RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 PAK2Q13177 524 aa6.99□□□□□ -1.29
ITGB1-214ENST00000488427 NKG7Q16617 165 aa6.99□□□□□ -1.29
ITGB1-214ENST00000488427 GK5Q6ZS86 529 aa6.99□□□□□ -1.29
ITGB1-214ENST00000488427 NETO1Q8TDF5 533 aa6.99□□□□□ -1.29
ITGB1-214ENST00000488427 EAF1Q96JC9 268 aaPredicted RBP6.99□□□□□ -1.29
ITGB1-214ENST00000488427 CCDC74BQ96LY2 380 aa6.99□□□□□ -1.29
ITGB1-214ENST00000488427 CAPN10Q9HC96 672 aa6.99□□□□□ -1.29
ITGB1-214ENST00000488427 STRIP2Q9ULQ0 834 aa6.99□□□□□ -1.29
ITGB1-214ENST00000488427 POLR3KQ9Y2Y1 108 aaPredicted RBP6.99□□□□□ -1.29
ITGB1-214ENST00000488427 CORINQ9Y5Q5 1042 aa6.99□□□□□ -1.29
ITGB1-214ENST00000488427 FAM155AB1AL88 458 aaPredicted RBP6.98□□□□□ -1.29
ITGB1-214ENST00000488427 CRKP46108 304 aa6.98□□□□□ -1.29
ITGB1-214ENST00000488427 RACK1P63244 317 aaKnown RBP6.98□□□□□ -1.29
ITGB1-214ENST00000488427 RNF4P78317 190 aa6.98□□□□□ -1.29
ITGB1-214ENST00000488427 IFI16Q16666 785 aaKnown RBP6.98□□□□□ -1.29
ITGB1-214ENST00000488427 C22orf34Q6ZV56 151 aa6.98□□□□□ -1.29
ITGB1-214ENST00000488427 VSIG10LQ86VR7 867 aa6.98□□□□□ -1.29
ITGB1-214ENST00000488427 RASGRP4Q8TDF6 673 aa6.98□□□□□ -1.29
ITGB1-214ENST00000488427 SEC16BQ96JE7 1060 aa6.98□□□□□ -1.29
ITGB1-214ENST00000488427 KCNH3Q9ULD8 1083 aa6.98□□□□□ -1.29
ITGB1-214ENST00000488427 SNX11Q9Y5W9 270 aa6.98□□□□□ -1.29
ITGB1-214ENST00000488427 CEACAM5P06731 702 aa6.97□□□□□ -1.29
ITGB1-214ENST00000488427 GBP1P32455 592 aa6.97□□□□□ -1.29
ITGB1-214ENST00000488427 GJA8P48165 433 aa6.97□□□□□ -1.29
ITGB1-214ENST00000488427 CLCN7P51798 805 aa6.97□□□□□ -1.29
ITGB1-214ENST00000488427 C9orf131Q5VYM1 1079 aa6.97□□□□□ -1.29
ITGB1-214ENST00000488427 OR6P1Q8NGX9 317 aa6.97□□□□□ -1.29
ITGB1-214ENST00000488427 XAGE3Q8WTP9 111 aa6.97□□□□□ -1.29
ITGB1-214ENST00000488427 TMEM40Q8WWA1 233 aa6.97□□□□□ -1.29
ITGB1-214ENST00000488427 ZNF428Q96B54 188 aa6.97□□□□□ -1.29
ITGB1-214ENST00000488427 FBXL18Q96ME1 805 aa6.97□□□□□ -1.29
ITGB1-214ENST00000488427 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.97□□□□□ -1.29
ITGB1-214ENST00000488427 CEP131Q9UPN4 1083 aa6.97□□□□□ -1.29
ITGB1-214ENST00000488427 MEIS3P2A8K0S8 358 aa6.96□□□□□ -1.3
ITGB1-214ENST00000488427 LEFTY1O75610 366 aa6.96□□□□□ -1.3
ITGB1-214ENST00000488427 SLITRK5O94991 958 aa6.96□□□□□ -1.3
ITGB1-214ENST00000488427 FZD5Q13467 585 aa6.96□□□□□ -1.3
ITGB1-214ENST00000488427 FBXW10Q5XX13 1052 aa6.96□□□□□ -1.3
ITGB1-214ENST00000488427 UBE3DQ7Z6J8 389 aa6.96□□□□□ -1.3
ITGB1-214ENST00000488427 MFSD4AQ8N468 514 aa6.96□□□□□ -1.3
ITGB1-214ENST00000488427 PIWIL2Q8TC59 973 aaKnown RBP6.96□□□□□ -1.3
ITGB1-214ENST00000488427 CPLX3Q8WVH0 158 aa6.96□□□□□ -1.3
ITGB1-214ENST00000488427 DHRS1Q96LJ7 313 aa6.96□□□□□ -1.3
ITGB1-214ENST00000488427 DPH2Q9BQC3 489 aaPredicted RBP6.96□□□□□ -1.3
ITGB1-214ENST00000488427 ASPNQ9BXN1 380 aa6.96□□□□□ -1.3
ITGB1-214ENST00000488427 ADGRE2Q9UHX3 823 aa6.96□□□□□ -1.3
ITGB1-214ENST00000488427 ZNRF3Q9ULT6 936 aa6.96□□□□□ -1.3
ITGB1-214ENST00000488427 EOMESO95936 686 aa6.95□□□□□ -1.3
ITGB1-214ENST00000488427 CDCP2Q5VXM1 449 aa6.95□□□□□ -1.3
ITGB1-214ENST00000488427 NLRC3Q7RTR2 1065 aa6.95□□□□□ -1.3
ITGB1-214ENST00000488427 AGBL5Q8NDL9 886 aa6.95□□□□□ -1.3
ITGB1-214ENST00000488427 RNF141Q8WVD5 230 aa6.95□□□□□ -1.3
ITGB1-214ENST00000488427 HRASLS5Q96KN8 279 aa6.95□□□□□ -1.3
ITGB1-214ENST00000488427 TM9SF2Q99805 663 aa6.95□□□□□ -1.3
ITGB1-214ENST00000488427 VAV3Q9UKW4 847 aa6.95□□□□□ -1.3
ITGB1-214ENST00000488427 SLC5A6Q9Y289 635 aa6.95□□□□□ -1.3
ITGB1-214ENST00000488427 SLC12A7Q9Y666 1083 aa6.95□□□□□ -1.3
ITGB1-214ENST00000488427 SLC22A31A6NKX4 558 aa6.94□□□□□ -1.3
ITGB1-214ENST00000488427 RGS13O14921 159 aa6.94□□□□□ -1.3
ITGB1-214ENST00000488427 PRNPP04156 253 aa6.94□□□□□ -1.3
ITGB1-214ENST00000488427 ZNF865P0CJ78 1059 aaPredicted RBP6.94□□□□□ -1.3
ITGB1-214ENST00000488427 ITIH2P19823 946 aa6.94□□□□□ -1.3
ITGB1-214ENST00000488427 SOX9P48436 509 aa6.94□□□□□ -1.3
ITGB1-214ENST00000488427 CLCQ05315 142 aa6.94□□□□□ -1.3
ITGB1-214ENST00000488427 MSMPQ1L6U9 139 aa6.94□□□□□ -1.3
ITGB1-214ENST00000488427 ARSHQ5FYA8 562 aa6.94□□□□□ -1.3
ITGB1-214ENST00000488427 OVOS1Q6IE37 1185 aa6.94□□□□□ -1.3
ITGB1-214ENST00000488427 ASB11Q8WXH4 323 aa6.94□□□□□ -1.3
ITGB1-214ENST00000488427 ASCC2Q9H1I8 757 aaPredicted RBP6.94□□□□□ -1.3
ITGB1-214ENST00000488427 TRIT1Q9H3H1 467 aaKnown RBP6.94□□□□□ -1.3
ITGB1-214ENST00000488427 CNNM2Q9H8M5 875 aa6.94□□□□□ -1.3
ITGB1-214ENST00000488427 EFR3BQ9Y2G0 817 aa6.94□□□□□ -1.3
ITGB1-214ENST00000488427 CCDC180Q9P1Z9 1646 aa6.94□□□□□ -1.3
ITGB1-214ENST00000488427 ARID1BQ8NFD5 2236 aaPredicted RBP6.93□□□□□ -1.3
ITGB1-214ENST00000488427 OXCT1P55809 520 aa6.93□□□□□ -1.3
ITGB1-214ENST00000488427 EIF6P56537 245 aaKnown RBP6.93□□□□□ -1.3
ITGB1-214ENST00000488427 PRKCQQ04759 706 aa6.93□□□□□ -1.3
ITGB1-214ENST00000488427 INTS3Q68E01 1043 aaKnown RBP6.93□□□□□ -1.3
ITGB1-214ENST00000488427 CDH24Q86UP0 819 aa6.93□□□□□ -1.3
ITGB1-214ENST00000488427 TAB3Q8N5C8 712 aaPredicted RBP6.93□□□□□ -1.3
ITGB1-214ENST00000488427 SRRTQ9BXP5 876 aaKnown RBP6.93□□□□□ -1.3
ITGB1-214ENST00000488427 ACBD3Q9H3P7 528 aa6.93□□□□□ -1.3
ITGB1-214ENST00000488427 ZC3H7BQ9UGR2 993 aaKnown RBP6.93□□□□□ -1.3
ITGB1-214ENST00000488427 RB1CC1Q8TDY2 1594 aa6.92□□□□□ -1.3
ITGB1-214ENST00000488427 CHURC1-FNTBB4DL54 471 aa6.92□□□□□ -1.3
ITGB1-214ENST00000488427 CLEC3AO75596 197 aa6.92□□□□□ -1.3
ITGB1-214ENST00000488427 HOXA10P31260 410 aaPredicted RBP6.92□□□□□ -1.3
ITGB1-214ENST00000488427 ZC3H6P61129 1189 aaKnown RBP6.92□□□□□ -1.3
ITGB1-214ENST00000488427 BBS9Q3SYG4 887 aa6.92□□□□□ -1.3
ITGB1-214ENST00000488427 THAP5Q7Z6K1 395 aa6.92□□□□□ -1.3
ITGB1-214ENST00000488427 ABI1Q8IZP0 508 aa6.92□□□□□ -1.3
ITGB1-214ENST00000488427 FAM181AQ8N9Y4 354 aa6.92□□□□□ -1.3
ITGB1-214ENST00000488427 RBBP8NLQ8NC74 664 aaPredicted RBP6.92□□□□□ -1.3
ITGB1-214ENST00000488427 DNAJB8Q8NHS0 232 aa6.92□□□□□ -1.3
ITGB1-214ENST00000488427 ATG4CQ96DT6 458 aa6.92□□□□□ -1.3
ITGB1-214ENST00000488427 HEXIM2Q96MH2 286 aaKnown RBP6.92□□□□□ -1.3
ITGB1-214ENST00000488427 GINM1Q9NU53 330 aa6.92□□□□□ -1.3
ITGB1-214ENST00000488427 UPK3BL1B0FP48 263 aa6.91□□□□□ -1.3
ITGB1-214ENST00000488427 UPK3BL2E5RIL1 263 aa6.91□□□□□ -1.3
ITGB1-214ENST00000488427 CBX7O95931 251 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms