RNA–Protein interactions for RNA: ENST00000488229.1

RPSAP4-201, Transcript of ribosomal protein SA pseudogene 4, humanhuman

BASIC

Gene RPSAP4, Length 888 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSAP4-201ENST00000488229 GPAA1O43292 621 aa13.75□□□□□ -0.21
RPSAP4-201ENST00000488229 CNMDO75829 334 aa13.75□□□□□ -0.21
RPSAP4-201ENST00000488229 IRX6P78412 446 aaPredicted RBP13.75□□□□□ -0.21
RPSAP4-201ENST00000488229 AAMPQ13685 434 aa13.75□□□□□ -0.21
RPSAP4-201ENST00000488229 RAB3GAP1Q15042 981 aa13.75□□□□□ -0.21
RPSAP4-201ENST00000488229 ZYXQ15942 572 aaKnown RBP13.75□□□□□ -0.21
RPSAP4-201ENST00000488229 Q3C1V9 767 aa13.75□□□□□ -0.21
RPSAP4-201ENST00000488229 SBK1Q52WX2 424 aa13.75□□□□□ -0.21
RPSAP4-201ENST00000488229 ZMYM1Q5SVZ6 1142 aa13.75□□□□□ -0.21
RPSAP4-201ENST00000488229 USP17L2Q6R6M4 530 aa13.75□□□□□ -0.21
RPSAP4-201ENST00000488229 KIAA1683Q9H0B3 1180 aa13.75□□□□□ -0.21
RPSAP4-201ENST00000488229 TACC3Q9Y6A5 838 aa13.75□□□□□ -0.21
RPSAP4-201ENST00000488229 FMNL1O95466 1100 aaPredicted RBP13.74□□□□□ -0.21
RPSAP4-201ENST00000488229 GNRH1P01148 92 aa13.74□□□□□ -0.21
RPSAP4-201ENST00000488229 NUCB1Q02818 461 aa13.74□□□□□ -0.21
RPSAP4-201ENST00000488229 MLLT1Q03111 559 aaPredicted RBP13.74□□□□□ -0.21
RPSAP4-201ENST00000488229 KIF22Q14807 665 aa13.74□□□□□ -0.21
RPSAP4-201ENST00000488229 FAM110CQ1W6H9 321 aa13.74□□□□□ -0.21
RPSAP4-201ENST00000488229 B4GALNT3Q6L9W6 998 aa13.74□□□□□ -0.21
RPSAP4-201ENST00000488229 CCDC129Q6ZRS4 1044 aa13.74□□□□□ -0.21
RPSAP4-201ENST00000488229 MORF4L1Q9UBU8 362 aa13.74□□□□□ -0.21
RPSAP4-201ENST00000488229 ROBO3Q96MS0 1386 aa13.73□□□□□ -0.21
RPSAP4-201ENST00000488229 MYPNQ86TC9 1320 aa13.73□□□□□ -0.21
RPSAP4-201ENST00000488229 MYH8P13535 1937 aa13.73□□□□□ -0.21
RPSAP4-201ENST00000488229 ERC2O15083 957 aa13.73□□□□□ -0.21
RPSAP4-201ENST00000488229 ZFYP08048 801 aaPredicted RBP13.73□□□□□ -0.21
RPSAP4-201ENST00000488229 VCAM1P19320 739 aa13.73□□□□□ -0.21
RPSAP4-201ENST00000488229 HERVK_113P62684 666 aa13.73□□□□□ -0.21
RPSAP4-201ENST00000488229 MTFR1Q15390 333 aa13.73□□□□□ -0.21
RPSAP4-201ENST00000488229 CATSPERGQ6ZRH7 1159 aa13.73□□□□□ -0.21
RPSAP4-201ENST00000488229 PLEKHM2Q8IWE5 1019 aa13.73□□□□□ -0.21
RPSAP4-201ENST00000488229 SMCR8Q8TEV9 937 aaPredicted RBP13.73□□□□□ -0.21
RPSAP4-201ENST00000488229 TMOD4Q9NZQ9 345 aa13.73□□□□□ -0.21
RPSAP4-201ENST00000488229 SWAP70Q9UH65 585 aa13.73□□□□□ -0.21
RPSAP4-201ENST00000488229 GJD2Q9UKL4 321 aa13.73□□□□□ -0.21
RPSAP4-201ENST00000488229 PNMA3Q9UL41 463 aa13.73□□□□□ -0.21
RPSAP4-201ENST00000488229 PATL2C9JE40 543 aaKnown RBP13.72□□□□□ -0.21
RPSAP4-201ENST00000488229 EN2P19622 333 aaPredicted RBP13.72□□□□□ -0.21
RPSAP4-201ENST00000488229 RASA1P20936 1047 aa13.72□□□□□ -0.21
RPSAP4-201ENST00000488229 GCLCP48506 637 aaPredicted RBP13.72□□□□□ -0.21
RPSAP4-201ENST00000488229 FLT3LGP49771 235 aa13.72□□□□□ -0.21
RPSAP4-201ENST00000488229 PRMT2P55345 433 aa13.72□□□□□ -0.21
RPSAP4-201ENST00000488229 FCGRTP55899 365 aa13.72□□□□□ -0.21
RPSAP4-201ENST00000488229 SLC9C1Q4G0N8 1177 aa13.72□□□□□ -0.21
RPSAP4-201ENST00000488229 VPS53Q5VIR6 699 aa13.72□□□□□ -0.21
RPSAP4-201ENST00000488229 GIMAP6Q6P9H5 292 aa13.72□□□□□ -0.21
RPSAP4-201ENST00000488229 CHD1LQ86WJ1 897 aa13.72□□□□□ -0.21
RPSAP4-201ENST00000488229 FSD1Q9BTV5 496 aa13.72□□□□□ -0.21
RPSAP4-201ENST00000488229 RWDD1Q9H446 243 aaPredicted RBP13.72□□□□□ -0.21
RPSAP4-201ENST00000488229 MPHOSPH10O00566 681 aaKnown RBP13.71□□□□□ -0.21
RPSAP4-201ENST00000488229 MYCP01106 439 aaPredicted RBP13.71□□□□□ -0.21
RPSAP4-201ENST00000488229 PDE4AP27815 886 aa13.71□□□□□ -0.21
RPSAP4-201ENST00000488229 ARHGEF6Q15052 776 aa13.71□□□□□ -0.21
RPSAP4-201ENST00000488229 TMEM179Q6ZVK1 233 aa13.71□□□□□ -0.21
RPSAP4-201ENST00000488229 IFNL3Q8IZI9 196 aa13.71□□□□□ -0.21
RPSAP4-201ENST00000488229 STK11IPQ8N1F8 1099 aa13.71□□□□□ -0.21
RPSAP4-201ENST00000488229 EVI5LQ96CN4 794 aa13.71□□□□□ -0.21
RPSAP4-201ENST00000488229 FAM227BQ96M60 508 aa13.71□□□□□ -0.21
RPSAP4-201ENST00000488229 PORCNQ9H237 461 aa13.71□□□□□ -0.21
RPSAP4-201ENST00000488229 CABP5Q9NP86 173 aa13.71□□□□□ -0.21
RPSAP4-201ENST00000488229 BTBD7Q9P203 1132 aa13.71□□□□□ -0.21
RPSAP4-201ENST00000488229 ARPP21Q9UBL0 812 aaPredicted RBP13.71□□□□□ -0.21
RPSAP4-201ENST00000488229 TAOK2Q9UL54 1235 aa13.71□□□□□ -0.21
RPSAP4-201ENST00000488229 PARP14Q460N5 1801 aa13.71□□□□□ -0.22
RPSAP4-201ENST00000488229 A0A0G2JMZ2 1700 aa13.7□□□□□ -0.22
RPSAP4-201ENST00000488229 IGKV6D-41A0A0C4DH26 115 aa13.7□□□□□ -0.22
RPSAP4-201ENST00000488229 A0A0D9SFI3 127 aa13.7□□□□□ -0.22
RPSAP4-201ENST00000488229 ELNP15502 786 aa13.7□□□□□ -0.22
RPSAP4-201ENST00000488229 IRX3P78415 501 aaPredicted RBP13.7□□□□□ -0.22
RPSAP4-201ENST00000488229 PABPC4Q13310 644 aaKnown RBP eCLIP13.7□□□□□ -0.22
RPSAP4-201ENST00000488229 IRF5Q13568 498 aa13.7□□□□□ -0.22
RPSAP4-201ENST00000488229 SHISA4Q96DD7 197 aa13.7□□□□□ -0.22
RPSAP4-201ENST00000488229 OSBPL3Q9H4L5 887 aa13.7□□□□□ -0.22
RPSAP4-201ENST00000488229 RPAP3Q9H6T3 665 aaPredicted RBP13.7□□□□□ -0.22
RPSAP4-201ENST00000488229 INCENPQ9NQS7 918 aa13.7□□□□□ -0.22
RPSAP4-201ENST00000488229 TMX2Q9Y320 296 aa13.7□□□□□ -0.22
RPSAP4-201ENST00000488229 SPDYE16A6NNV3 312 aaPredicted RBP13.69□□□□□ -0.22
RPSAP4-201ENST00000488229 MINDY4BA8MYZ0 360 aa13.69□□□□□ -0.22
RPSAP4-201ENST00000488229 USP17L15C9J2P7 530 aa13.69□□□□□ -0.22
RPSAP4-201ENST00000488229 USP17L13C9JLJ4 530 aa13.69□□□□□ -0.22
RPSAP4-201ENST00000488229 USP17L11C9JVI0 530 aa13.69□□□□□ -0.22
RPSAP4-201ENST00000488229 USP17L18D6R9N7 530 aa13.69□□□□□ -0.22
RPSAP4-201ENST00000488229 USP17L22D6RA61 530 aa13.69□□□□□ -0.22
RPSAP4-201ENST00000488229 USP17L17D6RBQ6 530 aa13.69□□□□□ -0.22
RPSAP4-201ENST00000488229 USP17L19D6RCP7 530 aa13.69□□□□□ -0.22
RPSAP4-201ENST00000488229 USP17L20D6RJB6 530 aa13.69□□□□□ -0.22
RPSAP4-201ENST00000488229 TNPO2O14787 897 aaKnown RBP13.69□□□□□ -0.22
RPSAP4-201ENST00000488229 EEF2P13639 858 aaKnown RBP13.69□□□□□ -0.22
RPSAP4-201ENST00000488229 HOXD10P28358 340 aa13.69□□□□□ -0.22
RPSAP4-201ENST00000488229 GRK4P32298 578 aa13.69□□□□□ -0.22
RPSAP4-201ENST00000488229 USP14P54578 494 aa13.69□□□□□ -0.22
RPSAP4-201ENST00000488229 ERVK-9P63128 1117 aa13.69□□□□□ -0.22
RPSAP4-201ENST00000488229 ERVK-24P63145 666 aa13.69□□□□□ -0.22
RPSAP4-201ENST00000488229 USP17L24Q0WX57 530 aa13.69□□□□□ -0.22
RPSAP4-201ENST00000488229 LBX2Q6XYB7 198 aa13.69□□□□□ -0.22
RPSAP4-201ENST00000488229 NKX2-3Q8TAU0 364 aa13.69□□□□□ -0.22
RPSAP4-201ENST00000488229 USP6NLQ92738 828 aa13.69□□□□□ -0.22
RPSAP4-201ENST00000488229 CCDC17Q96LX7 622 aa13.69□□□□□ -0.22
RPSAP4-201ENST00000488229 FEZ1Q99689 392 aa13.69□□□□□ -0.22
RPSAP4-201ENST00000488229 KIAA0100Q14667 2235 aaKnown RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms