RNA–Protein interactions for RNA: ENST00000486335.1

CCDC142-208, Transcript of coiled-coil domain containing 142, humanhuman

TSL 5

Gene CCDC142, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-208ENST00000486335 TEX11Q8IYF3 940 aa11.33□□□□□ -0.6
CCDC142-208ENST00000486335 C12orf42Q96LP6 360 aa11.33□□□□□ -0.6
CCDC142-208ENST00000486335 TMOD4Q9NZQ9 345 aa11.33□□□□□ -0.6
CCDC142-208ENST00000486335 ZBTB21Q9ULJ3 1066 aa11.33□□□□□ -0.6
CCDC142-208ENST00000486335 ATP11BQ9Y2G3 1177 aa11.33□□□□□ -0.6
CCDC142-208ENST00000486335 MYO9BQ13459 2157 aa11.33□□□□□ -0.6
CCDC142-208ENST00000486335 TNFRSF10AO00220 468 aa11.32□□□□□ -0.6
CCDC142-208ENST00000486335 IPO8O15397 1037 aaKnown RBP11.32□□□□□ -0.6
CCDC142-208ENST00000486335 COBLO75128 1261 aa11.32□□□□□ -0.6
CCDC142-208ENST00000486335 MS4A1P11836 297 aa11.32□□□□□ -0.6
CCDC142-208ENST00000486335 MCAMP43121 646 aa11.32□□□□□ -0.6
CCDC142-208ENST00000486335 TJAP1Q5JTD0 557 aa11.32□□□□□ -0.6
CCDC142-208ENST00000486335 PRAMEF19Q5SWL8 479 aa11.32□□□□□ -0.6
CCDC142-208ENST00000486335 MFSD14CQ5VZR4 134 aa11.32□□□□□ -0.6
CCDC142-208ENST00000486335 ANO1Q5XXA6 986 aa11.32□□□□□ -0.6
CCDC142-208ENST00000486335 LBX2Q6XYB7 198 aa11.32□□□□□ -0.6
CCDC142-208ENST00000486335 FOXP4Q8IVH2 680 aaPredicted RBP11.32□□□□□ -0.6
CCDC142-208ENST00000486335 SPATA5Q8NB90 893 aa11.32□□□□□ -0.6
CCDC142-208ENST00000486335 ACER1Q8TDN7 264 aa11.32□□□□□ -0.6
CCDC142-208ENST00000486335 SMC4Q9NTJ3 1288 aa11.32□□□□□ -0.6
CCDC142-208ENST00000486335 PALD1Q9ULE6 856 aa11.32□□□□□ -0.6
CCDC142-208ENST00000486335 LDHCP07864 332 aa11.31□□□□□ -0.6
CCDC142-208ENST00000486335 ARID4AP29374 1257 aaPredicted RBP11.31□□□□□ -0.6
CCDC142-208ENST00000486335 GUCY1A2P33402 732 aa11.31□□□□□ -0.6
CCDC142-208ENST00000486335 IRX6P78412 446 aaPredicted RBP11.31□□□□□ -0.6
CCDC142-208ENST00000486335 C1orf53Q5VUE5 145 aa11.31□□□□□ -0.6
CCDC142-208ENST00000486335 ZKSCAN2Q63HK3 967 aa11.31□□□□□ -0.6
CCDC142-208ENST00000486335 USP17L2Q6R6M4 530 aa11.31□□□□□ -0.6
CCDC142-208ENST00000486335 MAPKAPK5Q8IW41 473 aa11.31□□□□□ -0.6
CCDC142-208ENST00000486335 TGFBRAP1Q8WUH2 860 aa11.31□□□□□ -0.6
CCDC142-208ENST00000486335 SYMPKQ92797 1274 aaKnown RBP11.31□□□□□ -0.6
CCDC142-208ENST00000486335 DHX36Q9H2U1 1008 aaKnown RBP11.31□□□□□ -0.6
CCDC142-208ENST00000486335 AATFQ9NY61 560 aaKnown RBP eCLIP11.31□□□□□ -0.6
CCDC142-208ENST00000486335 FLT1P17948 1338 aa11.31□□□□□ -0.6
CCDC142-208ENST00000486335 SPDYE16A6NNV3 312 aaPredicted RBP11.3□□□□□ -0.6
CCDC142-208ENST00000486335 MSCO60682 206 aa11.3□□□□□ -0.6
CCDC142-208ENST00000486335 GH2P01242 217 aa11.3□□□□□ -0.6
CCDC142-208ENST00000486335 UBTFL1P0CB47 393 aaPredicted RBP11.3□□□□□ -0.6
CCDC142-208ENST00000486335 CNGA1P29973 690 aa11.3□□□□□ -0.6
CCDC142-208ENST00000486335 ADCYAP1R1P41586 468 aa11.3□□□□□ -0.6
CCDC142-208ENST00000486335 ATP2B2Q01814 1243 aa11.3□□□□□ -0.6
CCDC142-208ENST00000486335 TLE2Q04725 743 aa11.3□□□□□ -0.6
CCDC142-208ENST00000486335 LRRC41Q15345 812 aa11.3□□□□□ -0.6
CCDC142-208ENST00000486335 C20orf194Q5TEA3 1177 aa11.3□□□□□ -0.6
CCDC142-208ENST00000486335 GTF3C2Q8WUA4 911 aaPredicted RBP11.3□□□□□ -0.6
CCDC142-208ENST00000486335 MEIS3Q99687 375 aa11.3□□□□□ -0.6
CCDC142-208ENST00000486335 GINM1Q9NU53 330 aa11.3□□□□□ -0.6
CCDC142-208ENST00000486335 NOB1Q9ULX3 412 aaKnown RBP11.3□□□□□ -0.6
CCDC142-208ENST00000486335 BDP1A6H8Y1 2624 aa11.3□□□□□ -0.6
CCDC142-208ENST00000486335 USP17L15C9J2P7 530 aa11.29□□□□□ -0.6
CCDC142-208ENST00000486335 USP17L13C9JLJ4 530 aa11.29□□□□□ -0.6
CCDC142-208ENST00000486335 USP17L11C9JVI0 530 aa11.29□□□□□ -0.6
CCDC142-208ENST00000486335 USP17L18D6R9N7 530 aa11.29□□□□□ -0.6
CCDC142-208ENST00000486335 USP17L22D6RA61 530 aa11.29□□□□□ -0.6
CCDC142-208ENST00000486335 USP17L17D6RBQ6 530 aa11.29□□□□□ -0.6
CCDC142-208ENST00000486335 USP17L19D6RCP7 530 aa11.29□□□□□ -0.6
CCDC142-208ENST00000486335 USP17L20D6RJB6 530 aa11.29□□□□□ -0.6
CCDC142-208ENST00000486335 VCAM1P19320 739 aa11.29□□□□□ -0.6
CCDC142-208ENST00000486335 GSTO1P78417 241 aa11.29□□□□□ -0.6
CCDC142-208ENST00000486335 USP17L24Q0WX57 530 aa11.29□□□□□ -0.6
CCDC142-208ENST00000486335 MVPQ14764 893 aaKnown RBP11.29□□□□□ -0.6
CCDC142-208ENST00000486335 KIAA1755Q5JYT7 1200 aa11.29□□□□□ -0.6
CCDC142-208ENST00000486335 OLFML2BQ68BL8 750 aa11.29□□□□□ -0.6
CCDC142-208ENST00000486335 TATDN1Q6P1N9 297 aa11.29□□□□□ -0.6
CCDC142-208ENST00000486335 ATF7IPQ6VMQ6 1270 aa11.29□□□□□ -0.6
CCDC142-208ENST00000486335 C16orf59Q7L2K0 433 aa11.29□□□□□ -0.6
CCDC142-208ENST00000486335 FRAT1Q92837 279 aaPredicted RBP11.29□□□□□ -0.6
CCDC142-208ENST00000486335 FERMT2Q96AC1 680 aa11.29□□□□□ -0.6
CCDC142-208ENST00000486335 PRDM5Q9NQX1 630 aaPredicted RBP11.29□□□□□ -0.6
CCDC142-208ENST00000486335 PPP4R2Q9NY27 417 aa11.29□□□□□ -0.6
CCDC142-208ENST00000486335 RAI14Q9P0K7 980 aa11.29□□□□□ -0.6
CCDC142-208ENST00000486335 SMCHD1A6NHR9 2005 aa11.29□□□□□ -0.6
CCDC142-208ENST00000486335 CHD9Q3L8U1 2897 aa11.29□□□□□ -0.6
CCDC142-208ENST00000486335 TMEM265A0A087WTH1 108 aa11.28□□□□□ -0.6
CCDC142-208ENST00000486335 KIAA0355O15063 1070 aa11.28□□□□□ -0.6
CCDC142-208ENST00000486335 SEPT4O43236 478 aa11.28□□□□□ -0.6
CCDC142-208ENST00000486335 DYNLL1P63167 89 aaKnown RBP11.28□□□□□ -0.6
CCDC142-208ENST00000486335 AAMPQ13685 434 aa11.28□□□□□ -0.6
CCDC142-208ENST00000486335 ADGRE1Q14246 886 aa11.28□□□□□ -0.6
CCDC142-208ENST00000486335 ZYXQ15942 572 aaKnown RBP11.28□□□□□ -0.6
CCDC142-208ENST00000486335 FAM47AQ5JRC9 791 aa11.28□□□□□ -0.6
CCDC142-208ENST00000486335 ARRDC4Q8NCT1 418 aa11.28□□□□□ -0.6
CCDC142-208ENST00000486335 MOV10L1Q9BXT6 1211 aaKnown RBP11.28□□□□□ -0.6
CCDC142-208ENST00000486335 SNRKQ9NRH2 765 aa11.28□□□□□ -0.6
CCDC142-208ENST00000486335 PRKAG2Q9UGJ0 569 aa11.28□□□□□ -0.6
CCDC142-208ENST00000486335 SAP30BPQ9UHR5 308 aaKnown RBP11.28□□□□□ -0.6
CCDC142-208ENST00000486335 PHF24Q9UPV7 400 aa11.28□□□□□ -0.6
CCDC142-208ENST00000486335 A0A1W2PRG0 241 aa11.27□□□□□ -0.61
CCDC142-208ENST00000486335 GRXCR1A8MXD5 290 aa11.27□□□□□ -0.61
CCDC142-208ENST00000486335 CYP2E1P05181 493 aaPredicted RBP11.27□□□□□ -0.61
CCDC142-208ENST00000486335 TRIM27P14373 513 aa11.27□□□□□ -0.61
CCDC142-208ENST00000486335 DNAJB2P25686 324 aa11.27□□□□□ -0.61
CCDC142-208ENST00000486335 ADORA2AP29274 412 aa11.27□□□□□ -0.61
CCDC142-208ENST00000486335 HOXD11P31277 338 aaPredicted RBP11.27□□□□□ -0.61
CCDC142-208ENST00000486335 PLA2G5P39877 138 aa11.27□□□□□ -0.61
CCDC142-208ENST00000486335 PBX2P40425 430 aa11.27□□□□□ -0.61
CCDC142-208ENST00000486335 EVX2Q03828 476 aa11.27□□□□□ -0.61
CCDC142-208ENST00000486335 MTX1Q13505 466 aa11.27□□□□□ -0.61
CCDC142-208ENST00000486335 RASIP1Q5U651 963 aa11.27□□□□□ -0.61
CCDC142-208ENST00000486335 CCAR1Q8IX12 1150 aaKnown RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms