RNA–Protein interactions for RNA: ENST00000487625.1

USP9X-208, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 2

Gene USP9X, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-208ENST00000487625 ZNF252P-AS1Q0IIN9 211 aa5.75□□□□□ -1.49
USP9X-208ENST00000487625 AAMPQ13685 434 aa5.75□□□□□ -1.49
USP9X-208ENST00000487625 UBXN11Q5T124 520 aa5.75□□□□□ -1.49
USP9X-208ENST00000487625 KCT2Q8NC54 265 aa5.75□□□□□ -1.49
USP9X-208ENST00000487625 TMEM39AQ9NV64 488 aa5.75□□□□□ -1.49
USP9X-208ENST00000487625 SMPD4Q9NXE4 827 aa5.75□□□□□ -1.49
USP9X-208ENST00000487625 GPN3Q9UHW5 284 aaPredicted RBP5.75□□□□□ -1.49
USP9X-208ENST00000487625 ZNF777Q9ULD5 760 aaPredicted RBP5.75□□□□□ -1.49
USP9X-208ENST00000487625 NPR3P17342 541 aa5.74□□□□□ -1.49
USP9X-208ENST00000487625 TACR2P21452 398 aa5.74□□□□□ -1.49
USP9X-208ENST00000487625 ARNTP27540 789 aa5.74□□□□□ -1.49
USP9X-208ENST00000487625 ACVRL1P37023 503 aa5.74□□□□□ -1.49
USP9X-208ENST00000487625 CDR1P51861 262 aa5.74□□□□□ -1.49
USP9X-208ENST00000487625 SNX17Q15036 470 aa5.74□□□□□ -1.49
USP9X-208ENST00000487625 PPP1R13LQ8WUF5 828 aa5.74□□□□□ -1.49
USP9X-208ENST00000487625 ACSBG1Q96GR2 724 aa5.74□□□□□ -1.49
USP9X-208ENST00000487625 FBRSQ9HAH7 460 aa5.74□□□□□ -1.49
USP9X-208ENST00000487625 CCDC87Q9NVE4 849 aa5.74□□□□□ -1.49
USP9X-208ENST00000487625 CYR61O00622 381 aa5.73□□□□□ -1.49
USP9X-208ENST00000487625 EFEMP2O95967 443 aa5.73□□□□□ -1.49
USP9X-208ENST00000487625 VIPR1P32241 457 aa5.73□□□□□ -1.49
USP9X-208ENST00000487625 KIR3DL1P43629 444 aa5.73□□□□□ -1.49
USP9X-208ENST00000487625 PPP2R3AQ06190 1150 aa5.73□□□□□ -1.49
USP9X-208ENST00000487625 EGR3Q06889 387 aa5.73□□□□□ -1.49
USP9X-208ENST00000487625 SLBPQ14493 270 aaKnown RBP eCLIP5.73□□□□□ -1.49
USP9X-208ENST00000487625 ADGRF1Q5T601 910 aa5.73□□□□□ -1.49
USP9X-208ENST00000487625 FERMT3Q86UX7 667 aa5.73□□□□□ -1.49
USP9X-208ENST00000487625 GTF3C2Q8WUA4 911 aaPredicted RBP5.73□□□□□ -1.49
USP9X-208ENST00000487625 EBF1Q9UH73 591 aa5.73□□□□□ -1.49
USP9X-208ENST00000487625 TPP2P29144 1249 aaPredicted RBP5.72□□□□□ -1.49
USP9X-208ENST00000487625 KCNC1P48547 511 aa5.72□□□□□ -1.49
USP9X-208ENST00000487625 SLURP1P55000 103 aa5.72□□□□□ -1.49
USP9X-208ENST00000487625 CPZQ66K79 652 aa5.72□□□□□ -1.49
USP9X-208ENST00000487625 LETMD1Q6P1Q0 360 aa5.72□□□□□ -1.49
USP9X-208ENST00000487625 PWWP2AQ96N64 755 aa5.72□□□□□ -1.49
USP9X-208ENST00000487625 DUSP15Q9H1R2 295 aaPredicted RBP5.72□□□□□ -1.49
USP9X-208ENST00000487625 FFAR3O14843 346 aa5.71□□□□□ -1.5
USP9X-208ENST00000487625 PIWIL2Q8TC59 973 aaKnown RBP5.71□□□□□ -1.5
USP9X-208ENST00000487625 ZNF507Q8TCN5 953 aa5.71□□□□□ -1.5
USP9X-208ENST00000487625 MZB1Q8WU39 189 aa5.71□□□□□ -1.5
USP9X-208ENST00000487625 NOTOA8MTQ0 251 aa5.7□□□□□ -1.5
USP9X-208ENST00000487625 ZNF20P17024 532 aa5.7□□□□□ -1.5
USP9X-208ENST00000487625 HNRNPA0Q13151 305 aaKnown RBP5.7□□□□□ -1.5
USP9X-208ENST00000487625 NKG7Q16617 165 aa5.7□□□□□ -1.5
USP9X-208ENST00000487625 ZNF746Q6NUN9 644 aaPredicted RBP5.7□□□□□ -1.5
USP9X-208ENST00000487625 IGDCC3Q8IVU1 814 aa5.7□□□□□ -1.5
USP9X-208ENST00000487625 SIRT2Q8IXJ6 389 aa5.7□□□□□ -1.5
USP9X-208ENST00000487625 COX4I2Q96KJ9 171 aa5.7□□□□□ -1.5
USP9X-208ENST00000487625 C1QTNF3Q9BXJ4 246 aa5.7□□□□□ -1.5
USP9X-208ENST00000487625 DUSP13Q9UII6 198 aa5.7□□□□□ -1.5
USP9X-208ENST00000487625 PLCB3Q01970 1234 aa5.69□□□□□ -1.5
USP9X-208ENST00000487625 CHRNEQ04844 493 aa5.69□□□□□ -1.5
USP9X-208ENST00000487625 NLRX1Q86UT6 975 aa5.69□□□□□ -1.5
USP9X-208ENST00000487625 MFSD2AQ8NA29 543 aa5.69□□□□□ -1.5
USP9X-208ENST00000487625 DHX38Q92620 1227 aaKnown RBP5.69□□□□□ -1.5
USP9X-208ENST00000487625 BCANQ96GW7 911 aa5.69□□□□□ -1.5
USP9X-208ENST00000487625 ITGB3P05106 788 aa5.68□□□□□ -1.5
USP9X-208ENST00000487625 NME2P22392 152 aa5.68□□□□□ -1.5
USP9X-208ENST00000487625 CAP2P40123 477 aa5.68□□□□□ -1.5
USP9X-208ENST00000487625 SPPL2CQ8IUH8 684 aa5.68□□□□□ -1.5
USP9X-208ENST00000487625 Q96M66 194 aa5.68□□□□□ -1.5
USP9X-208ENST00000487625 GRM2Q14416 872 aa5.67□□□□□ -1.5
USP9X-208ENST00000487625 GRIN3AQ8TCU5 1115 aa5.67□□□□□ -1.5
USP9X-208ENST00000487625 RBM15Q96T37 977 aaKnown RBP eCLIP5.67□□□□□ -1.51e-6■■□□□ 12.5
USP9X-208ENST00000487625 EMILIN2Q9BXX0 1053 aa5.67□□□□□ -1.5
USP9X-208ENST00000487625 PCDHA11Q9Y5I1 949 aa5.67□□□□□ -1.5
USP9X-208ENST00000487625 CYP7A1P22680 504 aa5.66□□□□□ -1.5
USP9X-208ENST00000487625 YBX1P67809 324 aaKnown RBP5.66□□□□□ -1.5
USP9X-208ENST00000487625 SRPK2P78362 688 aaKnown RBP5.66□□□□□ -1.5
USP9X-208ENST00000487625 CRIP3Q6Q6R5 217 aa5.66□□□□□ -1.5
USP9X-208ENST00000487625 ANKS4BQ8N8V4 417 aa5.66□□□□□ -1.5
USP9X-208ENST00000487625 CBX8Q9HC52 389 aa5.66□□□□□ -1.5
USP9X-208ENST00000487625 DUSP10Q9Y6W6 482 aa5.66□□□□□ -1.5
USP9X-208ENST00000487625 FAM13AO94988 1023 aa5.65□□□□□ -1.5
USP9X-208ENST00000487625 ATG7O95352 703 aa5.65□□□□□ -1.5
USP9X-208ENST00000487625 SDHBP21912 280 aa5.65□□□□□ -1.5
USP9X-208ENST00000487625 ORC1Q13415 861 aa5.65□□□□□ -1.5
USP9X-208ENST00000487625 NT5DC1Q5TFE4 455 aa5.65□□□□□ -1.5
USP9X-208ENST00000487625 DTHD1Q6ZMT9 781 aa5.65□□□□□ -1.5
USP9X-208ENST00000487625 CDH24Q86UP0 819 aa5.65□□□□□ -1.5
USP9X-208ENST00000487625 PCED1AQ9H1Q7 454 aa5.65□□□□□ -1.5
USP9X-208ENST00000487625 TRIT1Q9H3H1 467 aaKnown RBP5.65□□□□□ -1.5
USP9X-208ENST00000487625 USP40Q9NVE5 1235 aa5.65□□□□□ -1.5
USP9X-208ENST00000487625 TRAK1Q9UPV9 953 aa5.65□□□□□ -1.5
USP9X-208ENST00000487625 GADD45BO75293 160 aaPredicted RBP5.64□□□□□ -1.51
USP9X-208ENST00000487625 TRIM37O94972 964 aa5.64□□□□□ -1.51
USP9X-208ENST00000487625 CAP1Q01518 475 aa5.64□□□□□ -1.51
USP9X-208ENST00000487625 PRAMEF13Q5VWM6 474 aa5.64□□□□□ -1.51
USP9X-208ENST00000487625 TSPYL5Q86VY4 417 aaPredicted RBP5.64□□□□□ -1.51
USP9X-208ENST00000487625 XAGE3Q8WTP9 111 aa5.64□□□□□ -1.51
USP9X-208ENST00000487625 C8orf49Q96NF6 230 aa5.64□□□□□ -1.51
USP9X-208ENST00000487625 NECAB3Q96P71 396 aaPredicted RBP5.64□□□□□ -1.51
USP9X-208ENST00000487625 PRAMEF27A3QJZ7 478 aa5.63□□□□□ -1.51
USP9X-208ENST00000487625 SLC24A1O60721 1099 aa5.63□□□□□ -1.51
USP9X-208ENST00000487625 CPNE3O75131 537 aaKnown RBP5.63□□□□□ -1.51
USP9X-208ENST00000487625 LTKP29376 864 aa5.63□□□□□ -1.51
USP9X-208ENST00000487625 FCGRTP55899 365 aa5.63□□□□□ -1.51
USP9X-208ENST00000487625 LDHDQ86WU2 507 aa5.63□□□□□ -1.51
USP9X-208ENST00000487625 LINC01599Q8WXQ3 324 aa5.63□□□□□ -1.51
USP9X-208ENST00000487625 CCDC74AQ96AQ1 378 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms