RNA–Protein interactions for RNA: ENST00000487699.1

SATB1-215, Transcript of SATB homeobox 1, humanhuman

TSL 4

Gene SATB1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-215ENST00000487699 ANAPC4Q9UJX5 808 aa11.61□□□□□ -0.55
SATB1-215ENST00000487699 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.61□□□□□ -0.55
SATB1-215ENST00000487699 LOC285556D6RIA3 1793 aa11.61□□□□□ -0.55
SATB1-215ENST00000487699 CCDC171Q6TFL3 1326 aa11.6□□□□□ -0.55
SATB1-215ENST00000487699 C19orf81C9J6K1 198 aa11.6□□□□□ -0.55
SATB1-215ENST00000487699 APPP05067 770 aa11.6□□□□□ -0.55
SATB1-215ENST00000487699 CHMLP26374 656 aa11.6□□□□□ -0.55
SATB1-215ENST00000487699 HOXA7P31268 230 aaPredicted RBP11.6□□□□□ -0.55
SATB1-215ENST00000487699 TDO2P48775 406 aa11.6□□□□□ -0.55
SATB1-215ENST00000487699 PPARAQ07869 468 aa11.6□□□□□ -0.55
SATB1-215ENST00000487699 RAB3GAP1Q15042 981 aa11.6□□□□□ -0.55
SATB1-215ENST00000487699 CWC27Q6UX04 472 aaKnown RBP11.6□□□□□ -0.55
SATB1-215ENST00000487699 TMEM179Q6ZVK1 233 aa11.6□□□□□ -0.55
SATB1-215ENST00000487699 STK11IPQ8N1F8 1099 aa11.6□□□□□ -0.55
SATB1-215ENST00000487699 CCDC17Q96LX7 622 aa11.6□□□□□ -0.55
SATB1-215ENST00000487699 KIAA1683Q9H0B3 1180 aa11.6□□□□□ -0.55
SATB1-215ENST00000487699 CPA4Q9UI42 421 aa11.6□□□□□ -0.55
SATB1-215ENST00000487699 GREB1LQ9C091 1923 aaPredicted RBP11.6□□□□□ -0.55
SATB1-215ENST00000487699 PRDM1O75626 825 aa11.59□□□□□ -0.55
SATB1-215ENST00000487699 SP3Q02447 781 aa11.59□□□□□ -0.55
SATB1-215ENST00000487699 CTDSPL2Q05D32 466 aa11.59□□□□□ -0.55
SATB1-215ENST00000487699 CD99L2Q8TCZ2 262 aa11.59□□□□□ -0.55
SATB1-215ENST00000487699 ARHGAP39Q9C0H5 1083 aa11.59□□□□□ -0.55
SATB1-215ENST00000487699 MCOLN1Q9GZU1 580 aa11.59□□□□□ -0.55
SATB1-215ENST00000487699 NAPBQ9H115 298 aa11.59□□□□□ -0.55
SATB1-215ENST00000487699 ZMYM6O95789 1325 aa11.59□□□□□ -0.55
SATB1-215ENST00000487699 PEX10O60683 326 aa11.58□□□□□ -0.56
SATB1-215ENST00000487699 NOVP48745 357 aa11.58□□□□□ -0.56
SATB1-215ENST00000487699 USP17L2Q6R6M4 530 aa11.58□□□□□ -0.56
SATB1-215ENST00000487699 OTOP1Q7RTM1 612 aa11.58□□□□□ -0.56
SATB1-215ENST00000487699 CTU1Q7Z7A3 348 aaKnown RBP11.58□□□□□ -0.56
SATB1-215ENST00000487699 TNS4Q8IZW8 715 aa11.58□□□□□ -0.56
SATB1-215ENST00000487699 DDRGK1Q96HY6 314 aa11.58□□□□□ -0.56
SATB1-215ENST00000487699 P2RX7Q99572 595 aaKnown RBP11.58□□□□□ -0.56
SATB1-215ENST00000487699 NACAP1Q9BZK3 213 aa11.58□□□□□ -0.56
SATB1-215ENST00000487699 ASCC2Q9H1I8 757 aaPredicted RBP11.58□□□□□ -0.56
SATB1-215ENST00000487699 CABP5Q9NP86 173 aa11.58□□□□□ -0.56
SATB1-215ENST00000487699 TMX2Q9Y320 296 aa11.58□□□□□ -0.56
SATB1-215ENST00000487699 PLIN4Q96Q06 1357 aa11.57□□□□□ -0.56
SATB1-215ENST00000487699 CENPFP49454 3210 aa11.57□□□□□ -0.56
SATB1-215ENST00000487699 HIP1O00291 1037 aa11.57□□□□□ -0.56
SATB1-215ENST00000487699 MPHOSPH10O00566 681 aaKnown RBP11.57□□□□□ -0.56
SATB1-215ENST00000487699 EEF2P13639 858 aaKnown RBP11.57□□□□□ -0.56
SATB1-215ENST00000487699 LACTBP83111 547 aaPredicted RBP11.57□□□□□ -0.56
SATB1-215ENST00000487699 ZYXQ15942 572 aaKnown RBP11.57□□□□□ -0.56
SATB1-215ENST00000487699 CATSPERGQ6ZRH7 1159 aa11.57□□□□□ -0.56
SATB1-215ENST00000487699 NEDD1Q8NHV4 660 aa11.57□□□□□ -0.56
SATB1-215ENST00000487699 CCDC136Q96JN2 1154 aa11.57□□□□□ -0.56
SATB1-215ENST00000487699 PARK7Q99497 189 aaKnown RBP11.57□□□□□ -0.56
SATB1-215ENST00000487699 TXNRD2Q9NNW7 524 aa11.57□□□□□ -0.56
SATB1-215ENST00000487699 IL17RBQ9NRM6 502 aa11.57□□□□□ -0.56
SATB1-215ENST00000487699 ZSWIM8A7E2V4 1837 aa11.57□□□□□ -0.56
SATB1-215ENST00000487699 SGSM2O43147 1006 aa11.56□□□□□ -0.56
SATB1-215ENST00000487699 ORC4O43929 436 aa11.56□□□□□ -0.56
SATB1-215ENST00000487699 CNMDO75829 334 aa11.56□□□□□ -0.56
SATB1-215ENST00000487699 VCAM1P19320 739 aa11.56□□□□□ -0.56
SATB1-215ENST00000487699 PTH1RQ03431 593 aa11.56□□□□□ -0.56
SATB1-215ENST00000487699 ICA1Q05084 483 aa11.56□□□□□ -0.56
SATB1-215ENST00000487699 Q3C1V9 767 aa11.56□□□□□ -0.56
SATB1-215ENST00000487699 FAM47AQ5JRC9 791 aa11.56□□□□□ -0.56
SATB1-215ENST00000487699 TBC1D10CQ8IV04 446 aa11.56□□□□□ -0.56
SATB1-215ENST00000487699 AMOTL1Q8IY63 956 aa11.56□□□□□ -0.56
SATB1-215ENST00000487699 MKL1Q969V6 931 aa11.56□□□□□ -0.56
SATB1-215ENST00000487699 DSCC1Q9BVC3 393 aa11.56□□□□□ -0.56
SATB1-215ENST00000487699 KANSL2Q9H9L4 492 aa11.56□□□□□ -0.56
SATB1-215ENST00000487699 MKNK2Q9HBH9 465 aa11.56□□□□□ -0.56
SATB1-215ENST00000487699 DIAPH3Q9NSV4 1193 aa11.56□□□□□ -0.56
SATB1-215ENST00000487699 NYAP2Q9P242 653 aa11.56□□□□□ -0.56
SATB1-215ENST00000487699 RBPJLQ9UBG7 517 aa11.56□□□□□ -0.56
SATB1-215ENST00000487699 CENPBP07199 599 aaPredicted RBP11.55□□□□□ -0.56
SATB1-215ENST00000487699 USP14P54578 494 aa11.55□□□□□ -0.56
SATB1-215ENST00000487699 HAND2P61296 217 aa11.55□□□□□ -0.56
SATB1-215ENST00000487699 TFAP4Q01664 338 aa11.55□□□□□ -0.56
SATB1-215ENST00000487699 BMP2KLQ5H9B9 411 aa11.55□□□□□ -0.56
SATB1-215ENST00000487699 ERICH6BQ5W0A0 696 aa11.55□□□□□ -0.56
SATB1-215ENST00000487699 CEP95Q96GE4 821 aa11.55□□□□□ -0.56
SATB1-215ENST00000487699 ERO1AQ96HE7 468 aa11.55□□□□□ -0.56
SATB1-215ENST00000487699 ABHD8Q96I13 439 aa11.55□□□□□ -0.56
SATB1-215ENST00000487699 TRIM47Q96LD4 638 aa11.55□□□□□ -0.56
SATB1-215ENST00000487699 VCPKMTQ9H867 229 aa11.55□□□□□ -0.56
SATB1-215ENST00000487699 MTMR4Q9NYA4 1195 aa11.55□□□□□ -0.56
SATB1-215ENST00000487699 TMOD4Q9NZQ9 345 aa11.55□□□□□ -0.56
SATB1-215ENST00000487699 MORF4L1Q9UBU8 362 aa11.55□□□□□ -0.56
SATB1-215ENST00000487699 TAF6LQ9Y6J9 622 aa11.55□□□□□ -0.56
SATB1-215ENST00000487699 BRCA2P51587 3418 aa11.55□□□□□ -0.56
SATB1-215ENST00000487699 USP17L15C9J2P7 530 aa11.54□□□□□ -0.56
SATB1-215ENST00000487699 USP17L13C9JLJ4 530 aa11.54□□□□□ -0.56
SATB1-215ENST00000487699 USP17L11C9JVI0 530 aa11.54□□□□□ -0.56
SATB1-215ENST00000487699 USP17L18D6R9N7 530 aa11.54□□□□□ -0.56
SATB1-215ENST00000487699 USP17L22D6RA61 530 aa11.54□□□□□ -0.56
SATB1-215ENST00000487699 USP17L17D6RBQ6 530 aa11.54□□□□□ -0.56
SATB1-215ENST00000487699 USP17L19D6RCP7 530 aa11.54□□□□□ -0.56
SATB1-215ENST00000487699 USP17L20D6RJB6 530 aa11.54□□□□□ -0.56
SATB1-215ENST00000487699 NMT2O60551 498 aa11.54□□□□□ -0.56
SATB1-215ENST00000487699 HERVK_113P62684 666 aa11.54□□□□□ -0.56
SATB1-215ENST00000487699 USP17L24Q0WX57 530 aa11.54□□□□□ -0.56
SATB1-215ENST00000487699 LBX2Q6XYB7 198 aa11.54□□□□□ -0.56
SATB1-215ENST00000487699 ZNF444Q8N0Y2 327 aaPredicted RBP11.54□□□□□ -0.56
SATB1-215ENST00000487699 ANKRD13CQ8N6S4 541 aa11.54□□□□□ -0.56
SATB1-215ENST00000487699 STAG1Q8WVM7 1258 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms