RNA–Protein interactions for RNA: ENST00000487519.5

TFAM-204, Transcript of transcription factor A, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFAM, Length 5,414 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAM-204ENST00000487519 NAP1L3Q99457 506 aaPredicted RBP15.53■□□□□ 0.08
TFAM-204ENST00000487519 SHANK2Q9UPX8 1470 aa15.53■□□□□ 0.08
TFAM-204ENST00000487519 IVLP07476 585 aa15.53■□□□□ 0.08
TFAM-204ENST00000487519 HPDP32754 393 aaPredicted RBP15.53■□□□□ 0.08
TFAM-204ENST00000487519 MAGEA1P43355 309 aa15.53■□□□□ 0.08
TFAM-204ENST00000487519 TUBB4BP68371 445 aa15.53■□□□□ 0.08
TFAM-204ENST00000487519 LRRC24Q50LG9 513 aa15.53■□□□□ 0.08
TFAM-204ENST00000487519 CDAN1Q8IWY9 1227 aa15.53■□□□□ 0.08
TFAM-204ENST00000487519 NACA2Q9H009 215 aa15.53■□□□□ 0.08
TFAM-204ENST00000487519 ALAS1P13196 640 aa15.53■□□□□ 0.08
TFAM-204ENST00000487519 LRMPQ12912 555 aa15.53■□□□□ 0.08
TFAM-204ENST00000487519 LRRC47Q8N1G4 583 aaKnown RBP15.53■□□□□ 0.08
TFAM-204ENST00000487519 PEG3Q9GZU2 1588 aa15.53■□□□□ 0.08
TFAM-204ENST00000487519 GOLGA8HP0CJ92 632 aa15.52■□□□□ 0.08
TFAM-204ENST00000487519 NLRP12P59046 1061 aa15.52■□□□□ 0.08
TFAM-204ENST00000487519 ME3Q16798 604 aa15.52■□□□□ 0.08
TFAM-204ENST00000487519 ARHGAP44Q17R89 818 aa15.52■□□□□ 0.08
TFAM-204ENST00000487519 FAM207AQ9NSI2 230 aaPredicted RBP15.52■□□□□ 0.08
TFAM-204ENST00000487519 PCDHB13Q9Y5F0 798 aa15.52■□□□□ 0.08
TFAM-204ENST00000487519 CSADQ9Y600 493 aa15.52■□□□□ 0.08
TFAM-204ENST00000487519 PZPP20742 1482 aa15.52■□□□□ 0.08
TFAM-204ENST00000487519 EBAG9O00559 213 aa15.52■□□□□ 0.08
TFAM-204ENST00000487519 PDE6AP16499 860 aa15.52■□□□□ 0.08
TFAM-204ENST00000487519 PPARDQ03181 441 aa15.52■□□□□ 0.08
TFAM-204ENST00000487519 IFNL3Q8IZI9 196 aa15.52■□□□□ 0.08
TFAM-204ENST00000487519 BEGAINQ9BUH8 593 aa15.52■□□□□ 0.08
TFAM-204ENST00000487519 NLRC4Q9NPP4 1024 aa15.52■□□□□ 0.08
TFAM-204ENST00000487519 KLHL30Q0D2K2 578 aa15.52■□□□□ 0.07
TFAM-204ENST00000487519 CHURC1Q8WUH1 139 aa15.52■□□□□ 0.07
TFAM-204ENST00000487519 NKIRAS1Q9NYS0 192 aa15.52■□□□□ 0.07
TFAM-204ENST00000487519 TNNI1P19237 187 aa15.52■□□□□ 0.07
TFAM-204ENST00000487519 U2AF2P26368 475 aaKnown RBP eCLIP15.52■□□□□ 0.076e-8■■■■□ 23.6
TFAM-204ENST00000487519 SERTAD1Q9UHV2 236 aa15.52■□□□□ 0.07
TFAM-204ENST00000487519 SH3BP5O60239 455 aa15.51■□□□□ 0.07
TFAM-204ENST00000487519 CEP104O60308 925 aa15.51■□□□□ 0.07
TFAM-204ENST00000487519 HS1BP3Q53T59 392 aa15.51■□□□□ 0.07
TFAM-204ENST00000487519 UBL4BQ8N7F7 174 aa15.51■□□□□ 0.07
TFAM-204ENST00000487519 SECISBP2LQ93073 1101 aaKnown RBP15.51■□□□□ 0.07
TFAM-204ENST00000487519 GTF3C6Q969F1 213 aa15.51■□□□□ 0.07
TFAM-204ENST00000487519 NPC1L1Q9UHC9 1359 aa15.51■□□□□ 0.07
TFAM-204ENST00000487519 PTH1RQ03431 593 aa15.51■□□□□ 0.07
TFAM-204ENST00000487519 PNOCQ13519 176 aa15.51■□□□□ 0.07
TFAM-204ENST00000487519 C2CD5Q86YS7 1000 aa15.51■□□□□ 0.07
TFAM-204ENST00000487519 SAMD15Q9P1V8 674 aa15.51■□□□□ 0.07
TFAM-204ENST00000487519 TMEM2Q9UHN6 1383 aa15.51■□□□□ 0.07
TFAM-204ENST00000487519 C17orf53Q8N3J3 647 aaPredicted RBP15.51■□□□□ 0.07
TFAM-204ENST00000487519 GPATCH11Q8N954 259 aa15.51■□□□□ 0.07
TFAM-204ENST00000487519 KDM2BQ8NHM5 1336 aa15.51■□□□□ 0.07
TFAM-204ENST00000487519 IGSF3O75054 1194 aa15.51■□□□□ 0.07
TFAM-204ENST00000487519 ADD1P35611 737 aaKnown RBP15.51■□□□□ 0.07
TFAM-204ENST00000487519 GPR162Q16538 588 aa15.51■□□□□ 0.07
TFAM-204ENST00000487519 USPL1Q5W0Q7 1092 aa15.51■□□□□ 0.07
TFAM-204ENST00000487519 FAM76AQ8TAV0 307 aa15.51■□□□□ 0.07
TFAM-204ENST00000487519 STK24Q9Y6E0 443 aa15.51■□□□□ 0.07
TFAM-204ENST00000487519 ZNF75DP51815 510 aa15.5■□□□□ 0.07
TFAM-204ENST00000487519 PRR16Q569H4 304 aa15.5■□□□□ 0.07
TFAM-204ENST00000487519 MIER3Q7Z3K6 550 aa15.5■□□□□ 0.07
TFAM-204ENST00000487519 METTL13Q8N6R0 699 aa15.5■□□□□ 0.07
TFAM-204ENST00000487519 ZBTB38Q8NAP3 1195 aaPredicted RBP15.5■□□□□ 0.07
TFAM-204ENST00000487519 ZSCAN10Q96SZ4 725 aaPredicted RBP15.5■□□□□ 0.07
TFAM-204ENST00000487519 SLF1Q9BQI6 1058 aa15.5■□□□□ 0.07
TFAM-204ENST00000487519 ASIC3Q9UHC3 531 aa15.5■□□□□ 0.07
TFAM-204ENST00000487519 M0QZ92 97 aa15.5■□□□□ 0.07
TFAM-204ENST00000487519 ACTN4O43707 911 aaKnown RBP15.5■□□□□ 0.07
TFAM-204ENST00000487519 MTX1Q13505 466 aa15.5■□□□□ 0.07
TFAM-204ENST00000487519 TNFAIP1Q13829 316 aa15.5■□□□□ 0.07
TFAM-204ENST00000487519 FAM47CQ5HY64 1035 aa15.5■□□□□ 0.07
TFAM-204ENST00000487519 MYSM1Q5VVJ2 828 aa15.5■□□□□ 0.07
TFAM-204ENST00000487519 TIGD1Q96MW7 591 aa15.5■□□□□ 0.07
TFAM-204ENST00000487519 NUP58Q9BVL2 599 aa15.5■□□□□ 0.07
TFAM-204ENST00000487519 MYO1AQ9UBC5 1043 aa15.5■□□□□ 0.07
TFAM-204ENST00000487519 TTLL3Q9Y4R7 772 aa15.5■□□□□ 0.07
TFAM-204ENST00000487519 PTPRTO14522 1441 aa15.5■□□□□ 0.07
TFAM-204ENST00000487519 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.5■□□□□ 0.07
TFAM-204ENST00000487519 NBPF11Q86T75 865 aa15.5■□□□□ 0.07
TFAM-204ENST00000487519 MICALL1Q8N3F8 863 aa15.5■□□□□ 0.07
TFAM-204ENST00000487519 RNF169Q8NCN4 708 aa15.5■□□□□ 0.07
TFAM-204ENST00000487519 VIMP08670 466 aaKnown RBP15.5■□□□□ 0.07
TFAM-204ENST00000487519 ALDH3A1P30838 453 aa15.5■□□□□ 0.07
TFAM-204ENST00000487519 CLUL1Q15846 466 aa15.5■□□□□ 0.07
TFAM-204ENST00000487519 HDXQ7Z353 690 aa15.5■□□□□ 0.07
TFAM-204ENST00000487519 KLHL7Q8IXQ5 586 aa15.5■□□□□ 0.07
TFAM-204ENST00000487519 PNMA1Q8ND90 353 aa15.5■□□□□ 0.07
TFAM-204ENST00000487519 SSH3Q8TE77 659 aa15.5■□□□□ 0.07
TFAM-204ENST00000487519 CYP2J2P51589 502 aa15.5■□□□□ 0.07
TFAM-204ENST00000487519 CHRNDQ07001 517 aa15.5■□□□□ 0.07
TFAM-204ENST00000487519 SETDB1Q15047 1291 aa15.5■□□□□ 0.07
TFAM-204ENST00000487519 TNKSO95271 1327 aa15.49■□□□□ 0.07
TFAM-204ENST00000487519 TUBBP07437 444 aa15.49■□□□□ 0.07
TFAM-204ENST00000487519 CARD6Q9BX69 1037 aa15.49■□□□□ 0.07
TFAM-204ENST00000487519 PSTPIP2Q9H939 334 aa15.49■□□□□ 0.07
TFAM-204ENST00000487519 MLXIPQ9HAP2 919 aa15.49■□□□□ 0.07
TFAM-204ENST00000487519 KIAA0232Q92628 1395 aa15.49■□□□□ 0.07
TFAM-204ENST00000487519 DAAM2Q86T65 1068 aa15.49■□□□□ 0.07
TFAM-204ENST00000487519 GPKOWQ92917 476 aaPredicted RBP eCLIP15.49■□□□□ 0.078e-10■□□□□ 8.7
TFAM-204ENST00000487519 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.49■□□□□ 0.07
TFAM-204ENST00000487519 PRPF6O94906 941 aaKnown RBP15.49■□□□□ 0.07
TFAM-204ENST00000487519 BCRP11274 1271 aa15.49■□□□□ 0.07
TFAM-204ENST00000487519 TECP42680 631 aa15.49■□□□□ 0.07
TFAM-204ENST00000487519 BTDP43251 543 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms