RNA–Protein interactions for RNA: ENST00000488848.1

USP11-209, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 904 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-209ENST00000488848 CERKLQ49MI3 558 aaPredicted RBP12.52□□□□□ -0.41
USP11-209ENST00000488848 FAM47AQ5JRC9 791 aa12.52□□□□□ -0.41
USP11-209ENST00000488848 CRACR2BQ8N4Y2 399 aaPredicted RBP12.52□□□□□ -0.41
USP11-209ENST00000488848 NSUN7Q8NE18 718 aaKnown RBP12.52□□□□□ -0.41
USP11-209ENST00000488848 CEP95Q96GE4 821 aa12.52□□□□□ -0.41
USP11-209ENST00000488848 SLKQ9H2G2 1235 aaPredicted RBP12.52□□□□□ -0.41
USP11-209ENST00000488848 KANSL2Q9H9L4 492 aa12.52□□□□□ -0.41
USP11-209ENST00000488848 SENP2Q9HC62 589 aa12.52□□□□□ -0.41
USP11-209ENST00000488848 TOMM22Q9NS69 142 aa12.52□□□□□ -0.41
USP11-209ENST00000488848 RBM28Q9NW13 759 aaKnown RBP12.52□□□□□ -0.41
USP11-209ENST00000488848 ASTN2O75129 1339 aaPredicted RBP12.52□□□□□ -0.41
USP11-209ENST00000488848 CCDC69A6NI79 296 aa12.51□□□□□ -0.41
USP11-209ENST00000488848 UNCXA6NJT0 531 aa12.51□□□□□ -0.41
USP11-209ENST00000488848 CTDNEP1O95476 244 aa12.51□□□□□ -0.41
USP11-209ENST00000488848 TTLL1O95922 423 aa12.51□□□□□ -0.41
USP11-209ENST00000488848 IFNAR1P17181 557 aa12.51□□□□□ -0.41
USP11-209ENST00000488848 GUCY1A2P33402 732 aa12.51□□□□□ -0.41
USP11-209ENST00000488848 METAP2P50579 478 aaKnown RBP eCLIP12.51□□□□□ -0.41
USP11-209ENST00000488848 FUT2Q10981 343 aa12.51□□□□□ -0.41
USP11-209ENST00000488848 DCAF15Q66K64 600 aa12.51□□□□□ -0.41
USP11-209ENST00000488848 CATIPQ7Z7H3 387 aa12.51□□□□□ -0.41
USP11-209ENST00000488848 ZSCAN29Q8IWY8 852 aaPredicted RBP12.51□□□□□ -0.41
USP11-209ENST00000488848 CDAN1Q8IWY9 1227 aa12.51□□□□□ -0.41
USP11-209ENST00000488848 FAM177A1Q8N128 213 aaPredicted RBP12.51□□□□□ -0.41
USP11-209ENST00000488848 TMEM47Q9BQJ4 181 aa12.51□□□□□ -0.41
USP11-209ENST00000488848 NMT2O60551 498 aa12.5□□□□□ -0.41
USP11-209ENST00000488848 CTNND1O60716 968 aaKnown RBP12.5□□□□□ -0.41
USP11-209ENST00000488848 CDKL5O76039 1030 aa12.5□□□□□ -0.41
USP11-209ENST00000488848 ASNSP08243 561 aa12.5□□□□□ -0.41
USP11-209ENST00000488848 CAP2P40123 477 aa12.5□□□□□ -0.41
USP11-209ENST00000488848 GRM4Q14833 912 aa12.5□□□□□ -0.41
USP11-209ENST00000488848 ABCB5Q2M3G0 1257 aa12.5□□□□□ -0.41
USP11-209ENST00000488848 SUPT20HL1Q3ZLR7 823 aa12.5□□□□□ -0.41
USP11-209ENST00000488848 NOL9Q5SY16 702 aaKnown RBP12.5□□□□□ -0.41
USP11-209ENST00000488848 SYNE3Q6ZMZ3 975 aa12.5□□□□□ -0.41
USP11-209ENST00000488848 FANCBQ8NB91 859 aa12.5□□□□□ -0.41
USP11-209ENST00000488848 PNMA1Q8ND90 353 aa12.5□□□□□ -0.41
USP11-209ENST00000488848 GMCL1P1Q8NEA9 526 aa12.5□□□□□ -0.41
USP11-209ENST00000488848 TRIM34Q9BYJ4 488 aa12.5□□□□□ -0.41
USP11-209ENST00000488848 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.5□□□□□ -0.41
USP11-209ENST00000488848 PHIPQ8WWQ0 1821 aa12.5□□□□□ -0.41
USP11-209ENST00000488848 OTOFQ9HC10 1997 aa12.5□□□□□ -0.41
USP11-209ENST00000488848 PDCP20941 246 aa12.49□□□□□ -0.41
USP11-209ENST00000488848 SLC4A3P48751 1232 aa12.49□□□□□ -0.41
USP11-209ENST00000488848 RRP1BQ14684 758 aaKnown RBP12.49□□□□□ -0.41
USP11-209ENST00000488848 MAP3K11Q16584 847 aa12.49□□□□□ -0.41
USP11-209ENST00000488848 SLC4A8Q2Y0W8 1093 aa12.49□□□□□ -0.41
USP11-209ENST00000488848 RBM26Q5T8P6 1007 aaKnown RBP12.49□□□□□ -0.41
USP11-209ENST00000488848 CPLX2Q6PUV4 134 aaKnown RBP12.49□□□□□ -0.41
USP11-209ENST00000488848 TMTC3Q6ZXV5 915 aa12.49□□□□□ -0.41
USP11-209ENST00000488848 SIAH1Q8IUQ4 282 aa12.49□□□□□ -0.41
USP11-209ENST00000488848 CCDC83Q8IWF9 413 aa12.49□□□□□ -0.41
USP11-209ENST00000488848 LZTS2Q9BRK4 669 aa12.49□□□□□ -0.41
USP11-209ENST00000488848 ZKSCAN3Q9BRR0 538 aa12.49□□□□□ -0.41
USP11-209ENST00000488848 KAT14Q9H8E8 782 aa12.49□□□□□ -0.41
USP11-209ENST00000488848 CHMP5Q9NZZ3 219 aa12.49□□□□□ -0.41
USP11-209ENST00000488848 ZBTB21Q9ULJ3 1066 aa12.49□□□□□ -0.41
USP11-209ENST00000488848 KIF3AQ9Y496 699 aa12.49□□□□□ -0.41
USP11-209ENST00000488848 PALM3A6NDB9 673 aaPredicted RBP12.48□□□□□ -0.41
USP11-209ENST00000488848 GOLGA8AA7E2F4 631 aa12.48□□□□□ -0.41
USP11-209ENST00000488848 HSP90AA1P07900 732 aaKnown RBP12.48□□□□□ -0.41
USP11-209ENST00000488848 CDC27P30260 824 aa12.48□□□□□ -0.41
USP11-209ENST00000488848 KIF5BP33176 963 aa12.48□□□□□ -0.41
USP11-209ENST00000488848 GNAQP50148 359 aa12.48□□□□□ -0.41
USP11-209ENST00000488848 NUCB2P80303 420 aa12.48□□□□□ -0.41
USP11-209ENST00000488848 RTN1Q16799 776 aa12.48□□□□□ -0.41
USP11-209ENST00000488848 NFXL1Q6ZNB6 911 aa12.48□□□□□ -0.41
USP11-209ENST00000488848 CLEC17AQ6ZS10 378 aa12.48□□□□□ -0.41
USP11-209ENST00000488848 NBPF11Q86T75 865 aa12.48□□□□□ -0.41
USP11-209ENST00000488848 MICU3Q86XE3 530 aa12.48□□□□□ -0.41
USP11-209ENST00000488848 NECAB1Q8N987 351 aa12.48□□□□□ -0.41
USP11-209ENST00000488848 DCPSQ96C86 337 aaKnown RBP12.48□□□□□ -0.41
USP11-209ENST00000488848 GMCL1Q96IK5 515 aa12.48□□□□□ -0.41
USP11-209ENST00000488848 RNF26Q9BY78 433 aaPredicted RBP12.48□□□□□ -0.41
USP11-209ENST00000488848 ZNF341Q9BYN7 854 aa12.48□□□□□ -0.41
USP11-209ENST00000488848 CABP5Q9NP86 173 aa12.48□□□□□ -0.41
USP11-209ENST00000488848 RBM27Q9P2N5 1060 aaKnown RBP12.48□□□□□ -0.41
USP11-209ENST00000488848 SMC3Q9UQE7 1217 aa12.48□□□□□ -0.41
USP11-209ENST00000488848 PTPDC1A2A3K4 754 aa12.47□□□□□ -0.41
USP11-209ENST00000488848 DCAF8L1A6NGE4 600 aa12.47□□□□□ -0.41
USP11-209ENST00000488848 BRD1O95696 1058 aa12.47□□□□□ -0.41
USP11-209ENST00000488848 GH2P01242 217 aa12.47□□□□□ -0.41
USP11-209ENST00000488848 VEGFAP15692 232 aaPredicted RBP12.47□□□□□ -0.41
USP11-209ENST00000488848 JAG1P78504 1218 aa12.47□□□□□ -0.41
USP11-209ENST00000488848 ICA1Q05084 483 aa12.47□□□□□ -0.41
USP11-209ENST00000488848 ASPRV1Q53RT3 343 aa12.47□□□□□ -0.41
USP11-209ENST00000488848 NBPF12Q5TAG4 269 aaPredicted RBP12.47□□□□□ -0.41
USP11-209ENST00000488848 NOL8Q76FK4 1167 aaKnown RBP12.47□□□□□ -0.41
USP11-209ENST00000488848 SULF1Q8IWU6 871 aa12.47□□□□□ -0.41
USP11-209ENST00000488848 STK11IPQ8N1F8 1099 aa12.47□□□□□ -0.41
USP11-209ENST00000488848 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.47□□□□□ -0.41
USP11-209ENST00000488848 KLRG1Q96E93 195 aa12.47□□□□□ -0.41
USP11-209ENST00000488848 LARP6Q9BRS8 491 aaKnown RBP12.47□□□□□ -0.41
USP11-209ENST00000488848 WDR18Q9BV38 432 aa12.47□□□□□ -0.41
USP11-209ENST00000488848 SPZ1Q9BXG8 430 aa12.47□□□□□ -0.41
USP11-209ENST00000488848 MAD2L2Q9UI95 211 aa12.47□□□□□ -0.41
USP11-209ENST00000488848 STX8Q9UNK0 236 aa12.47□□□□□ -0.41
USP11-209ENST00000488848 TMX2Q9Y320 296 aa12.47□□□□□ -0.41
USP11-209ENST00000488848 MYH6P13533 1939 aa12.47□□□□□ -0.41
USP11-209ENST00000488848 CNTNAP5Q8WYK1 1306 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms