RNA–Protein interactions for RNA: ENST00000489081.5

CMSS1-205, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 2 BASIC

Gene CMSS1, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-205ENST00000489081 RRP1BQ14684 758 aaKnown RBP13.47□□□□□ -0.25
CMSS1-205ENST00000489081 CERKLQ49MI3 558 aaPredicted RBP13.47□□□□□ -0.25
CMSS1-205ENST00000489081 POTEHQ6S545 545 aa13.47□□□□□ -0.25
CMSS1-205ENST00000489081 SYNE3Q6ZMZ3 975 aa13.47□□□□□ -0.25
CMSS1-205ENST00000489081 RAB11FIP4Q86YS3 637 aa13.47□□□□□ -0.25
CMSS1-205ENST00000489081 ZNF654Q8IZM8 581 aa13.47□□□□□ -0.25
CMSS1-205ENST00000489081 CEP95Q96GE4 821 aa13.47□□□□□ -0.25
CMSS1-205ENST00000489081 TAF1DQ9H5J8 278 aaPredicted RBP13.47□□□□□ -0.25
CMSS1-205ENST00000489081 CWC22Q9HCG8 908 aaKnown RBP13.47□□□□□ -0.25
CMSS1-205ENST00000489081 PPP2R3BQ9Y5P8 575 aa13.47□□□□□ -0.25
CMSS1-205ENST00000489081 NID2Q14112 1375 aa13.46□□□□□ -0.25
CMSS1-205ENST00000489081 IQCA1LA6NCM1 817 aa13.46□□□□□ -0.25
CMSS1-205ENST00000489081 DDAH1O94760 285 aa13.46□□□□□ -0.25
CMSS1-205ENST00000489081 MICU3Q86XE3 530 aa13.46□□□□□ -0.25
CMSS1-205ENST00000489081 MYL10Q9BUA6 226 aa13.46□□□□□ -0.25
CMSS1-205ENST00000489081 NCOA5Q9HCD5 579 aaKnown RBP13.46□□□□□ -0.25
CMSS1-205ENST00000489081 MTMR4Q9NYA4 1195 aa13.46□□□□□ -0.25
CMSS1-205ENST00000489081 GOLGA8AA7E2F4 631 aa13.45□□□□□ -0.26
CMSS1-205ENST00000489081 MPHOSPH10O00566 681 aaKnown RBP13.45□□□□□ -0.26
CMSS1-205ENST00000489081 CTDNEP1O95476 244 aa13.45□□□□□ -0.26
CMSS1-205ENST00000489081 RXRAP19793 462 aa13.45□□□□□ -0.26
CMSS1-205ENST00000489081 VASPP50552 380 aaPredicted RBP13.45□□□□□ -0.26
CMSS1-205ENST00000489081 METAP2P50579 478 aaKnown RBP eCLIP13.45□□□□□ -0.26
CMSS1-205ENST00000489081 JAG1P78504 1218 aa13.45□□□□□ -0.26
CMSS1-205ENST00000489081 TROAPQ12815 778 aa13.45□□□□□ -0.26
CMSS1-205ENST00000489081 ABCB5Q2M3G0 1257 aa13.45□□□□□ -0.26
CMSS1-205ENST00000489081 SHROOM1Q2M3G4 852 aaPredicted RBP13.45□□□□□ -0.26
CMSS1-205ENST00000489081 NBPF12Q5TAG4 269 aaPredicted RBP13.45□□□□□ -0.26
CMSS1-205ENST00000489081 TMEM179Q6ZVK1 233 aa13.45□□□□□ -0.26
CMSS1-205ENST00000489081 MIGA2Q7L4E1 593 aa13.45□□□□□ -0.26
CMSS1-205ENST00000489081 CATIPQ7Z7H3 387 aa13.45□□□□□ -0.26
CMSS1-205ENST00000489081 ZC3H15Q8WU90 426 aaKnown RBP13.45□□□□□ -0.26
CMSS1-205ENST00000489081 DCPSQ96C86 337 aaKnown RBP13.45□□□□□ -0.26
CMSS1-205ENST00000489081 CHMP4CQ96CF2 233 aa13.45□□□□□ -0.26
CMSS1-205ENST00000489081 LLPHQ9BRT6 129 aaKnown RBP13.45□□□□□ -0.26
CMSS1-205ENST00000489081 KAT14Q9H8E8 782 aa13.45□□□□□ -0.26
CMSS1-205ENST00000489081 FAM217BQ9NTX9 383 aaPredicted RBP13.45□□□□□ -0.26
CMSS1-205ENST00000489081 SMC3Q9UQE7 1217 aa13.45□□□□□ -0.26
CMSS1-205ENST00000489081 DHX16O60231 1041 aaKnown RBP13.44□□□□□ -0.26
CMSS1-205ENST00000489081 GDF11O95390 407 aa13.44□□□□□ -0.26
CMSS1-205ENST00000489081 TOP1P11387 765 aaKnown RBP13.44□□□□□ -0.26
CMSS1-205ENST00000489081 CDC27P30260 824 aa13.44□□□□□ -0.26
CMSS1-205ENST00000489081 GUCY1A2P33402 732 aa13.44□□□□□ -0.26
CMSS1-205ENST00000489081 PPP4R3BQ5MIZ7 849 aa13.44□□□□□ -0.26
CMSS1-205ENST00000489081 CLEC10AQ8IUN9 316 aa13.44□□□□□ -0.26
CMSS1-205ENST00000489081 PNMA1Q8ND90 353 aa13.44□□□□□ -0.26
CMSS1-205ENST00000489081 NSUN7Q8NE18 718 aaKnown RBP13.44□□□□□ -0.26
CMSS1-205ENST00000489081 SMARCC2Q8TAQ2 1214 aa13.44□□□□□ -0.26
CMSS1-205ENST00000489081 NUP133Q8WUM0 1156 aa13.44□□□□□ -0.26
CMSS1-205ENST00000489081 HOOK2Q96ED9 719 aa13.44□□□□□ -0.26
CMSS1-205ENST00000489081 TMEM47Q9BQJ4 181 aa13.44□□□□□ -0.26
CMSS1-205ENST00000489081 STX8Q9UNK0 236 aa13.44□□□□□ -0.26
CMSS1-205ENST00000489081 WDR90Q96KV7 1748 aa13.44□□□□□ -0.26
CMSS1-205ENST00000489081 PHF20L1A8MW92 1017 aa13.43□□□□□ -0.26
CMSS1-205ENST00000489081 JAK2O60674 1132 aa13.43□□□□□ -0.26
CMSS1-205ENST00000489081 DTNBO60941 627 aa13.43□□□□□ -0.26
CMSS1-205ENST00000489081 TTLL1O95922 423 aa13.43□□□□□ -0.26
CMSS1-205ENST00000489081 GH2P01242 217 aa13.43□□□□□ -0.26
CMSS1-205ENST00000489081 CALM1P0DP23 149 aa13.43□□□□□ -0.26
CMSS1-205ENST00000489081 CALM2P0DP24 149 aa13.43□□□□□ -0.26
CMSS1-205ENST00000489081 CALM3P0DP25 149 aa13.43□□□□□ -0.26
CMSS1-205ENST00000489081 ADD1P35611 737 aaKnown RBP13.43□□□□□ -0.26
CMSS1-205ENST00000489081 CAP2P40123 477 aa13.43□□□□□ -0.26
CMSS1-205ENST00000489081 SEPT2Q15019 361 aa13.43□□□□□ -0.26
CMSS1-205ENST00000489081 PPP2R5BQ15173 497 aa13.43□□□□□ -0.26
CMSS1-205ENST00000489081 RTN1Q16799 776 aa13.43□□□□□ -0.26
CMSS1-205ENST00000489081 PRAMEF18Q5VWM3 479 aa13.43□□□□□ -0.26
CMSS1-205ENST00000489081 PNMA8AQ86V59 439 aaPredicted RBP13.43□□□□□ -0.26
CMSS1-205ENST00000489081 SULF1Q8IWU6 871 aa13.43□□□□□ -0.26
CMSS1-205ENST00000489081 CCDC144CPQ8IYA2 1237 aa13.43□□□□□ -0.26
CMSS1-205ENST00000489081 FANCBQ8NB91 859 aa13.43□□□□□ -0.26
CMSS1-205ENST00000489081 MAP3K14Q99558 947 aa13.43□□□□□ -0.26
CMSS1-205ENST00000489081 KANSL2Q9H9L4 492 aa13.43□□□□□ -0.26
CMSS1-205ENST00000489081 CABP5Q9NP86 173 aa13.43□□□□□ -0.26
CMSS1-205ENST00000489081 CIZ1Q9ULV3 898 aaPredicted RBP13.43□□□□□ -0.26
CMSS1-205ENST00000489081 CCDC196A0A1B0GTZ2 297 aa13.42□□□□□ -0.26
CMSS1-205ENST00000489081 PTPDC1A2A3K4 754 aa13.42□□□□□ -0.26
CMSS1-205ENST00000489081 ADM5C9JUS6 153 aa13.42□□□□□ -0.26
CMSS1-205ENST00000489081 CPLX1O14810 134 aa13.42□□□□□ -0.26
CMSS1-205ENST00000489081 GJB2P29033 226 aa13.42□□□□□ -0.26
CMSS1-205ENST00000489081 NTRK3Q16288 839 aa13.42□□□□□ -0.26
CMSS1-205ENST00000489081 EAPPQ56P03 285 aaPredicted RBP13.42□□□□□ -0.26
CMSS1-205ENST00000489081 DCAF15Q66K64 600 aa13.42□□□□□ -0.26
CMSS1-205ENST00000489081 KRT26Q7Z3Y9 468 aa13.42□□□□□ -0.26
CMSS1-205ENST00000489081 SIAH1Q8IUQ4 282 aa13.42□□□□□ -0.26
CMSS1-205ENST00000489081 ZNF341Q9BYN7 854 aa13.42□□□□□ -0.26
CMSS1-205ENST00000489081 CHMP5Q9NZZ3 219 aa13.42□□□□□ -0.26
CMSS1-205ENST00000489081 NYAP2Q9P242 653 aa13.42□□□□□ -0.26
CMSS1-205ENST00000489081 CLIP2Q9UDT6 1046 aa13.42□□□□□ -0.26
CMSS1-205ENST00000489081 ZBTB21Q9ULJ3 1066 aa13.42□□□□□ -0.26
CMSS1-205ENST00000489081 GREB1LQ9C091 1923 aaPredicted RBP13.42□□□□□ -0.26
CMSS1-205ENST00000489081 SSC5DA1L4H1 1573 aa13.41□□□□□ -0.26
CMSS1-205ENST00000489081 SCN4AP35499 1836 aa13.41□□□□□ -0.26
CMSS1-205ENST00000489081 EEF2P13639 858 aaKnown RBP13.41□□□□□ -0.26
CMSS1-205ENST00000489081 HMGN5P82970 282 aaKnown RBP13.41□□□□□ -0.26
CMSS1-205ENST00000489081 ICA1Q05084 483 aa13.41□□□□□ -0.26
CMSS1-205ENST00000489081 SUPT20HL1Q3ZLR7 823 aa13.41□□□□□ -0.26
CMSS1-205ENST00000489081 CPLX2Q6PUV4 134 aaKnown RBP13.41□□□□□ -0.26
CMSS1-205ENST00000489081 LRRC47Q8N1G4 583 aaKnown RBP13.41□□□□□ -0.26
CMSS1-205ENST00000489081 MKL1Q969V6 931 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 180.3 ms