RNA–Protein interactions for RNA: ENST00000487084.1

CDHR3-212, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 834 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-212ENST00000487084 ASCC2Q9H1I8 757 aaPredicted RBP26.8■■□□□ 1.88
CDHR3-212ENST00000487084 FMNL1O95466 1100 aaPredicted RBP26.79■■□□□ 1.88
CDHR3-212ENST00000487084 AKR1B1P15121 316 aa26.79■■□□□ 1.88
CDHR3-212ENST00000487084 CCDC129Q6ZRS4 1044 aa26.79■■□□□ 1.88
CDHR3-212ENST00000487084 TMEM179Q6ZVK1 233 aa26.79■■□□□ 1.88
CDHR3-212ENST00000487084 ANKRD13CQ8N6S4 541 aa26.79■■□□□ 1.88
CDHR3-212ENST00000487084 NACAP1Q9BZK3 213 aa26.79■■□□□ 1.88
CDHR3-212ENST00000487084 EMILIN3Q9NT22 766 aa26.79■■□□□ 1.88
CDHR3-212ENST00000487084 ZSWIM8A7E2V4 1837 aa26.79■■□□□ 1.88
CDHR3-212ENST00000487084 PATL2C9JE40 543 aaKnown RBP26.78■■□□□ 1.88
CDHR3-212ENST00000487084 SBK1Q52WX2 424 aa26.78■■□□□ 1.88
CDHR3-212ENST00000487084 CTGFP29279 349 aa26.77■■□□□ 1.88
CDHR3-212ENST00000487084 USP14P54578 494 aa26.77■■□□□ 1.88
CDHR3-212ENST00000487084 IFNL3Q8IZI9 196 aa26.77■■□□□ 1.88
CDHR3-212ENST00000487084 TRIM47Q96LD4 638 aa26.77■■□□□ 1.88
CDHR3-212ENST00000487084 PTCH2Q9Y6C5 1203 aa26.77■■□□□ 1.88
CDHR3-212ENST00000487084 FCGRTP55899 365 aa26.76■■□□□ 1.87
CDHR3-212ENST00000487084 SOX10P56693 466 aa26.76■■□□□ 1.87
CDHR3-212ENST00000487084 CLEC10AQ8IUN9 316 aa26.76■■□□□ 1.87
CDHR3-212ENST00000487084 CCDC17Q96LX7 622 aa26.76■■□□□ 1.87
CDHR3-212ENST00000487084 KIAA1683Q9H0B3 1180 aa26.76■■□□□ 1.87
CDHR3-212ENST00000487084 NAPBQ9H115 298 aa26.76■■□□□ 1.87
CDHR3-212ENST00000487084 OSBPL3Q9H4L5 887 aa26.76■■□□□ 1.87
CDHR3-212ENST00000487084 GNRH1P01148 92 aa26.75■■□□□ 1.87
CDHR3-212ENST00000487084 HOXA7P31268 230 aaPredicted RBP26.75■■□□□ 1.87
CDHR3-212ENST00000487084 MKNK2Q9HBH9 465 aa26.75■■□□□ 1.87
CDHR3-212ENST00000487084 HOXD10P28358 340 aa26.74■■□□□ 1.87
CDHR3-212ENST00000487084 GCLCP48506 637 aaPredicted RBP26.74■■□□□ 1.87
CDHR3-212ENST00000487084 ICA1Q05084 483 aa26.74■■□□□ 1.87
CDHR3-212ENST00000487084 FAM110CQ1W6H9 321 aa26.74■■□□□ 1.87
CDHR3-212ENST00000487084 C12orf42Q96LP6 360 aa26.74■■□□□ 1.87
CDHR3-212ENST00000487084 FAM227BQ96M60 508 aa26.74■■□□□ 1.87
CDHR3-212ENST00000487084 HELLSQ9NRZ9 838 aa26.74■■□□□ 1.87
CDHR3-212ENST00000487084 MYH8P13535 1937 aa26.74■■□□□ 1.87
CDHR3-212ENST00000487084 VCAM1P19320 739 aa26.73■■□□□ 1.87
CDHR3-212ENST00000487084 P2RX7Q99572 595 aaKnown RBP26.73■■□□□ 1.87
CDHR3-212ENST00000487084 ARHGEF10LQ9HCE6 1279 aa26.73■■□□□ 1.87
CDHR3-212ENST00000487084 ROBO3Q96MS0 1386 aa26.72■■□□□ 1.87
CDHR3-212ENST00000487084 A0A0D9SFI3 127 aa26.72■■□□□ 1.87
CDHR3-212ENST00000487084 A0A1W2PRG0 241 aa26.72■■□□□ 1.87
CDHR3-212ENST00000487084 ATP2B2Q01814 1243 aa26.72■■□□□ 1.87
CDHR3-212ENST00000487084 NMIQ13287 307 aaPredicted RBP26.72■■□□□ 1.87
CDHR3-212ENST00000487084 SRRDQ9UH36 339 aa26.72■■□□□ 1.87
CDHR3-212ENST00000487084 MYPNQ86TC9 1320 aa26.71■■□□□ 1.87
CDHR3-212ENST00000487084 PRMT2P55345 433 aa26.71■■□□□ 1.87
CDHR3-212ENST00000487084 HERVK_113P62684 666 aa26.71■■□□□ 1.87
CDHR3-212ENST00000487084 SLC9C1Q4G0N8 1177 aa26.71■■□□□ 1.87
CDHR3-212ENST00000487084 USP17L15C9J2P7 530 aa26.7■■□□□ 1.86
CDHR3-212ENST00000487084 USP17L13C9JLJ4 530 aa26.7■■□□□ 1.86
CDHR3-212ENST00000487084 USP17L11C9JVI0 530 aa26.7■■□□□ 1.86
CDHR3-212ENST00000487084 USP17L18D6R9N7 530 aa26.7■■□□□ 1.86
CDHR3-212ENST00000487084 USP17L22D6RA61 530 aa26.7■■□□□ 1.86
CDHR3-212ENST00000487084 USP17L17D6RBQ6 530 aa26.7■■□□□ 1.86
CDHR3-212ENST00000487084 USP17L19D6RCP7 530 aa26.7■■□□□ 1.86
CDHR3-212ENST00000487084 USP17L20D6RJB6 530 aa26.7■■□□□ 1.86
CDHR3-212ENST00000487084 TNPO2O14787 897 aaKnown RBP26.7■■□□□ 1.86
CDHR3-212ENST00000487084 PRDM1O75626 825 aa26.7■■□□□ 1.86
CDHR3-212ENST00000487084 PDE4AP27815 886 aa26.7■■□□□ 1.86
CDHR3-212ENST00000487084 USP17L24Q0WX57 530 aa26.7■■□□□ 1.86
CDHR3-212ENST00000487084 MCMDC2Q4G0Z9 681 aa26.7■■□□□ 1.86
CDHR3-212ENST00000487084 VPS53Q5VIR6 699 aa26.7■■□□□ 1.86
CDHR3-212ENST00000487084 RAET1EQ8TD07 263 aa26.7■■□□□ 1.86
CDHR3-212ENST00000487084 RPAP3Q9H6T3 665 aaPredicted RBP26.7■■□□□ 1.86
CDHR3-212ENST00000487084 SH2D4AQ9H788 454 aa26.7■■□□□ 1.86
CDHR3-212ENST00000487084 ZNF287Q9HBT7 754 aa26.7■■□□□ 1.86
CDHR3-212ENST00000487084 PEX10O60683 326 aa26.69■■□□□ 1.86
CDHR3-212ENST00000487084 RASA1P20936 1047 aa26.69■■□□□ 1.86
CDHR3-212ENST00000487084 PRKCZQ05513 592 aa26.69■■□□□ 1.86
CDHR3-212ENST00000487084 PAGR1Q9BTK6 254 aa26.69■■□□□ 1.86
CDHR3-212ENST00000487084 SLC3A2P08195 630 aaKnown RBP26.68■■□□□ 1.86
CDHR3-212ENST00000487084 SDSP20132 328 aa26.68■■□□□ 1.86
CDHR3-212ENST00000487084 PPARAQ07869 468 aa26.68■■□□□ 1.86
CDHR3-212ENST00000487084 CATSPERGQ6ZRH7 1159 aa26.68■■□□□ 1.86
CDHR3-212ENST00000487084 TICAM2Q86XR7 235 aa26.68■■□□□ 1.86
CDHR3-212ENST00000487084 KANSL2Q9H9L4 492 aa26.68■■□□□ 1.86
CDHR3-212ENST00000487084 FOXP2O15409 715 aa26.67■■□□□ 1.86
CDHR3-212ENST00000487084 EEF2P13639 858 aaKnown RBP26.67■■□□□ 1.86
CDHR3-212ENST00000487084 NBPF11Q86T75 865 aa26.67■■□□□ 1.86
CDHR3-212ENST00000487084 ZNF589Q86UQ0 364 aaPredicted RBP26.67■■□□□ 1.86
CDHR3-212ENST00000487084 ZNF444Q8N0Y2 327 aaPredicted RBP26.67■■□□□ 1.86
CDHR3-212ENST00000487084 SPICE1Q8N0Z3 855 aa26.67■■□□□ 1.86
CDHR3-212ENST00000487084 SH3TC2Q8TF17 1288 aa26.67■■□□□ 1.86
CDHR3-212ENST00000487084 GTF3C2Q8WUA4 911 aaPredicted RBP26.67■■□□□ 1.86
CDHR3-212ENST00000487084 ARMC5Q96C12 935 aa26.67■■□□□ 1.86
CDHR3-212ENST00000487084 TANGO6Q9C0B7 1094 aa26.67■■□□□ 1.86
CDHR3-212ENST00000487084 TXNRD2Q9NNW7 524 aa26.67■■□□□ 1.86
CDHR3-212ENST00000487084 DIAPH3Q9NSV4 1193 aa26.67■■□□□ 1.86
CDHR3-212ENST00000487084 GABRQQ9UN88 632 aa26.67■■□□□ 1.86
CDHR3-212ENST00000487084 HTTP42858 3142 aa26.66■■□□□ 1.86
CDHR3-212ENST00000487084 RAD21O60216 631 aa26.66■■□□□ 1.86
CDHR3-212ENST00000487084 PDE4BQ07343 736 aa26.66■■□□□ 1.86
CDHR3-212ENST00000487084 SIAH1Q8IUQ4 282 aa26.66■■□□□ 1.86
CDHR3-212ENST00000487084 GPRC5AQ8NFJ5 357 aa26.66■■□□□ 1.86
CDHR3-212ENST00000487084 COA7Q96BR5 231 aa26.66■■□□□ 1.86
CDHR3-212ENST00000487084 MORF4L1Q9UBU8 362 aa26.66■■□□□ 1.86
CDHR3-212ENST00000487084 TMX2Q9Y320 296 aa26.66■■□□□ 1.86
CDHR3-212ENST00000487084 MYCP01106 439 aaPredicted RBP26.65■■□□□ 1.86
CDHR3-212ENST00000487084 KIAA1755Q5JYT7 1200 aa26.65■■□□□ 1.86
CDHR3-212ENST00000487084 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.65■■□□□ 1.86
CDHR3-212ENST00000487084 VCPKMTQ9H867 229 aa26.65■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms