RNA–Protein interactions for RNA: ENST00000488250.5

RAPGEF3-211, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 1,947 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-211ENST00000488250 IL17RBQ9NRM6 502 aa18.42■□□□□ 0.54
RAPGEF3-211ENST00000488250 TPM3P06753 285 aa18.41■□□□□ 0.54
RAPGEF3-211ENST00000488250 ALDH1B1P30837 517 aa18.41■□□□□ 0.54
RAPGEF3-211ENST00000488250 PDE6BP35913 854 aa18.41■□□□□ 0.54
RAPGEF3-211ENST00000488250 SYKP43405 635 aa18.41■□□□□ 0.54
RAPGEF3-211ENST00000488250 RHBDL3P58872 404 aa18.41■□□□□ 0.54
RAPGEF3-211ENST00000488250 NR5A1Q13285 461 aa18.41■□□□□ 0.54
RAPGEF3-211ENST00000488250 C11orf57Q6ZUT1 292 aaPredicted RBP18.41■□□□□ 0.54
RAPGEF3-211ENST00000488250 CEP131Q9UPN4 1083 aa18.41■□□□□ 0.54
RAPGEF3-211ENST00000488250 RGPD3A6NKT7 1758 aaPredicted RBP18.41■□□□□ 0.54
RAPGEF3-211ENST00000488250 RGPD4Q7Z3J3 1758 aa18.41■□□□□ 0.54
RAPGEF3-211ENST00000488250 PTPREP23469 700 aa18.41■□□□□ 0.54
RAPGEF3-211ENST00000488250 KRT2P35908 639 aa18.41■□□□□ 0.54
RAPGEF3-211ENST00000488250 SARM1Q6SZW1 724 aa18.41■□□□□ 0.54
RAPGEF3-211ENST00000488250 ZNF579Q8NAF0 562 aaKnown RBP18.41■□□□□ 0.54
RAPGEF3-211ENST00000488250 OXER1Q8TDS5 423 aa18.41■□□□□ 0.54
RAPGEF3-211ENST00000488250 DYNLL2Q96FJ2 89 aa18.41■□□□□ 0.54
RAPGEF3-211ENST00000488250 NAT10Q9H0A0 1025 aaKnown RBP18.41■□□□□ 0.54
RAPGEF3-211ENST00000488250 KAT14Q9H8E8 782 aa18.41■□□□□ 0.54
RAPGEF3-211ENST00000488250 MKNK2Q9HBH9 465 aa18.41■□□□□ 0.54
RAPGEF3-211ENST00000488250 VPS54Q9P1Q0 977 aa18.41■□□□□ 0.54
RAPGEF3-211ENST00000488250 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.41■□□□□ 0.54
RAPGEF3-211ENST00000488250 PLCB2Q00722 1185 aa18.4■□□□□ 0.54
RAPGEF3-211ENST00000488250 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.4■□□□□ 0.54
RAPGEF3-211ENST00000488250 PLA2G4DQ86XP0 818 aa18.4■□□□□ 0.54
RAPGEF3-211ENST00000488250 MAPKAPK5Q8IW41 473 aa18.4■□□□□ 0.54
RAPGEF3-211ENST00000488250 TEX11Q8IYF3 940 aa18.4■□□□□ 0.54
RAPGEF3-211ENST00000488250 CEP57L1Q8IYX8 460 aa18.4■□□□□ 0.54
RAPGEF3-211ENST00000488250 BPIFA3Q9BQP9 254 aa18.4■□□□□ 0.54
RAPGEF3-211ENST00000488250 PLCD1P51178 756 aa18.39■□□□□ 0.53
RAPGEF3-211ENST00000488250 C16orf86Q6ZW13 317 aa18.39■□□□□ 0.53
RAPGEF3-211ENST00000488250 FBXO2Q9UK22 296 aaPredicted RBP18.39■□□□□ 0.53
RAPGEF3-211ENST00000488250 TAOK2Q9UL54 1235 aa18.39■□□□□ 0.53
RAPGEF3-211ENST00000488250 QSER1Q2KHR3 1735 aa18.39■□□□□ 0.53
RAPGEF3-211ENST00000488250 TNS1Q9HBL0 1735 aaKnown RBP18.39■□□□□ 0.53
RAPGEF3-211ENST00000488250 FLT1P17948 1338 aa18.39■□□□□ 0.53
RAPGEF3-211ENST00000488250 NPY5RQ15761 445 aa18.39■□□□□ 0.53
RAPGEF3-211ENST00000488250 PFKFB3Q16875 520 aaPredicted RBP18.39■□□□□ 0.53
RAPGEF3-211ENST00000488250 ZNF444Q8N0Y2 327 aaPredicted RBP18.39■□□□□ 0.53
RAPGEF3-211ENST00000488250 TNFRSF25Q93038 417 aa18.39■□□□□ 0.53
RAPGEF3-211ENST00000488250 MASTLQ96GX5 879 aa18.39■□□□□ 0.53
RAPGEF3-211ENST00000488250 BRMS1Q9HCU9 246 aa18.39■□□□□ 0.53
RAPGEF3-211ENST00000488250 PARP3Q9Y6F1 533 aa18.39■□□□□ 0.53
RAPGEF3-211ENST00000488250 GOLGA6L6A8MZA4 724 aa18.38■□□□□ 0.53
RAPGEF3-211ENST00000488250 GOLGA6L19H0YKK7 550 aa18.38■□□□□ 0.53
RAPGEF3-211ENST00000488250 MMP10P09238 476 aa18.38■□□□□ 0.53
RAPGEF3-211ENST00000488250 TSPY3P0CV98 308 aa18.38■□□□□ 0.53
RAPGEF3-211ENST00000488250 TSPY8P0CW00 308 aa18.38■□□□□ 0.53
RAPGEF3-211ENST00000488250 SCG2P13521 617 aa18.38■□□□□ 0.53
RAPGEF3-211ENST00000488250 RASA1P20936 1047 aa18.38■□□□□ 0.53
RAPGEF3-211ENST00000488250 GNAQP50148 359 aa18.38■□□□□ 0.53
RAPGEF3-211ENST00000488250 ZNF75DP51815 510 aa18.38■□□□□ 0.53
RAPGEF3-211ENST00000488250 GRM4Q14833 912 aa18.38■□□□□ 0.53
RAPGEF3-211ENST00000488250 DHX40Q8IX18 779 aaKnown RBP18.38■□□□□ 0.53
RAPGEF3-211ENST00000488250 MPNDQ8N594 471 aa18.38■□□□□ 0.53
RAPGEF3-211ENST00000488250 PNMA1Q8ND90 353 aa18.38■□□□□ 0.53
RAPGEF3-211ENST00000488250 CLIC6Q96NY7 704 aa18.38■□□□□ 0.53
RAPGEF3-211ENST00000488250 CABP5Q9NP86 173 aa18.38■□□□□ 0.53
RAPGEF3-211ENST00000488250 TUBE1Q9UJT0 475 aa18.38■□□□□ 0.53
RAPGEF3-211ENST00000488250 PCDHB6Q9Y5E3 794 aa18.38■□□□□ 0.53
RAPGEF3-211ENST00000488250 SRPRBQ9Y5M8 271 aaKnown RBP18.38■□□□□ 0.53
RAPGEF3-211ENST00000488250 COL11A2P13942 1736 aaPredicted RBP18.38■□□□□ 0.53
RAPGEF3-211ENST00000488250 FOCADQ5VW36 1801 aa18.38■□□□□ 0.53
RAPGEF3-211ENST00000488250 BMP15O95972 392 aa18.37■□□□□ 0.53
RAPGEF3-211ENST00000488250 ZC3H12CQ9C0D7 883 aaKnown RBP18.37■□□□□ 0.53
RAPGEF3-211ENST00000488250 KCNH3Q9ULD8 1083 aa18.37■□□□□ 0.53
RAPGEF3-211ENST00000488250 CDC25BP30305 580 aa18.37■□□□□ 0.53
RAPGEF3-211ENST00000488250 NLRP12P59046 1061 aa18.37■□□□□ 0.53
RAPGEF3-211ENST00000488250 GTF2IP78347 998 aa18.37■□□□□ 0.53
RAPGEF3-211ENST00000488250 SH3GLB2Q9NR46 395 aa18.37■□□□□ 0.53
RAPGEF3-211ENST00000488250 DAGLAQ9Y4D2 1042 aa18.37■□□□□ 0.53
RAPGEF3-211ENST00000488250 SNED1Q8TER0 1413 aa18.37■□□□□ 0.53
RAPGEF3-211ENST00000488250 hCG_1642624A0A1W2PR95 340 aa18.36■□□□□ 0.53
RAPGEF3-211ENST00000488250 TRIM75PA6NK02 468 aa18.36■□□□□ 0.53
RAPGEF3-211ENST00000488250 CDK8P49336 464 aa18.36■□□□□ 0.53
RAPGEF3-211ENST00000488250 ZRSR1Q15695 479 aaKnown RBP18.36■□□□□ 0.53
RAPGEF3-211ENST00000488250 SLC4A8Q2Y0W8 1093 aa18.36■□□□□ 0.53
RAPGEF3-211ENST00000488250 FAM177A1Q8N128 213 aaPredicted RBP18.36■□□□□ 0.53
RAPGEF3-211ENST00000488250 NEDD1Q8NHV4 660 aa18.36■□□□□ 0.53
RAPGEF3-211ENST00000488250 SAP30BPQ9UHR5 308 aaKnown RBP18.36■□□□□ 0.53
RAPGEF3-211ENST00000488250 USP17L3A6NCW0 530 aa18.35■□□□□ 0.53
RAPGEF3-211ENST00000488250 USP17L4A6NCW7 530 aa18.35■□□□□ 0.53
RAPGEF3-211ENST00000488250 BECN2A8MW95 431 aa18.35■□□□□ 0.53
RAPGEF3-211ENST00000488250 OFD1O75665 1012 aa18.35■□□□□ 0.53
RAPGEF3-211ENST00000488250 NOVP48745 357 aa18.35■□□□□ 0.53
RAPGEF3-211ENST00000488250 DPP8Q6V1X1 898 aaPredicted RBP18.35■□□□□ 0.53
RAPGEF3-211ENST00000488250 KRBA2Q6ZNG9 492 aa18.35■□□□□ 0.53
RAPGEF3-211ENST00000488250 USP17L1Q7RTZ2 530 aa18.35■□□□□ 0.53
RAPGEF3-211ENST00000488250 SLC44A5Q8NCS7 719 aa18.35■□□□□ 0.53
RAPGEF3-211ENST00000488250 ERCC4Q92889 916 aaPredicted RBP18.35■□□□□ 0.53
RAPGEF3-211ENST00000488250 TRIM5Q9C035 493 aa18.35■□□□□ 0.53
RAPGEF3-211ENST00000488250 FAM13BQ9NYF5 915 aa18.35■□□□□ 0.53
RAPGEF3-211ENST00000488250 TRAPPC10P48553 1259 aa18.35■□□□□ 0.53
RAPGEF3-211ENST00000488250 KIAA2012Q0VF49 1180 aa18.35■□□□□ 0.53
RAPGEF3-211ENST00000488250 LZTS2Q9BRK4 669 aa18.35■□□□□ 0.53
RAPGEF3-211ENST00000488250 MAD2L2Q9UI95 211 aa18.35■□□□□ 0.53
RAPGEF3-211ENST00000488250 RIMBP2O15034 1052 aa18.34■□□□□ 0.53
RAPGEF3-211ENST00000488250 CALML3P27482 149 aa18.34■□□□□ 0.53
RAPGEF3-211ENST00000488250 DPCR1Q3MIW9 517 aa18.34■□□□□ 0.53
RAPGEF3-211ENST00000488250 MRFAP1L1Q96HT8 127 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms