RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 KAT14Q9H8E8 782 aa12.94□□□□□ -0.34
HDLBP-242ENST00000488013 MTMR4Q9NYA4 1195 aa12.94□□□□□ -0.34
HDLBP-242ENST00000488013 NYAP2Q9P242 653 aa12.94□□□□□ -0.34
HDLBP-242ENST00000488013 STX8Q9UNK0 236 aa12.94□□□□□ -0.34
HDLBP-242ENST00000488013 IGKV6D-41A0A0C4DH26 115 aa12.93□□□□□ -0.34
HDLBP-242ENST00000488013 DDAH1O94760 285 aa12.93□□□□□ -0.34
HDLBP-242ENST00000488013 AKR1B1P15121 316 aa12.93□□□□□ -0.34
HDLBP-242ENST00000488013 SEC23AQ15436 765 aa12.93□□□□□ -0.34
HDLBP-242ENST00000488013 NOL9Q5SY16 702 aaKnown RBP12.93□□□□□ -0.34
HDLBP-242ENST00000488013 MAP1SQ66K74 1059 aaPredicted RBP12.93□□□□□ -0.34
HDLBP-242ENST00000488013 CPLX2Q6PUV4 134 aaKnown RBP12.93□□□□□ -0.34
HDLBP-242ENST00000488013 SCYL3Q8IZE3 742 aa12.93□□□□□ -0.34
HDLBP-242ENST00000488013 ENAHQ8N8S7 591 aaPredicted RBP12.93□□□□□ -0.34
HDLBP-242ENST00000488013 SMC1BQ8NDV3 1235 aa12.93□□□□□ -0.34
HDLBP-242ENST00000488013 BRF1Q92994 677 aa12.93□□□□□ -0.34
HDLBP-242ENST00000488013 MKL1Q969V6 931 aa12.93□□□□□ -0.34
HDLBP-242ENST00000488013 WRNIP1Q96S55 665 aa12.93□□□□□ -0.34
HDLBP-242ENST00000488013 MAP3K14Q99558 947 aa12.93□□□□□ -0.34
HDLBP-242ENST00000488013 LY9Q9HBG7 655 aa12.93□□□□□ -0.34
HDLBP-242ENST00000488013 AS3MTQ9HBK9 375 aa12.93□□□□□ -0.34
HDLBP-242ENST00000488013 ARHGEF10LQ9HCE6 1279 aa12.93□□□□□ -0.34
HDLBP-242ENST00000488013 ZBTB21Q9ULJ3 1066 aa12.93□□□□□ -0.34
HDLBP-242ENST00000488013 CSADQ9Y600 493 aa12.93□□□□□ -0.34
HDLBP-242ENST00000488013 TACC3Q9Y6A5 838 aa12.93□□□□□ -0.34
HDLBP-242ENST00000488013 SMIM22K7EJ46 135 aa12.92□□□□□ -0.34
HDLBP-242ENST00000488013 K7ELQ4 463 aaPredicted RBP12.92□□□□□ -0.34
HDLBP-242ENST00000488013 GH2P01242 217 aa12.92□□□□□ -0.34
HDLBP-242ENST00000488013 YY1P25490 414 aa12.92□□□□□ -0.34
HDLBP-242ENST00000488013 KIF5BP33176 963 aa12.92□□□□□ -0.34
HDLBP-242ENST00000488013 EVX2Q03828 476 aa12.92□□□□□ -0.34
HDLBP-242ENST00000488013 ICA1Q05084 483 aa12.92□□□□□ -0.34
HDLBP-242ENST00000488013 TTLL12Q14166 644 aaPredicted RBP12.92□□□□□ -0.34
HDLBP-242ENST00000488013 CHST3Q7LGC8 479 aa12.92□□□□□ -0.34
HDLBP-242ENST00000488013 ANKRD13AQ8IZ07 590 aa12.92□□□□□ -0.34
HDLBP-242ENST00000488013 C2orf69Q8N8R5 385 aa12.92□□□□□ -0.34
HDLBP-242ENST00000488013 CEP95Q96GE4 821 aa12.92□□□□□ -0.34
HDLBP-242ENST00000488013 IL17RBQ9NRM6 502 aa12.92□□□□□ -0.34
HDLBP-242ENST00000488013 FAM196BA6NMK8 535 aa12.91□□□□□ -0.34
HDLBP-242ENST00000488013 USP17L5A8MUK1 530 aa12.91□□□□□ -0.34
HDLBP-242ENST00000488013 ZBTB43O43298 467 aa12.91□□□□□ -0.34
HDLBP-242ENST00000488013 USP2O75604 605 aaPredicted RBP12.91□□□□□ -0.34
HDLBP-242ENST00000488013 TOMM70O94826 608 aa12.91□□□□□ -0.34
HDLBP-242ENST00000488013 CPA1P15085 419 aa12.91□□□□□ -0.34
HDLBP-242ENST00000488013 GNAQP50148 359 aa12.91□□□□□ -0.34
HDLBP-242ENST00000488013 FXR2P51116 673 aaKnown RBP eCLIP12.91□□□□□ -0.344e-12■□□□□ 10.5
HDLBP-242ENST00000488013 TOB2Q14106 344 aaPredicted RBP12.91□□□□□ -0.34
HDLBP-242ENST00000488013 RAB3GAP1Q15042 981 aa12.91□□□□□ -0.34
HDLBP-242ENST00000488013 PRAMEF18Q5VWM3 479 aa12.91□□□□□ -0.34
HDLBP-242ENST00000488013 RCSD1Q6JBY9 416 aa12.91□□□□□ -0.34
HDLBP-242ENST00000488013 CDAN1Q8IWY9 1227 aa12.91□□□□□ -0.34
HDLBP-242ENST00000488013 PIP4P2Q8N4L2 257 aa12.91□□□□□ -0.34
HDLBP-242ENST00000488013 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.91□□□□□ -0.34
HDLBP-242ENST00000488013 RBM46Q8TBY0 533 aaKnown RBP12.91□□□□□ -0.34
HDLBP-242ENST00000488013 TCEANC2Q96MN5 208 aa12.91□□□□□ -0.34
HDLBP-242ENST00000488013 LZTS2Q9BRK4 669 aa12.91□□□□□ -0.34
HDLBP-242ENST00000488013 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.91□□□□□ -0.34
HDLBP-242ENST00000488013 SLKQ9H2G2 1235 aaPredicted RBP12.91□□□□□ -0.34
HDLBP-242ENST00000488013 SCAF8Q9UPN6 1271 aaKnown RBP12.91□□□□□ -0.34
HDLBP-242ENST00000488013 KLF18A0A0U1RQI7 1052 aa12.9□□□□□ -0.34
HDLBP-242ENST00000488013 CDKL5O76039 1030 aa12.9□□□□□ -0.34
HDLBP-242ENST00000488013 GDF11O95390 407 aa12.9□□□□□ -0.34
HDLBP-242ENST00000488013 HSP90AA1P07900 732 aaKnown RBP12.9□□□□□ -0.34
HDLBP-242ENST00000488013 USP14P54578 494 aa12.9□□□□□ -0.34
HDLBP-242ENST00000488013 FSTL1Q12841 308 aa12.9□□□□□ -0.34
HDLBP-242ENST00000488013 SEPT2Q15019 361 aa12.9□□□□□ -0.34
HDLBP-242ENST00000488013 APOA5Q6Q788 366 aa12.9□□□□□ -0.34
HDLBP-242ENST00000488013 PNMA1Q8ND90 353 aa12.9□□□□□ -0.34
HDLBP-242ENST00000488013 CTCFLQ8NI51 663 aaPredicted RBP12.9□□□□□ -0.34
HDLBP-242ENST00000488013 INTS4Q96HW7 963 aaKnown RBP12.9□□□□□ -0.34
HDLBP-242ENST00000488013 TMX3Q96JJ7 454 aa12.9□□□□□ -0.34
HDLBP-242ENST00000488013 ZKSCAN3Q9BRR0 538 aa12.9□□□□□ -0.34
HDLBP-242ENST00000488013 WDR18Q9BV38 432 aa12.9□□□□□ -0.34
HDLBP-242ENST00000488013 LRRC2Q9BYS8 371 aa12.9□□□□□ -0.34
HDLBP-242ENST00000488013 GOPCQ9HD26 462 aa12.9□□□□□ -0.34
HDLBP-242ENST00000488013 RBM28Q9NW13 759 aaKnown RBP12.9□□□□□ -0.34
HDLBP-242ENST00000488013 CLIP2Q9UDT6 1046 aa12.9□□□□□ -0.34
HDLBP-242ENST00000488013 TPCN1Q9ULQ1 816 aa12.9□□□□□ -0.34
HDLBP-242ENST00000488013 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.9□□□□□ -0.34
HDLBP-242ENST00000488013 DDX60LQ5H9U9 1706 aaKnown RBP12.89□□□□□ -0.35
HDLBP-242ENST00000488013 GOLGA8BA8MQT2 603 aa12.89□□□□□ -0.35
HDLBP-242ENST00000488013 C19orf81C9J6K1 198 aa12.89□□□□□ -0.35
HDLBP-242ENST00000488013 KIF3CO14782 793 aa12.89□□□□□ -0.35
HDLBP-242ENST00000488013 CPLX1O14810 134 aa12.89□□□□□ -0.35
HDLBP-242ENST00000488013 PFKFB2O60825 505 aa12.89□□□□□ -0.35
HDLBP-242ENST00000488013 ITGBL1O95965 494 aaPredicted RBP12.89□□□□□ -0.35
HDLBP-242ENST00000488013 POTEIP0CG38 1075 aa12.89□□□□□ -0.35
HDLBP-242ENST00000488013 POTEJP0CG39 1038 aa12.89□□□□□ -0.35
HDLBP-242ENST00000488013 EEF2P13639 858 aaKnown RBP12.89□□□□□ -0.35
HDLBP-242ENST00000488013 PDIA4P13667 645 aaKnown RBP12.89□□□□□ -0.35
HDLBP-242ENST00000488013 PDIA3P30101 505 aaKnown RBP12.89□□□□□ -0.35
HDLBP-242ENST00000488013 METAP2P50579 478 aaKnown RBP eCLIP12.89□□□□□ -0.356e-8■□□□□ 10.4
HDLBP-242ENST00000488013 ZNF654Q8IZM8 581 aa12.89□□□□□ -0.35
HDLBP-242ENST00000488013 GMCL1P1Q8NEA9 526 aa12.89□□□□□ -0.35
HDLBP-242ENST00000488013 LPAR1Q92633 364 aa12.89□□□□□ -0.35
HDLBP-242ENST00000488013 TMEM47Q9BQJ4 181 aa12.89□□□□□ -0.35
HDLBP-242ENST00000488013 LLPHQ9BRT6 129 aaKnown RBP12.89□□□□□ -0.35
HDLBP-242ENST00000488013 GBA2Q9HCG7 927 aaPredicted RBP12.89□□□□□ -0.35
HDLBP-242ENST00000488013 NAP1L2Q9ULW6 460 aaPredicted RBP12.89□□□□□ -0.35
HDLBP-242ENST00000488013 TMX2Q9Y320 296 aa12.89□□□□□ -0.35
HDLBP-242ENST00000488013 KIF3AQ9Y496 699 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms