RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 PNMA3Q9UL41 463 aa19.09■□□□□ 0.65
CTDSP1-209ENST00000488627 MINDY4BA8MYZ0 360 aa19.08■□□□□ 0.64
CTDSP1-209ENST00000488627 TRIM6-TRIM34B2RNG4 842 aa19.08■□□□□ 0.64
CTDSP1-209ENST00000488627 MPHOSPH10O00566 681 aaKnown RBP19.08■□□□□ 0.64
CTDSP1-209ENST00000488627 APPP05067 770 aa19.08■□□□□ 0.64
CTDSP1-209ENST00000488627 OSBPP22059 807 aa19.08■□□□□ 0.64
CTDSP1-209ENST00000488627 PSMC4P43686 418 aa19.08■□□□□ 0.64
CTDSP1-209ENST00000488627 KIF22Q14807 665 aa19.08■□□□□ 0.64
CTDSP1-209ENST00000488627 ARHGEF6Q15052 776 aa19.08■□□□□ 0.64
CTDSP1-209ENST00000488627 POTEEQ6S8J3 1075 aa19.08■□□□□ 0.64
CTDSP1-209ENST00000488627 P2RX7Q99572 595 aaKnown RBP19.08■□□□□ 0.64
CTDSP1-209ENST00000488627 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.08■□□□□ 0.64
CTDSP1-209ENST00000488627 HTTP42858 3142 aa19.08■□□□□ 0.64
CTDSP1-209ENST00000488627 PTPRFP10586 1907 aa19.08■□□□□ 0.64
CTDSP1-209ENST00000488627 NAV1Q8NEY1 1877 aa19.07■□□□□ 0.64
CTDSP1-209ENST00000488627 ROBO3Q96MS0 1386 aa19.07■□□□□ 0.64
CTDSP1-209ENST00000488627 A0A0D9SFI3 127 aa19.07■□□□□ 0.64
CTDSP1-209ENST00000488627 GNRH1P01148 92 aa19.07■□□□□ 0.64
CTDSP1-209ENST00000488627 TDO2P48775 406 aa19.07■□□□□ 0.64
CTDSP1-209ENST00000488627 USP14P54578 494 aa19.07■□□□□ 0.64
CTDSP1-209ENST00000488627 VPS53Q5VIR6 699 aa19.07■□□□□ 0.64
CTDSP1-209ENST00000488627 RILPL2Q969X0 211 aa19.07■□□□□ 0.64
CTDSP1-209ENST00000488627 MYH7P12883 1935 aa19.07■□□□□ 0.64
CTDSP1-209ENST00000488627 ECM2O94769 699 aaPredicted RBP19.06■□□□□ 0.64
CTDSP1-209ENST00000488627 SDSP20132 328 aa19.06■□□□□ 0.64
CTDSP1-209ENST00000488627 RASA1P20936 1047 aa19.06■□□□□ 0.64
CTDSP1-209ENST00000488627 GCLCP48506 637 aaPredicted RBP19.06■□□□□ 0.64
CTDSP1-209ENST00000488627 ZYXQ15942 572 aaKnown RBP19.06■□□□□ 0.64
CTDSP1-209ENST00000488627 FAM110CQ1W6H9 321 aa19.06■□□□□ 0.64
CTDSP1-209ENST00000488627 MCMDC2Q4G0Z9 681 aa19.06■□□□□ 0.64
CTDSP1-209ENST00000488627 CLEC10AQ8IUN9 316 aa19.06■□□□□ 0.64
CTDSP1-209ENST00000488627 ANKRD13CQ8N6S4 541 aa19.06■□□□□ 0.64
CTDSP1-209ENST00000488627 FEZ1Q99689 392 aa19.06■□□□□ 0.64
CTDSP1-209ENST00000488627 NACAP1Q9BZK3 213 aa19.06■□□□□ 0.64
CTDSP1-209ENST00000488627 ATAD5Q96QE3 1844 aa19.05■□□□□ 0.64
CTDSP1-209ENST00000488627 VCAM1P19320 739 aa19.05■□□□□ 0.64
CTDSP1-209ENST00000488627 NMIQ13287 307 aaPredicted RBP19.05■□□□□ 0.64
CTDSP1-209ENST00000488627 KIAA1755Q5JYT7 1200 aa19.05■□□□□ 0.64
CTDSP1-209ENST00000488627 STK11IPQ8N1F8 1099 aa19.05■□□□□ 0.64
CTDSP1-209ENST00000488627 PTCH2Q9Y6C5 1203 aa19.05■□□□□ 0.64
CTDSP1-209ENST00000488627 FMNL1O95466 1100 aaPredicted RBP19.04■□□□□ 0.64
CTDSP1-209ENST00000488627 HERVK_113P62684 666 aa19.04■□□□□ 0.64
CTDSP1-209ENST00000488627 IRX3P78415 501 aaPredicted RBP19.04■□□□□ 0.64
CTDSP1-209ENST00000488627 ALX1Q15699 326 aa19.04■□□□□ 0.64
CTDSP1-209ENST00000488627 CATSPERGQ6ZRH7 1159 aa19.04■□□□□ 0.64
CTDSP1-209ENST00000488627 ZNF589Q86UQ0 364 aaPredicted RBP19.04■□□□□ 0.64
CTDSP1-209ENST00000488627 NAPBQ9H115 298 aa19.04■□□□□ 0.64
CTDSP1-209ENST00000488627 KANSL2Q9H9L4 492 aa19.04■□□□□ 0.64
CTDSP1-209ENST00000488627 TXNRD2Q9NNW7 524 aa19.04■□□□□ 0.64
CTDSP1-209ENST00000488627 MORF4L1Q9UBU8 362 aa19.04■□□□□ 0.64
CTDSP1-209ENST00000488627 SRRDQ9UH36 339 aa19.04■□□□□ 0.64
CTDSP1-209ENST00000488627 TMX2Q9Y320 296 aa19.04■□□□□ 0.64
CTDSP1-209ENST00000488627 BAZ2AQ9UIF9 1905 aaKnown RBP19.04■□□□□ 0.64
CTDSP1-209ENST00000488627 LOC285556D6RIA3 1793 aa19.04■□□□□ 0.64
CTDSP1-209ENST00000488627 USP17L15C9J2P7 530 aa19.03■□□□□ 0.64
CTDSP1-209ENST00000488627 USP17L13C9JLJ4 530 aa19.03■□□□□ 0.64
CTDSP1-209ENST00000488627 USP17L11C9JVI0 530 aa19.03■□□□□ 0.64
CTDSP1-209ENST00000488627 USP17L18D6R9N7 530 aa19.03■□□□□ 0.64
CTDSP1-209ENST00000488627 USP17L22D6RA61 530 aa19.03■□□□□ 0.64
CTDSP1-209ENST00000488627 USP17L17D6RBQ6 530 aa19.03■□□□□ 0.64
CTDSP1-209ENST00000488627 USP17L19D6RCP7 530 aa19.03■□□□□ 0.64
CTDSP1-209ENST00000488627 USP17L20D6RJB6 530 aa19.03■□□□□ 0.64
CTDSP1-209ENST00000488627 PEX10O60683 326 aa19.03■□□□□ 0.64
CTDSP1-209ENST00000488627 PRMT2P55345 433 aa19.03■□□□□ 0.64
CTDSP1-209ENST00000488627 FCGRTP55899 365 aa19.03■□□□□ 0.64
CTDSP1-209ENST00000488627 ICA1Q05084 483 aa19.03■□□□□ 0.64
CTDSP1-209ENST00000488627 PPARAQ07869 468 aa19.03■□□□□ 0.64
CTDSP1-209ENST00000488627 USP17L24Q0WX57 530 aa19.03■□□□□ 0.64
CTDSP1-209ENST00000488627 ARMC5Q96C12 935 aa19.03■□□□□ 0.64
CTDSP1-209ENST00000488627 MKNK2Q9HBH9 465 aa19.03■□□□□ 0.64
CTDSP1-209ENST00000488627 RBPJLQ9UBG7 517 aa19.03■□□□□ 0.64
CTDSP1-209ENST00000488627 EEF2P13639 858 aaKnown RBP19.02■□□□□ 0.64
CTDSP1-209ENST00000488627 GSPT1P15170 499 aaKnown RBP19.02■□□□□ 0.64
CTDSP1-209ENST00000488627 HOXD10P28358 340 aa19.02■□□□□ 0.64
CTDSP1-209ENST00000488627 RGS19P49795 217 aa19.02■□□□□ 0.64
CTDSP1-209ENST00000488627 TACC3Q9Y6A5 838 aa19.02■□□□□ 0.64
CTDSP1-209ENST00000488627 IGKV6D-41A0A0C4DH26 115 aa19.01■□□□□ 0.63
CTDSP1-209ENST00000488627 PRDM1O75626 825 aa19.01■□□□□ 0.63
CTDSP1-209ENST00000488627 FGAP02671 866 aa19.01■□□□□ 0.63
CTDSP1-209ENST00000488627 HSPD1P10809 573 aaKnown RBP19.01■□□□□ 0.63
CTDSP1-209ENST00000488627 PRKCZQ05513 592 aa19.01■□□□□ 0.63
CTDSP1-209ENST00000488627 Q3C1V9 767 aa19.01■□□□□ 0.63
CTDSP1-209ENST00000488627 TTC22Q5TAA0 569 aa19.01■□□□□ 0.63
CTDSP1-209ENST00000488627 RPAP3Q9H6T3 665 aaPredicted RBP19.01■□□□□ 0.63
CTDSP1-209ENST00000488627 ARHGEF10LQ9HCE6 1279 aa19.01■□□□□ 0.63
CTDSP1-209ENST00000488627 GABRQQ9UN88 632 aa19.01■□□□□ 0.63
CTDSP1-209ENST00000488627 LBX2Q6XYB7 198 aa19■□□□□ 0.63
CTDSP1-209ENST00000488627 ZNF444Q8N0Y2 327 aaPredicted RBP19■□□□□ 0.63
CTDSP1-209ENST00000488627 VCPKMTQ9H867 229 aa19■□□□□ 0.63
CTDSP1-209ENST00000488627 ZNF287Q9HBT7 754 aa19■□□□□ 0.63
CTDSP1-209ENST00000488627 INCENPQ9NQS7 918 aa19■□□□□ 0.63
CTDSP1-209ENST00000488627 ANAPC4Q9UJX5 808 aa19■□□□□ 0.63
CTDSP1-209ENST00000488627 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19■□□□□ 0.63
CTDSP1-209ENST00000488627 CCDC171Q6TFL3 1326 aa19■□□□□ 0.63
CTDSP1-209ENST00000488627 CNMDO75829 334 aa18.99■□□□□ 0.63
CTDSP1-209ENST00000488627 FGRP09769 529 aa18.99■□□□□ 0.63
CTDSP1-209ENST00000488627 SOX10P56693 466 aa18.99■□□□□ 0.63
CTDSP1-209ENST00000488627 GPRC5AQ8NFJ5 357 aa18.99■□□□□ 0.63
CTDSP1-209ENST00000488627 GTF3C2Q8WUA4 911 aaPredicted RBP18.99■□□□□ 0.63
CTDSP1-209ENST00000488627 LPAR1Q92633 364 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms