RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 RASAL3Q86YV0 1011 aa14.87□□□□□ -0.03
NELFE-209ENST00000488426 APOBEC3FQ8IUX4 373 aaKnown RBP14.87□□□□□ -0.03
NELFE-209ENST00000488426 TGFBRAP1Q8WUH2 860 aa14.87□□□□□ -0.03
NELFE-209ENST00000488426 TEKT1Q969V4 418 aa14.87□□□□□ -0.03
NELFE-209ENST00000488426 CSRNP1Q96S65 589 aa14.87□□□□□ -0.03
NELFE-209ENST00000488426 UBAC1Q9BSL1 405 aa14.87□□□□□ -0.03
NELFE-209ENST00000488426 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.87□□□□□ -0.03
NELFE-209ENST00000488426 ZNF70Q9UC06 446 aaPredicted RBP14.87□□□□□ -0.03
NELFE-209ENST00000488426 ECM29Q5VYK3 1845 aa14.87□□□□□ -0.03
NELFE-209ENST00000488426 SSC5DA1L4H1 1573 aa14.87□□□□□ -0.03
NELFE-209ENST00000488426 NID2Q14112 1375 aa14.87□□□□□ -0.03
NELFE-209ENST00000488426 JAK2O60674 1132 aa14.86□□□□□ -0.03
NELFE-209ENST00000488426 RCAN1P53805 252 aa14.86□□□□□ -0.03
NELFE-209ENST00000488426 WTAPQ15007 396 aa14.86□□□□□ -0.03
NELFE-209ENST00000488426 NFXL1Q6ZNB6 911 aa14.86□□□□□ -0.03
NELFE-209ENST00000488426 PRDM10Q9NQV6 1147 aa14.86□□□□□ -0.03
NELFE-209ENST00000488426 SERPINA10Q9UK55 444 aa14.86□□□□□ -0.03
NELFE-209ENST00000488426 MTMR6Q9Y217 621 aa14.86□□□□□ -0.03
NELFE-209ENST00000488426 ATP6V1DQ9Y5K8 247 aa14.86□□□□□ -0.03
NELFE-209ENST00000488426 FLT1P17948 1338 aa14.86□□□□□ -0.03
NELFE-209ENST00000488426 PTPDC1A2A3K4 754 aa14.86□□□□□ -0.03
NELFE-209ENST00000488426 CCDC69A6NI79 296 aa14.86□□□□□ -0.03
NELFE-209ENST00000488426 ZBTB43O43298 467 aa14.86□□□□□ -0.03
NELFE-209ENST00000488426 CTDNEP1O95476 244 aa14.86□□□□□ -0.03
NELFE-209ENST00000488426 CYP2D6P10635 497 aa14.86□□□□□ -0.03
NELFE-209ENST00000488426 MKRN3Q13064 507 aaKnown RBP14.86□□□□□ -0.03
NELFE-209ENST00000488426 RASA3Q14644 834 aa14.86□□□□□ -0.03
NELFE-209ENST00000488426 SPDYE2Q495Y8 402 aa14.86□□□□□ -0.03
NELFE-209ENST00000488426 IQCA1Q86XH1 822 aa14.86□□□□□ -0.03
NELFE-209ENST00000488426 CCDC102AQ96A19 550 aa14.86□□□□□ -0.03
NELFE-209ENST00000488426 NCOA5Q9HCD5 579 aaKnown RBP14.86□□□□□ -0.03
NELFE-209ENST00000488426 SMIM22K7EJ46 135 aa14.85□□□□□ -0.03
NELFE-209ENST00000488426 CAPN15O75808 1086 aa14.85□□□□□ -0.03
NELFE-209ENST00000488426 F13A1P00488 732 aa14.85□□□□□ -0.03
NELFE-209ENST00000488426 METAP2P50579 478 aaKnown RBP eCLIP14.85□□□□□ -0.03
NELFE-209ENST00000488426 FKBP1BP68106 108 aa14.85□□□□□ -0.03
NELFE-209ENST00000488426 SYNE3Q6ZMZ3 975 aa14.85□□□□□ -0.03
NELFE-209ENST00000488426 MAPKAPK5Q8IW41 473 aa14.85□□□□□ -0.03
NELFE-209ENST00000488426 STK11IPQ8N1F8 1099 aa14.85□□□□□ -0.03
NELFE-209ENST00000488426 FAM184AQ8NB25 1140 aa14.85□□□□□ -0.03
NELFE-209ENST00000488426 SLC12A7Q9Y666 1083 aa14.85□□□□□ -0.03
NELFE-209ENST00000488426 CASP8AP2Q9UKL3 1982 aa14.85□□□□□ -0.03
NELFE-209ENST00000488426 TCP10L2B9ZVM9 353 aa14.84□□□□□ -0.03
NELFE-209ENST00000488426 RANBP6O60518 1105 aaKnown RBP14.84□□□□□ -0.03
NELFE-209ENST00000488426 SEC23AQ15436 765 aa14.84□□□□□ -0.03
NELFE-209ENST00000488426 FOXD4L5Q5VV16 416 aaPredicted RBP14.84□□□□□ -0.03
NELFE-209ENST00000488426 APOBEC3HQ6NTF7 200 aaKnown RBP14.84□□□□□ -0.03
NELFE-209ENST00000488426 FOXD4L4Q8WXT5 416 aaPredicted RBP14.84□□□□□ -0.03
NELFE-209ENST00000488426 CLMNQ96JQ2 1002 aa14.84□□□□□ -0.03
NELFE-209ENST00000488426 ZDHHC15Q96MV8 337 aa14.84□□□□□ -0.03
NELFE-209ENST00000488426 ZSCAN10Q96SZ4 725 aaPredicted RBP14.84□□□□□ -0.03
NELFE-209ENST00000488426 BEGAINQ9BUH8 593 aa14.84□□□□□ -0.03
NELFE-209ENST00000488426 ZNF287Q9HBT7 754 aa14.84□□□□□ -0.03
NELFE-209ENST00000488426 PAPPA2Q9BXP8 1791 aa14.84□□□□□ -0.03
NELFE-209ENST00000488426 TNKSO95271 1327 aa14.84□□□□□ -0.03
NELFE-209ENST00000488426 VPS37CA5D8V6 355 aaPredicted RBP14.84□□□□□ -0.03
NELFE-209ENST00000488426 CPLX1O14810 134 aa14.84□□□□□ -0.03
NELFE-209ENST00000488426 CDKL5O76039 1030 aa14.84□□□□□ -0.03
NELFE-209ENST00000488426 POLR3DP05423 398 aaPredicted RBP14.84□□□□□ -0.03
NELFE-209ENST00000488426 LDLRAD1Q5T700 205 aa14.84□□□□□ -0.03
NELFE-209ENST00000488426 CPLX2Q6PUV4 134 aaKnown RBP14.84□□□□□ -0.03
NELFE-209ENST00000488426 TEPSINQ96N21 525 aa14.84□□□□□ -0.03
NELFE-209ENST00000488426 TMEM39BQ9GZU3 492 aa14.84□□□□□ -0.03
NELFE-209ENST00000488426 SENP2Q9HC62 589 aa14.84□□□□□ -0.03
NELFE-209ENST00000488426 MYO1BO43795 1136 aa14.83□□□□□ -0.04
NELFE-209ENST00000488426 USP2O75604 605 aaPredicted RBP14.83□□□□□ -0.04
NELFE-209ENST00000488426 SKOR2Q2VWA4 1001 aaPredicted RBP14.83□□□□□ -0.04
NELFE-209ENST00000488426 MCTP1Q6DN14 999 aa14.83□□□□□ -0.04
NELFE-209ENST00000488426 ZKSCAN3Q9BRR0 538 aa14.83□□□□□ -0.04
NELFE-209ENST00000488426 RNF186Q9NXI6 227 aa14.83□□□□□ -0.04
NELFE-209ENST00000488426 GOLGA8AA7E2F4 631 aa14.82□□□□□ -0.04
NELFE-209ENST00000488426 PRDM1O75626 825 aa14.82□□□□□ -0.04
NELFE-209ENST00000488426 TRPA1O75762 1119 aa14.82□□□□□ -0.04
NELFE-209ENST00000488426 EVX2Q03828 476 aa14.82□□□□□ -0.04
NELFE-209ENST00000488426 PPP2R5BQ15173 497 aa14.82□□□□□ -0.04
NELFE-209ENST00000488426 MICU3Q86XE3 530 aa14.82□□□□□ -0.04
NELFE-209ENST00000488426 RGS22Q8NE09 1264 aa14.82□□□□□ -0.04
NELFE-209ENST00000488426 DDX11Q96FC9 970 aa14.82□□□□□ -0.04
NELFE-209ENST00000488426 DTNBO60941 627 aa14.82□□□□□ -0.04
NELFE-209ENST00000488426 NF2P35240 595 aa14.82□□□□□ -0.04
NELFE-209ENST00000488426 CCDC178Q5BJE1 867 aa14.82□□□□□ -0.04
NELFE-209ENST00000488426 C16orf86Q6ZW13 317 aa14.82□□□□□ -0.04
NELFE-209ENST00000488426 ENAHQ8N8S7 591 aaPredicted RBP14.82□□□□□ -0.04
NELFE-209ENST00000488426 USP40Q9NVE5 1235 aa14.82□□□□□ -0.04
NELFE-209ENST00000488426 SAP30BPQ9UHR5 308 aaKnown RBP14.82□□□□□ -0.04
NELFE-209ENST00000488426 CCDC196A0A1B0GTZ2 297 aa14.81□□□□□ -0.04
NELFE-209ENST00000488426 TSPY2A6NKD2 308 aa14.81□□□□□ -0.04
NELFE-209ENST00000488426 TRAK2O60296 914 aa14.81□□□□□ -0.04
NELFE-209ENST00000488426 WDHD1O75717 1129 aaPredicted RBP14.81□□□□□ -0.04
NELFE-209ENST00000488426 PLCD1P51178 756 aa14.81□□□□□ -0.04
NELFE-209ENST00000488426 IFIT1BQ5T764 474 aaKnown RBP14.81□□□□□ -0.04
NELFE-209ENST00000488426 CDC42EP5Q6NZY7 148 aa14.81□□□□□ -0.04
NELFE-209ENST00000488426 ZNF654Q8IZM8 581 aa14.81□□□□□ -0.04
NELFE-209ENST00000488426 MKNK2Q9HBH9 465 aa14.81□□□□□ -0.04
NELFE-209ENST00000488426 H3BQV1 296 aa14.8□□□□□ -0.04
NELFE-209ENST00000488426 ARMC9Q7Z3E5 817 aa14.8□□□□□ -0.04
NELFE-209ENST00000488426 TTC6Q86TZ1 520 aa14.8□□□□□ -0.04
NELFE-209ENST00000488426 STK36Q9NRP7 1315 aa14.8□□□□□ -0.04
NELFE-209ENST00000488426 NPM3O75607 178 aaKnown RBP14.8□□□□□ -0.04
NELFE-209ENST00000488426 CALM1P0DP23 149 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms