489111 SLC26A6Q9BXS9 759 aa11.65□□□□□ -0.54
USP11-211ENST00000489111 ADARB2Q9NS39 739 aaKnown RBP11.65□□□□□ -0.54
USP11-211ENST00000489111 FAM217BQ9NTX9 383 aaPredicted RBP11.65□□□□□ -0.54
USP11-211ENST00000489111 GGA3Q9NZ52 723 aa11.65□□□□□ -0.54
USP11-211ENST00000489111 MTMR7Q9Y216 660 aa11.65□□□□□ -0.54
USP11-211ENST00000489111 ZDHHC9Q9Y397 364 aa11.65□□□□□ -0.54
USP11-211ENST00000489111 ATP6V1DQ9Y5K8 247 aa11.65□□□□□ -0.54
USP11-211ENST00000489111 ASTN2O75129 1339 aaPredicted RBP11.64□□□□□ -0.55
USP11-211ENST00000489111 GOLGA6L22H0YM25 854 aa11.64□□□□□ -0.55
USP11-211ENST00000489111 GDF11O95390 407 aa11.64□□□□□ -0.55
USP11-211ENST00000489111 ICA1Q05084 483 aa11.64□□□□□ -0.55
USP11-211ENST00000489111 TRIM29Q14134 588 aa11.64□□□□□ -0.55
USP11-211ENST00000489111 GRM4Q14833 912 aa11.64□□□□□ -0.55
USP11-211ENST00000489111 TMTC3Q6ZXV5 915 aa11.64□□□□□ -0.55
USP11-211ENST00000489111 CLEC10AQ8IUN9 316 aa11.64□□□□□ -0.55
USP11-211ENST00000489111 C8orf76Q96K31 380 aa11.64□□□□□ -0.55
USP11-211ENST00000489111 ALG1Q9BT22 464 aa11.64□□□□□ -0.55
USP11-211ENST00000489111 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.64□□□□□ -0.55
USP11-211ENST00000489111 DEFB129Q9H1M3 183 aa11.64□□□□□ -0.55
USP11-211ENST00000489111 KANSL2Q9H9L4 492 aa11.64□□□□□ -0.55
USP11-211ENST00000489111 CLIP2Q9UDT6 1046 aa11.64□□□□□ -0.55
USP11-211ENST00000489111 MTMR6Q9Y217 621 aa11.64□□□□□ -0.55
USP11-211ENST00000489111 GOLGB1Q14789 3259 aaKnown RBP11.63□□□□□ -0.55
USP11-211ENST00000489111 DDX11L8A8MPP1 907 aa11.63□□□□□ -0.55
USP11-211ENST00000489111 TBC1D12O60347 775 aa11.63□□□□□ -0.55
USP11-211ENST00000489111 PLEKHA8P1O95397 391 aa11.63□□□□□ -0.55
USP11-211ENST00000489111 DEXIO95424 95 aa11.63□□□□□ -0.55
USP11-211ENST00000489111 F13A1P00488 732 aa11.63□□□□□ -0.55
USP11-211ENST00000489111 GH2P01242 217 aa11.63□□□□□ -0.55
USP11-211ENST00000489111 SLURP2P0DP57 97 aa11.63□□□□□ -0.55
USP11-211ENST00000489111 NOVP48745 357 aa11.63□□□□□ -0.55
USP11-211ENST00000489111 NFKBIBQ15653 356 aa11.63□□□□□ -0.55
USP11-211ENST00000489111 NTRK3Q16288 839 aa11.63□□□□□ -0.55
USP11-211ENST00000489111 DCAF15Q66K64 600 aa11.63□□□□□ -0.55
USP11-211ENST00000489111 CDC37L1Q7L3B6 337 aa11.63□□□□□ -0.55
USP11-211ENST00000489111 LRRC47Q8N1G4 583 aaKnown RBP11.63□□□□□ -0.55
USP11-211ENST00000489111 CCDC82Q8N4S0 544 aa11.63□□□□□ -0.55
USP11-211ENST00000489111 LZTS2Q9BRK4 669 aa11.63□□□□□ -0.55
USP11-211ENST00000489111 RNF26Q9BY78 433 aaPredicted RBP11.63□□□□□ -0.55
USP11-211ENST00000489111 PPP2R3BQ9Y5P8 575 aa11.63□□□□□ -0.55
USP11-211ENST00000489111 CDK5RAP2Q96SN8 1893 aa11.63□□□□□ -0.55
USP11-211ENST00000489111 ECM29Q5VYK3 1845 aa11.63□□□□□ -0.55
USP11-211ENST00000489111 PARP1P09874 1014 aaKnown RBP11.62□□□□□ -0.55
USP11-211ENST00000489111 FDPSP14324 419 aaKnown RBP11.62□□□□□ -0.55
USP11-211ENST00000489111 NBR1Q14596 966 aa11.62□□□□□ -0.55
USP11-211ENST00000489111 SEPT2Q15019 361 aa11.62□□□□□ -0.55
USP11-211ENST00000489111 MCTP1Q6DN14 999 aa11.62□□□□□ -0.55
USP11-211ENST00000489111 MIGA2Q7L4E1 593 aa11.62□□□□□ -0.55
USP11-211ENST00000489111 CDAN1Q8IWY9 1227 aa11.62□□□□□ -0.55
USP11-211ENST00000489111 CMTR1Q8N1G2 835 aaKnown RBP11.62□□□□□ -0.55
USP11-211ENST00000489111 L3MBTL3Q96JM7 780 aaPredicted RBP11.62□□□□□ -0.55
USP11-211ENST00000489111 NYAP2Q9P242 653 aa11.62□□□□□ -0.55
USP11-211ENST00000489111 RBM27Q9P2N5 1060 aaKnown RBP11.62□□□□□ -0.55
USP11-211ENST00000489111 ISY1Q9ULR0 285 aaKnown RBP11.62□□□□□ -0.55
USP11-211ENST00000489111 SCAF8Q9UPN6 1271 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms