RNA–Protein interactions for RNA: ENST00000488571.1

SNU13-208, Transcript of small nuclear ribonucleoprotein 13, human

TSL 5

Gene SNU13, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNU13-208	ENST00000488571	C19orf81	C9J6K1	198 aa		13.93	□□□□□ -0.18
SNU13-208	ENST00000488571	USP17L10	C9JJH3	530 aa		13.93	□□□□□ -0.18
SNU13-208	ENST00000488571	BCAR3	O75815	825 aa		13.93	□□□□□ -0.18
SNU13-208	ENST00000488571	GDF11	O95390	407 aa		13.93	□□□□□ -0.18
SNU13-208	ENST00000488571	XRCC5	P13010	732 aa	Known RBP	13.93	□□□□□ -0.18
SNU13-208	ENST00000488571		Q3C1V9	767 aa		13.93	□□□□□ -0.18
SNU13-208	ENST00000488571	TTC39A	Q5SRH9	613 aa		13.93	□□□□□ -0.18
SNU13-208	ENST00000488571	FOXP4	Q8IVH2	680 aa	Predicted RBP	13.93	□□□□□ -0.18
SNU13-208	ENST00000488571	GPRC5A	Q8NFJ5	357 aa		13.93	□□□□□ -0.18
SNU13-208	ENST00000488571	CLUAP1	Q96AJ1	413 aa		13.93	□□□□□ -0.18
SNU13-208	ENST00000488571	NUDT12	Q9BQG2	462 aa		13.93	□□□□□ -0.18
SNU13-208	ENST00000488571	NOL10	Q9BSC4	688 aa	Known RBP	13.93	□□□□□ -0.18
SNU13-208	ENST00000488571	PORCN	Q9H237	461 aa		13.93	□□□□□ -0.18
SNU13-208	ENST00000488571	C11orf49	Q9H6J7	331 aa		13.93	□□□□□ -0.18
SNU13-208	ENST00000488571	TMOD4	Q9NZQ9	345 aa		13.93	□□□□□ -0.18
SNU13-208	ENST00000488571	ZBTB21	Q9ULJ3	1066 aa		13.93	□□□□□ -0.18
SNU13-208	ENST00000488571	MYH1	P12882	1939 aa		13.92	□□□□□ -0.18
SNU13-208	ENST00000488571	IPO8	O15397	1037 aa	Known RBP	13.92	□□□□□ -0.18
SNU13-208	ENST00000488571	SYN1	P17600	705 aa		13.92	□□□□□ -0.18
SNU13-208	ENST00000488571	ERVK-9	P63128	1117 aa		13.92	□□□□□ -0.18
SNU13-208	ENST00000488571	ERVK-24	P63145	666 aa		13.92	□□□□□ -0.18
SNU13-208	ENST00000488571	DYNLL1	P63167	89 aa	Known RBP	13.92	□□□□□ -0.18
SNU13-208	ENST00000488571	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	13.92	□□□□□ -0.18
SNU13-208	ENST00000488571	SSH3	Q8TE77	659 aa		13.92	□□□□□ -0.18
SNU13-208	ENST00000488571	SOCS4	Q8WXH5	440 aa		13.92	□□□□□ -0.18
SNU13-208	ENST00000488571	FRAT1	Q92837	279 aa	Predicted RBP	13.92	□□□□□ -0.18
SNU13-208	ENST00000488571	ZNF512B	Q96KM6	892 aa	Predicted RBP	13.92	□□□□□ -0.18
SNU13-208	ENST00000488571	PIH1D3	Q9NQM4	214 aa	Known RBP	13.92	□□□□□ -0.18
SNU13-208	ENST00000488571	EMILIN3	Q9NT22	766 aa		13.92	□□□□□ -0.18
SNU13-208	ENST00000488571	GINM1	Q9NU53	330 aa		13.92	□□□□□ -0.18
SNU13-208	ENST00000488571	FRMPD3	Q5JV73	1810 aa		13.92	□□□□□ -0.18
SNU13-208	ENST00000488571	COL6A1	P12109	1028 aa		13.91	□□□□□ -0.18
SNU13-208	ENST00000488571	MAPK4	P31152	587 aa		13.91	□□□□□ -0.18
SNU13-208	ENST00000488571	MAGEA10	P43363	369 aa	Predicted RBP	13.91	□□□□□ -0.18
SNU13-208	ENST00000488571	ZAP70	P43403	619 aa		13.91	□□□□□ -0.18
SNU13-208	ENST00000488571	CACNB2	Q08289	660 aa	Predicted RBP	13.91	□□□□□ -0.18
SNU13-208	ENST00000488571	CCL14	Q16627	93 aa		13.91	□□□□□ -0.18
SNU13-208	ENST00000488571	CCDC158	Q5M9N0	1113 aa		13.91	□□□□□ -0.18
SNU13-208	ENST00000488571	MORN1	Q5T089	497 aa		13.91	□□□□□ -0.18
SNU13-208	ENST00000488571	LCE2D	Q5TA82	110 aa	Predicted RBP	13.91	□□□□□ -0.18
SNU13-208	ENST00000488571	GPR142	Q7Z601	462 aa		13.91	□□□□□ -0.18
SNU13-208	ENST00000488571	TMEM57	Q8N5G2	664 aa		13.91	□□□□□ -0.18
SNU13-208	ENST00000488571	SLC17A8	Q8NDX2	589 aa		13.91	□□□□□ -0.18
SNU13-208	ENST00000488571	TLR7	Q9NYK1	1049 aa	Known RBP	13.91	□□□□□ -0.18
SNU13-208	ENST00000488571	SAP30BP	Q9UHR5	308 aa	Known RBP	13.91	□□□□□ -0.18
SNU13-208	ENST00000488571	CCND3	P30281	292 aa	Predicted RBP	13.9	□□□□□ -0.18
SNU13-208	ENST00000488571	GPR153	Q6NV75	609 aa		13.9	□□□□□ -0.18
SNU13-208	ENST00000488571	PAGR1	Q9BTK6	254 aa		13.9	□□□□□ -0.18
SNU13-208	ENST00000488571	TRIM34	Q9BYJ4	488 aa		13.9	□□□□□ -0.18
SNU13-208	ENST00000488571	DBNL	Q9UJU6	430 aa	Known RBP	13.9	□□□□□ -0.18
SNU13-208	ENST00000488571	IGSF3	O75054	1194 aa		13.89	□□□□□ -0.19
SNU13-208	ENST00000488571	CNMD	O75829	334 aa		13.89	□□□□□ -0.19
SNU13-208	ENST00000488571	GH2	P01242	217 aa		13.89	□□□□□ -0.19
SNU13-208	ENST00000488571	ZKSCAN1	P17029	563 aa	Predicted RBP	13.89	□□□□□ -0.19
SNU13-208	ENST00000488571	ATP8B2	P98198	1209 aa		13.89	□□□□□ -0.19
SNU13-208	ENST00000488571	PDE3A	Q14432	1141 aa		13.89	□□□□□ -0.19
SNU13-208	ENST00000488571	LRIT3	Q3SXY7	679 aa		13.89	□□□□□ -0.19
SNU13-208	ENST00000488571	PLEKHH3	Q7Z736	793 aa		13.89	□□□□□ -0.19
SNU13-208	ENST00000488571	TRMT44	Q8IYL2	757 aa	Known RBP	13.89	□□□□□ -0.19
SNU13-208	ENST00000488571	PDCD7	Q8N8D1	485 aa	Known RBP	13.89	□□□□□ -0.19
SNU13-208	ENST00000488571	C12orf42	Q96LP6	360 aa		13.89	□□□□□ -0.19
SNU13-208	ENST00000488571	DLL1	O00548	723 aa		13.88	□□□□□ -0.19
SNU13-208	ENST00000488571	SURF6	O75683	361 aa	Known RBP	13.88	□□□□□ -0.19
SNU13-208	ENST00000488571	HLA-DOA	P06340	250 aa		13.88	□□□□□ -0.19
SNU13-208	ENST00000488571	CYP7A1	P22680	504 aa		13.88	□□□□□ -0.19
SNU13-208	ENST00000488571	RGS2	P41220	211 aa		13.88	□□□□□ -0.19
SNU13-208	ENST00000488571	OS9	Q13438	667 aa	Predicted RBP	13.88	□□□□□ -0.19
SNU13-208	ENST00000488571	LRRC26	Q2I0M4	334 aa		13.88	□□□□□ -0.19
SNU13-208	ENST00000488571	TATDN1	Q6P1N9	297 aa		13.88	□□□□□ -0.19
SNU13-208	ENST00000488571	USP17L2	Q6R6M4	530 aa		13.88	□□□□□ -0.19
SNU13-208	ENST00000488571	TDH	Q8IZJ6	230 aa		13.88	□□□□□ -0.19
SNU13-208	ENST00000488571	MIGA1	Q8NAN2	632 aa		13.88	□□□□□ -0.19
SNU13-208	ENST00000488571	GTF3C2	Q8WUA4	911 aa	Predicted RBP	13.88	□□□□□ -0.19
SNU13-208	ENST00000488571	APBA2	Q99767	749 aa		13.88	□□□□□ -0.19
SNU13-208	ENST00000488571	C1orf115	Q9H7X2	142 aa		13.88	□□□□□ -0.19
SNU13-208	ENST00000488571	NOP58	Q9Y2X3	529 aa	Known RBP	13.88	□□□□□ -0.19
SNU13-208	ENST00000488571	CCER2	I3L3R5	266 aa		13.87	□□□□□ -0.19
SNU13-208	ENST00000488571	ZYX	Q15942	572 aa	Known RBP	13.87	□□□□□ -0.19
SNU13-208	ENST00000488571		Q7L0L9	218 aa		13.87	□□□□□ -0.19
SNU13-208	ENST00000488571	DEFB123	Q8N688	67 aa		13.87	□□□□□ -0.19
SNU13-208	ENST00000488571	EAF2	Q96CJ1	260 aa	Predicted RBP	13.87	□□□□□ -0.19
SNU13-208	ENST00000488571	CCDC8	Q9H0W5	538 aa	Predicted RBP	13.87	□□□□□ -0.19
SNU13-208	ENST00000488571	FLRT1	Q9NZU1	646 aa		13.87	□□□□□ -0.19
SNU13-208	ENST00000488571	RABGAP1	Q9Y3P9	1069 aa		13.87	□□□□□ -0.19
SNU13-208	ENST00000488571	NDUFB9	Q9Y6M9	179 aa		13.87	□□□□□ -0.19
SNU13-208	ENST00000488571	USP17L15	C9J2P7	530 aa		13.86	□□□□□ -0.19
SNU13-208	ENST00000488571	USP17L13	C9JLJ4	530 aa		13.86	□□□□□ -0.19
SNU13-208	ENST00000488571	USP17L11	C9JVI0	530 aa		13.86	□□□□□ -0.19
SNU13-208	ENST00000488571	USP17L18	D6R9N7	530 aa		13.86	□□□□□ -0.19
SNU13-208	ENST00000488571	USP17L22	D6RA61	530 aa		13.86	□□□□□ -0.19
SNU13-208	ENST00000488571	USP17L17	D6RBQ6	530 aa		13.86	□□□□□ -0.19
SNU13-208	ENST00000488571	USP17L19	D6RCP7	530 aa		13.86	□□□□□ -0.19
SNU13-208	ENST00000488571	USP17L20	D6RJB6	530 aa		13.86	□□□□□ -0.19
SNU13-208	ENST00000488571	IDH1	O75874	414 aa	Known RBP	13.86	□□□□□ -0.19
SNU13-208	ENST00000488571	USP17L24	Q0WX57	530 aa		13.86	□□□□□ -0.19
SNU13-208	ENST00000488571	MAP2K5	Q13163	448 aa		13.86	□□□□□ -0.19
SNU13-208	ENST00000488571	ZKSCAN2	Q63HK3	967 aa		13.86	□□□□□ -0.19
SNU13-208	ENST00000488571	CATSPERG	Q6ZRH7	1159 aa		13.86	□□□□□ -0.19
SNU13-208	ENST00000488571	CCAR1	Q8IX12	1150 aa	Known RBP	13.86	□□□□□ -0.19
SNU13-208	ENST00000488571	UBE2O	Q9C0C9	1292 aa	Known RBP	13.86	□□□□□ -0.19

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