RNA–Protein interactions for RNA: ENST00000488106.1

RHBDD3-205, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 640 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-205ENST00000488106 PKN2Q16513 984 aaKnown RBP28.31■■■□□ 2.12
RHBDD3-205ENST00000488106 IFNL3Q8IZI9 196 aa28.31■■■□□ 2.12
RHBDD3-205ENST00000488106 NACAP1Q9BZK3 213 aa28.31■■■□□ 2.12
RHBDD3-205ENST00000488106 ARHGAP39Q9C0H5 1083 aa28.31■■■□□ 2.12
RHBDD3-205ENST00000488106 EFCC1Q9HA90 598 aa28.31■■■□□ 2.12
RHBDD3-205ENST00000488106 PNMA3Q9UL41 463 aa28.31■■■□□ 2.12
RHBDD3-205ENST00000488106 TAOK2Q9UL54 1235 aa28.31■■■□□ 2.12
RHBDD3-205ENST00000488106 ROBO3Q96MS0 1386 aa28.31■■■□□ 2.12
RHBDD3-205ENST00000488106 NMIQ13287 307 aaPredicted RBP28.3■■■□□ 2.12
RHBDD3-205ENST00000488106 PABPC4Q13310 644 aaKnown RBP eCLIP28.3■■■□□ 2.12
RHBDD3-205ENST00000488106 ACER1Q8TDN7 264 aa28.3■■■□□ 2.12
RHBDD3-205ENST00000488106 HELLSQ9NRZ9 838 aa28.3■■■□□ 2.12
RHBDD3-205ENST00000488106 CCDC85CA6NKD9 419 aa28.29■■■□□ 2.12
RHBDD3-205ENST00000488106 KIF22Q14807 665 aa28.29■■■□□ 2.12
RHBDD3-205ENST00000488106 USP17L2Q6R6M4 530 aa28.29■■■□□ 2.12
RHBDD3-205ENST00000488106 TMEM179Q6ZVK1 233 aa28.29■■■□□ 2.12
RHBDD3-205ENST00000488106 CLEC10AQ8IUN9 316 aa28.29■■■□□ 2.12
RHBDD3-205ENST00000488106 NAPBQ9H115 298 aa28.29■■■□□ 2.12
RHBDD3-205ENST00000488106 BCRP11274 1271 aa28.28■■■□□ 2.12
RHBDD3-205ENST00000488106 OSBPP22059 807 aa28.28■■■□□ 2.12
RHBDD3-205ENST00000488106 FBXO46Q6PJ61 603 aaPredicted RBP28.28■■■□□ 2.12
RHBDD3-205ENST00000488106 ASCC2Q9H1I8 757 aaPredicted RBP28.28■■■□□ 2.12
RHBDD3-205ENST00000488106 EMILIN3Q9NT22 766 aa28.28■■■□□ 2.12
RHBDD3-205ENST00000488106 RLFQ13129 1914 aa28.28■■■□□ 2.12
RHBDD3-205ENST00000488106 COL11A1P12107 1806 aaPredicted RBP28.27■■■□□ 2.12
RHBDD3-205ENST00000488106 IRX3P78415 501 aaPredicted RBP28.27■■■□□ 2.12
RHBDD3-205ENST00000488106 VPS53Q5VIR6 699 aa28.27■■■□□ 2.12
RHBDD3-205ENST00000488106 CCDC17Q96LX7 622 aa28.27■■■□□ 2.12
RHBDD3-205ENST00000488106 HPS5Q9UPZ3 1129 aa28.27■■■□□ 2.12
RHBDD3-205ENST00000488106 FOXP2O15409 715 aa28.26■■■□□ 2.11
RHBDD3-205ENST00000488106 MCMDC2Q4G0Z9 681 aa28.26■■■□□ 2.11
RHBDD3-205ENST00000488106 KIAA1683Q9H0B3 1180 aa28.26■■■□□ 2.11
RHBDD3-205ENST00000488106 SDSP20132 328 aa28.25■■■□□ 2.11
RHBDD3-205ENST00000488106 USP14P54578 494 aa28.25■■■□□ 2.11
RHBDD3-205ENST00000488106 ICA1Q05084 483 aa28.25■■■□□ 2.11
RHBDD3-205ENST00000488106 ARHGEF6Q15052 776 aa28.25■■■□□ 2.11
RHBDD3-205ENST00000488106 TICAM2Q86XR7 235 aa28.25■■■□□ 2.11
RHBDD3-205ENST00000488106 MKNK2Q9HBH9 465 aa28.25■■■□□ 2.11
RHBDD3-205ENST00000488106 CTGFP29279 349 aa28.24■■■□□ 2.11
RHBDD3-205ENST00000488106 TTC22Q5TAA0 569 aa28.24■■■□□ 2.11
RHBDD3-205ENST00000488106 ZNF589Q86UQ0 364 aaPredicted RBP28.24■■■□□ 2.11
RHBDD3-205ENST00000488106 ANKRD13CQ8N6S4 541 aa28.24■■■□□ 2.11
RHBDD3-205ENST00000488106 DIAPH3Q9NSV4 1193 aa28.24■■■□□ 2.11
RHBDD3-205ENST00000488106 CCDC171Q6TFL3 1326 aa28.23■■■□□ 2.11
RHBDD3-205ENST00000488106 A0A1W2PRG0 241 aa28.23■■■□□ 2.11
RHBDD3-205ENST00000488106 RASA1P20936 1047 aa28.23■■■□□ 2.11
RHBDD3-205ENST00000488106 PSMC4P43686 418 aa28.23■■■□□ 2.11
RHBDD3-205ENST00000488106 PPARAQ07869 468 aa28.23■■■□□ 2.11
RHBDD3-205ENST00000488106 C12orf42Q96LP6 360 aa28.23■■■□□ 2.11
RHBDD3-205ENST00000488106 PTPN22Q9Y2R2 807 aa28.23■■■□□ 2.11
RHBDD3-205ENST00000488106 A0A0G2JMZ2 1700 aa28.22■■■□□ 2.11
RHBDD3-205ENST00000488106 PRDM1O75626 825 aa28.22■■■□□ 2.11
RHBDD3-205ENST00000488106 GSPT1P15170 499 aaKnown RBP28.22■■■□□ 2.11
RHBDD3-205ENST00000488106 VCAM1P19320 739 aa28.22■■■□□ 2.11
RHBDD3-205ENST00000488106 HOXA7P31268 230 aaPredicted RBP28.22■■■□□ 2.11
RHBDD3-205ENST00000488106 TRIM47Q96LD4 638 aa28.22■■■□□ 2.11
RHBDD3-205ENST00000488106 ARHGEF10LQ9HCE6 1279 aa28.22■■■□□ 2.11
RHBDD3-205ENST00000488106 PLXNB2O15031 1838 aa28.22■■■□□ 2.11
RHBDD3-205ENST00000488106 FMNL1O95466 1100 aaPredicted RBP28.21■■■□□ 2.11
RHBDD3-205ENST00000488106 ATP2B2Q01814 1243 aa28.21■■■□□ 2.11
RHBDD3-205ENST00000488106 CWC27Q6UX04 472 aaKnown RBP28.21■■■□□ 2.11
RHBDD3-205ENST00000488106 RBBP6Q7Z6E9 1792 aaKnown RBP28.21■■■□□ 2.11
RHBDD3-205ENST00000488106 KIAA0100Q14667 2235 aaKnown RBP28.2■■■□□ 2.11
RHBDD3-205ENST00000488106 SLC3A2P08195 630 aaKnown RBP28.2■■■□□ 2.1
RHBDD3-205ENST00000488106 GCLCP48506 637 aaPredicted RBP28.2■■■□□ 2.1
RHBDD3-205ENST00000488106 FAM110CQ1W6H9 321 aa28.2■■■□□ 2.1
RHBDD3-205ENST00000488106 ZNF287Q9HBT7 754 aa28.2■■■□□ 2.1
RHBDD3-205ENST00000488106 FCGRTP55899 365 aa28.19■■■□□ 2.1
RHBDD3-205ENST00000488106 HERVK_113P62684 666 aa28.19■■■□□ 2.1
RHBDD3-205ENST00000488106 P2RX7Q99572 595 aaKnown RBP28.19■■■□□ 2.1
RHBDD3-205ENST00000488106 SH2D4AQ9H788 454 aa28.19■■■□□ 2.1
RHBDD3-205ENST00000488106 PTCH2Q9Y6C5 1203 aa28.19■■■□□ 2.1
RHBDD3-205ENST00000488106 USP17L15C9J2P7 530 aa28.18■■■□□ 2.1
RHBDD3-205ENST00000488106 USP17L13C9JLJ4 530 aa28.18■■■□□ 2.1
RHBDD3-205ENST00000488106 USP17L11C9JVI0 530 aa28.18■■■□□ 2.1
RHBDD3-205ENST00000488106 USP17L18D6R9N7 530 aa28.18■■■□□ 2.1
RHBDD3-205ENST00000488106 USP17L22D6RA61 530 aa28.18■■■□□ 2.1
RHBDD3-205ENST00000488106 USP17L17D6RBQ6 530 aa28.18■■■□□ 2.1
RHBDD3-205ENST00000488106 USP17L19D6RCP7 530 aa28.18■■■□□ 2.1
RHBDD3-205ENST00000488106 USP17L20D6RJB6 530 aa28.18■■■□□ 2.1
RHBDD3-205ENST00000488106 HIP1O00291 1037 aa28.18■■■□□ 2.1
RHBDD3-205ENST00000488106 CTDSPL2Q05D32 466 aa28.18■■■□□ 2.1
RHBDD3-205ENST00000488106 PDE4BQ07343 736 aa28.18■■■□□ 2.1
RHBDD3-205ENST00000488106 USP17L24Q0WX57 530 aa28.18■■■□□ 2.1
RHBDD3-205ENST00000488106 SIAH1Q8IUQ4 282 aa28.18■■■□□ 2.1
RHBDD3-205ENST00000488106 GNL3Q9BVP2 549 aaKnown RBP eCLIP28.18■■■□□ 2.1
RHBDD3-205ENST00000488106 RPAP3Q9H6T3 665 aaPredicted RBP28.18■■■□□ 2.1
RHBDD3-205ENST00000488106 KANSL2Q9H9L4 492 aa28.18■■■□□ 2.1
RHBDD3-205ENST00000488106 GNRH1P01148 92 aa28.17■■■□□ 2.1
RHBDD3-205ENST00000488106 HSPD1P10809 573 aaKnown RBP28.17■■■□□ 2.1
RHBDD3-205ENST00000488106 EEF2P13639 858 aaKnown RBP28.17■■■□□ 2.1
RHBDD3-205ENST00000488106 MFAP1P55081 439 aaKnown RBP28.17■■■□□ 2.1
RHBDD3-205ENST00000488106 ZNF444Q8N0Y2 327 aaPredicted RBP28.17■■■□□ 2.1
RHBDD3-205ENST00000488106 TMX2Q9Y320 296 aa28.17■■■□□ 2.1
RHBDD3-205ENST00000488106 BRCA2P51587 3418 aa28.17■■■□□ 2.1
RHBDD3-205ENST00000488106 PEX10O60683 326 aa28.16■■■□□ 2.1
RHBDD3-205ENST00000488106 KIAA1755Q5JYT7 1200 aa28.16■■■□□ 2.1
RHBDD3-205ENST00000488106 CENPQQ7L2Z9 268 aaPredicted RBP28.16■■■□□ 2.1
RHBDD3-205ENST00000488106 SPICE1Q8N0Z3 855 aa28.16■■■□□ 2.1
RHBDD3-205ENST00000488106 PAGR1Q9BTK6 254 aa28.16■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms