RNA–Protein interactions for RNA: ENST00000487952.1

NUP188-207, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 568 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-207ENST00000487952 STX8Q9UNK0 236 aa16.54■□□□□ 0.24
NUP188-207ENST00000487952 CYP46A1Q9Y6A2 500 aa16.54■□□□□ 0.24
NUP188-207ENST00000487952 TNKSO95271 1327 aa16.53■□□□□ 0.24
NUP188-207ENST00000487952 SPDYE5A6NIY4 337 aa16.53■□□□□ 0.24
NUP188-207ENST00000487952 GUCY1A2P33402 732 aa16.53■□□□□ 0.24
NUP188-207ENST00000487952 ZNF157P51786 506 aaPredicted RBP16.53■□□□□ 0.24
NUP188-207ENST00000487952 PPATQ06203 517 aa16.53■□□□□ 0.24
NUP188-207ENST00000487952 RGMBQ6NW40 437 aa16.53■□□□□ 0.24
NUP188-207ENST00000487952 CHST3Q7LGC8 479 aa16.53■□□□□ 0.24
NUP188-207ENST00000487952 CCDC84Q86UT8 332 aaPredicted RBP16.53■□□□□ 0.24
NUP188-207ENST00000487952 OPTNQ96CV9 577 aa16.53■□□□□ 0.24
NUP188-207ENST00000487952 OTUD5Q96G74 571 aa16.53■□□□□ 0.24
NUP188-207ENST00000487952 TMEM87BQ96K49 555 aa16.53■□□□□ 0.24
NUP188-207ENST00000487952 ZSCAN10Q96SZ4 725 aaPredicted RBP16.53■□□□□ 0.24
NUP188-207ENST00000487952 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.53■□□□□ 0.24
NUP188-207ENST00000487952 UPF3BQ9BZI7 483 aaKnown RBP16.53■□□□□ 0.24
NUP188-207ENST00000487952 MTMR4Q9NYA4 1195 aa16.53■□□□□ 0.24
NUP188-207ENST00000487952 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.53■□□□□ 0.24
NUP188-207ENST00000487952 ZHX2Q9Y6X8 837 aa16.53■□□□□ 0.24
NUP188-207ENST00000487952 DOCK1Q14185 1865 aa16.52■□□□□ 0.24
NUP188-207ENST00000487952 WDR19Q8NEZ3 1342 aa16.52■□□□□ 0.24
NUP188-207ENST00000487952 IGKV6D-41A0A0C4DH26 115 aa16.52■□□□□ 0.24
NUP188-207ENST00000487952 NMT2O60551 498 aa16.52■□□□□ 0.24
NUP188-207ENST00000487952 TTLL1O95922 423 aa16.52■□□□□ 0.24
NUP188-207ENST00000487952 RPS6KB1P23443 525 aa16.52■□□□□ 0.24
NUP188-207ENST00000487952 PPIL2Q13356 520 aa16.52■□□□□ 0.24
NUP188-207ENST00000487952 WTAPQ15007 396 aa16.52■□□□□ 0.24
NUP188-207ENST00000487952 TMEM67Q5HYA8 995 aa16.52■□□□□ 0.24
NUP188-207ENST00000487952 RUFY3Q7L099 469 aa16.52■□□□□ 0.24
NUP188-207ENST00000487952 CLEC10AQ8IUN9 316 aa16.52■□□□□ 0.24
NUP188-207ENST00000487952 TTC14Q96N46 770 aa16.52■□□□□ 0.24
NUP188-207ENST00000487952 MTA3Q9BTC8 594 aa16.52■□□□□ 0.24
NUP188-207ENST00000487952 ZSWIM6Q9HCJ5 1215 aa16.52■□□□□ 0.24
NUP188-207ENST00000487952 NYAP2Q9P242 653 aa16.52■□□□□ 0.24
NUP188-207ENST00000487952 CLIP2Q9UDT6 1046 aa16.52■□□□□ 0.24
NUP188-207ENST00000487952 TRIM75PA6NK02 468 aa16.51■□□□□ 0.23
NUP188-207ENST00000487952 EEF2P13639 858 aaKnown RBP16.51■□□□□ 0.23
NUP188-207ENST00000487952 CPA1P15085 419 aa16.51■□□□□ 0.23
NUP188-207ENST00000487952 ANTXR2P58335 489 aa16.51■□□□□ 0.23
NUP188-207ENST00000487952 C1QTNF8P60827 252 aa16.51■□□□□ 0.23
NUP188-207ENST00000487952 IFIT1BQ5T764 474 aaKnown RBP16.51■□□□□ 0.23
NUP188-207ENST00000487952 DGKHQ86XP1 1220 aa16.51■□□□□ 0.23
NUP188-207ENST00000487952 ZNF280CQ8ND82 737 aa16.51■□□□□ 0.23
NUP188-207ENST00000487952 NKX2-3Q8TAU0 364 aa16.51■□□□□ 0.23
NUP188-207ENST00000487952 IL17RAQ96F46 866 aa16.51■□□□□ 0.23
NUP188-207ENST00000487952 WNK4Q96J92 1243 aa16.51■□□□□ 0.23
NUP188-207ENST00000487952 HHIPL1Q96JK4 782 aa16.51■□□□□ 0.23
NUP188-207ENST00000487952 TCEANC2Q96MN5 208 aa16.51■□□□□ 0.23
NUP188-207ENST00000487952 WDR18Q9BV38 432 aa16.51■□□□□ 0.23
NUP188-207ENST00000487952 LRRC2Q9BYS8 371 aa16.51■□□□□ 0.23
NUP188-207ENST00000487952 IL17RBQ9NRM6 502 aa16.51■□□□□ 0.23
NUP188-207ENST00000487952 OTOFQ9HC10 1997 aa16.51■□□□□ 0.23
NUP188-207ENST00000487952 RAD21O60216 631 aa16.5■□□□□ 0.23
NUP188-207ENST00000487952 TOP1P11387 765 aaKnown RBP16.5■□□□□ 0.23
NUP188-207ENST00000487952 EXOSC10Q01780 885 aaKnown RBP16.5■□□□□ 0.23
NUP188-207ENST00000487952 SPP2Q13103 211 aa16.5■□□□□ 0.23
NUP188-207ENST00000487952 RABEP1Q15276 862 aa16.5■□□□□ 0.23
NUP188-207ENST00000487952 NFXL1Q6ZNB6 911 aa16.5■□□□□ 0.23
NUP188-207ENST00000487952 RASAL3Q86YV0 1011 aa16.5■□□□□ 0.23
NUP188-207ENST00000487952 ENAHQ8N8S7 591 aaPredicted RBP16.5■□□□□ 0.23
NUP188-207ENST00000487952 CNKSR2Q8WXI2 1034 aa16.5■□□□□ 0.23
NUP188-207ENST00000487952 CCDC102AQ96A19 550 aa16.5■□□□□ 0.23
NUP188-207ENST00000487952 KAT14Q9H8E8 782 aa16.5■□□□□ 0.23
NUP188-207ENST00000487952 PDRG1Q9NUG6 133 aa16.5■□□□□ 0.23
NUP188-207ENST00000487952 USP17L10C9JJH3 530 aa16.49■□□□□ 0.23
NUP188-207ENST00000487952 SH2B2O14492 632 aaPredicted RBP16.49■□□□□ 0.23
NUP188-207ENST00000487952 NEK4P51957 841 aa16.49■□□□□ 0.23
NUP188-207ENST00000487952 USP14P54578 494 aa16.49■□□□□ 0.23
NUP188-207ENST00000487952 MKRN3Q13064 507 aaKnown RBP16.49■□□□□ 0.23
NUP188-207ENST00000487952 GRM1Q13255 1194 aa16.49■□□□□ 0.23
NUP188-207ENST00000487952 ZYXQ15942 572 aaKnown RBP16.49■□□□□ 0.23
NUP188-207ENST00000487952 DEFB115Q30KQ5 88 aa16.49■□□□□ 0.23
NUP188-207ENST00000487952 SPRYD7Q5W111 196 aa16.49■□□□□ 0.23
NUP188-207ENST00000487952 Q6ZUG5 572 aa16.49■□□□□ 0.23
NUP188-207ENST00000487952 TMTC2Q8N394 836 aa16.49■□□□□ 0.23
NUP188-207ENST00000487952 ACER1Q8TDN7 264 aa16.49■□□□□ 0.23
NUP188-207ENST00000487952 GOPCQ9HD26 462 aa16.49■□□□□ 0.23
NUP188-207ENST00000487952 TMOD4Q9NZQ9 345 aa16.49■□□□□ 0.23
NUP188-207ENST00000487952 TMX2Q9Y320 296 aa16.49■□□□□ 0.23
NUP188-207ENST00000487952 AFG3L2Q9Y4W6 797 aa16.49■□□□□ 0.23
NUP188-207ENST00000487952 ATAD5Q96QE3 1844 aa16.49■□□□□ 0.23
NUP188-207ENST00000487952 CCDC69A6NI79 296 aa16.48■□□□□ 0.23
NUP188-207ENST00000487952 C19orf81C9J6K1 198 aa16.48■□□□□ 0.23
NUP188-207ENST00000487952 CXCL11O14625 94 aa16.48■□□□□ 0.23
NUP188-207ENST00000487952 IRF6O14896 467 aa16.48■□□□□ 0.23
NUP188-207ENST00000487952 SLC10A3P09131 477 aa16.48■□□□□ 0.23
NUP188-207ENST00000487952 ZBTB48P10074 688 aaPredicted RBP16.48■□□□□ 0.23
NUP188-207ENST00000487952 ECE1P42892 770 aa16.48■□□□□ 0.23
NUP188-207ENST00000487952 SNAPC2Q13487 334 aa16.48■□□□□ 0.23
NUP188-207ENST00000487952 MTMR2Q13614 643 aa16.48■□□□□ 0.23
NUP188-207ENST00000487952 COL9A3Q14050 684 aaPredicted RBP16.48■□□□□ 0.23
NUP188-207ENST00000487952 SEC23AQ15436 765 aa16.48■□□□□ 0.23
NUP188-207ENST00000487952 SYNE3Q6ZMZ3 975 aa16.48■□□□□ 0.23
NUP188-207ENST00000487952 LRRC47Q8N1G4 583 aaKnown RBP16.48■□□□□ 0.23
NUP188-207ENST00000487952 IGDCC4Q8TDY8 1250 aa16.48■□□□□ 0.23
NUP188-207ENST00000487952 ANKS1AQ92625 1134 aa16.48■□□□□ 0.23
NUP188-207ENST00000487952 TMEM47Q9BQJ4 181 aa16.48■□□□□ 0.23
NUP188-207ENST00000487952 KIAA1683Q9H0B3 1180 aa16.48■□□□□ 0.23
NUP188-207ENST00000487952 A0A1W2PRG0 241 aa16.47■□□□□ 0.23
NUP188-207ENST00000487952 RASSF10A6NK89 507 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms