RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 USP17L21D6R901 530 aa17.06■□□□□ 0.32
POLR2J3-204ENST00000486319 IFIT3O14879 490 aaKnown RBP17.06■□□□□ 0.32
POLR2J3-204ENST00000486319 JAK2O60674 1132 aa17.06■□□□□ 0.32
POLR2J3-204ENST00000486319 FGRP09769 529 aa17.06■□□□□ 0.32
POLR2J3-204ENST00000486319 MYH1P12882 1939 aa17.06■□□□□ 0.32
POLR2J3-204ENST00000486319 USP5P45974 858 aa17.06■□□□□ 0.32
POLR2J3-204ENST00000486319 IREB2P48200 963 aaKnown RBP17.06■□□□□ 0.32
POLR2J3-204ENST00000486319 MAP3K11Q16584 847 aa17.06■□□□□ 0.32
POLR2J3-204ENST00000486319 LDLRAD1Q5T700 205 aa17.06■□□□□ 0.32
POLR2J3-204ENST00000486319 CDAN1Q8IWY9 1227 aa17.06■□□□□ 0.32
POLR2J3-204ENST00000486319 TMTC2Q8N394 836 aa17.06■□□□□ 0.32
POLR2J3-204ENST00000486319 INCENPQ9NQS7 918 aa17.06■□□□□ 0.32
POLR2J3-204ENST00000486319 PTPDC1A2A3K4 754 aa17.05■□□□□ 0.32
POLR2J3-204ENST00000486319 USP2O75604 605 aaPredicted RBP17.05■□□□□ 0.32
POLR2J3-204ENST00000486319 BTDP43251 543 aa17.05■□□□□ 0.32
POLR2J3-204ENST00000486319 TCP10Q12799 353 aa17.05■□□□□ 0.32
POLR2J3-204ENST00000486319 NFXL1Q6ZNB6 911 aa17.05■□□□□ 0.32
POLR2J3-204ENST00000486319 RASAL3Q86YV0 1011 aa17.05■□□□□ 0.32
POLR2J3-204ENST00000486319 AMOTL1Q8IY63 956 aa17.05■□□□□ 0.32
POLR2J3-204ENST00000486319 SH3RF3Q8TEJ3 882 aaPredicted RBP17.05■□□□□ 0.32
POLR2J3-204ENST00000486319 ZIC5Q96T25 663 aa17.05■□□□□ 0.32
POLR2J3-204ENST00000486319 LY9Q9HBG7 655 aa17.05■□□□□ 0.32
POLR2J3-204ENST00000486319 MYH15Q9Y2K3 1946 aa17.04■□□□□ 0.32
POLR2J3-204ENST00000486319 CCDC69A6NI79 296 aa17.04■□□□□ 0.32
POLR2J3-204ENST00000486319 CTDNEP1O95476 244 aa17.04■□□□□ 0.32
POLR2J3-204ENST00000486319 KIF23Q02241 960 aaPredicted RBP17.04■□□□□ 0.32
POLR2J3-204ENST00000486319 NFIAQ12857 509 aa17.04■□□□□ 0.32
POLR2J3-204ENST00000486319 APOA5Q6Q788 366 aa17.04■□□□□ 0.32
POLR2J3-204ENST00000486319 NKX2-3Q8TAU0 364 aa17.04■□□□□ 0.32
POLR2J3-204ENST00000486319 FAM151AQ8WW52 585 aa17.04■□□□□ 0.32
POLR2J3-204ENST00000486319 HOOK2Q96ED9 719 aa17.04■□□□□ 0.32
POLR2J3-204ENST00000486319 SLC10A4Q96EP9 437 aa17.04■□□□□ 0.32
POLR2J3-204ENST00000486319 NCOA5Q9HCD5 579 aaKnown RBP17.04■□□□□ 0.32
POLR2J3-204ENST00000486319 MCM9Q9NXL9 1143 aa17.04■□□□□ 0.32
POLR2J3-204ENST00000486319 HPS5Q9UPZ3 1129 aa17.04■□□□□ 0.32
POLR2J3-204ENST00000486319 ECM29Q5VYK3 1845 aa17.04■□□□□ 0.32
POLR2J3-204ENST00000486319 SSC5DA1L4H1 1573 aa17.04■□□□□ 0.32
POLR2J3-204ENST00000486319 DDX60LQ5H9U9 1706 aaKnown RBP17.03■□□□□ 0.32
POLR2J3-204ENST00000486319 CPLX1O14810 134 aa17.03■□□□□ 0.32
POLR2J3-204ENST00000486319 FOXN1O15353 648 aa17.03■□□□□ 0.32
POLR2J3-204ENST00000486319 ORC4O43929 436 aa17.03■□□□□ 0.32
POLR2J3-204ENST00000486319 METAP2P50579 478 aaKnown RBP eCLIP17.03■□□□□ 0.32
POLR2J3-204ENST00000486319 PDE4BQ07343 736 aa17.03■□□□□ 0.32
POLR2J3-204ENST00000486319 GSE1Q14687 1217 aa17.03■□□□□ 0.32
POLR2J3-204ENST00000486319 WTAPQ15007 396 aa17.03■□□□□ 0.32
POLR2J3-204ENST00000486319 SYNE3Q6ZMZ3 975 aa17.03■□□□□ 0.32
POLR2J3-204ENST00000486319 DDX11Q96FC9 970 aa17.03■□□□□ 0.32
POLR2J3-204ENST00000486319 UBAC1Q9BSL1 405 aa17.03■□□□□ 0.32
POLR2J3-204ENST00000486319 LMBRD1Q9NUN5 540 aa17.03■□□□□ 0.32
POLR2J3-204ENST00000486319 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.03■□□□□ 0.32
POLR2J3-204ENST00000486319 UNCXA6NJT0 531 aa17.02■□□□□ 0.32
POLR2J3-204ENST00000486319 ZBTB43O43298 467 aa17.02■□□□□ 0.32
POLR2J3-204ENST00000486319 CPLX2Q6PUV4 134 aaKnown RBP17.02■□□□□ 0.32
POLR2J3-204ENST00000486319 STK11IPQ8N1F8 1099 aa17.02■□□□□ 0.32
POLR2J3-204ENST00000486319 IDI2Q9BXS1 227 aa17.02■□□□□ 0.32
POLR2J3-204ENST00000486319 FAM198AQ9UFP1 575 aa17.02■□□□□ 0.32
POLR2J3-204ENST00000486319 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.02■□□□□ 0.32
POLR2J3-204ENST00000486319 SLC12A7Q9Y666 1083 aa17.02■□□□□ 0.32
POLR2J3-204ENST00000486319 CYP2D7A0A087X1C5 515 aa17.01■□□□□ 0.31
POLR2J3-204ENST00000486319 H3BQV1 296 aa17.01■□□□□ 0.31
POLR2J3-204ENST00000486319 DTNBO60941 627 aa17.01■□□□□ 0.31
POLR2J3-204ENST00000486319 PRPF40AO75400 957 aaKnown RBP17.01■□□□□ 0.31
POLR2J3-204ENST00000486319 CDKL5O76039 1030 aa17.01■□□□□ 0.31
POLR2J3-204ENST00000486319 CTCFP49711 727 aaPredicted RBP17.01■□□□□ 0.31
POLR2J3-204ENST00000486319 RCAN1P53805 252 aa17.01■□□□□ 0.31
POLR2J3-204ENST00000486319 IFFO2Q5TF58 517 aa17.01■□□□□ 0.31
POLR2J3-204ENST00000486319 IQCA1Q86XH1 822 aa17.01■□□□□ 0.31
POLR2J3-204ENST00000486319 ANKRD13AQ8IZ07 590 aa17.01■□□□□ 0.31
POLR2J3-204ENST00000486319 CLMNQ96JQ2 1002 aa17.01■□□□□ 0.31
POLR2J3-204ENST00000486319 NID2Q14112 1375 aa17.01■□□□□ 0.31
POLR2J3-204ENST00000486319 ROBO3Q96MS0 1386 aa17.01■□□□□ 0.31
POLR2J3-204ENST00000486319 WDHD1O75717 1129 aaPredicted RBP17.01■□□□□ 0.31
POLR2J3-204ENST00000486319 RHBDL3P58872 404 aa17.01■□□□□ 0.31
POLR2J3-204ENST00000486319 MKRN3Q13064 507 aaKnown RBP17.01■□□□□ 0.31
POLR2J3-204ENST00000486319 KLHL40Q2TBA0 621 aa17.01■□□□□ 0.31
POLR2J3-204ENST00000486319 C12orf60Q5U649 245 aa17.01■□□□□ 0.31
POLR2J3-204ENST00000486319 ZFPM1Q8IX07 1006 aa17.01■□□□□ 0.31
POLR2J3-204ENST00000486319 TEX11Q8IYF3 940 aa17.01■□□□□ 0.31
POLR2J3-204ENST00000486319 REM2Q8IYK8 340 aaPredicted RBP17.01■□□□□ 0.31
POLR2J3-204ENST00000486319 RGS22Q8NE09 1264 aa17.01■□□□□ 0.31
POLR2J3-204ENST00000486319 TGFBRAP1Q8WUH2 860 aa17.01■□□□□ 0.31
POLR2J3-204ENST00000486319 CSRNP1Q96S65 589 aa17.01■□□□□ 0.31
POLR2J3-204ENST00000486319 DDX49Q9Y6V7 483 aaKnown RBP17.01■□□□□ 0.31
POLR2J3-204ENST00000486319 TNKSO95271 1327 aa17■□□□□ 0.31
POLR2J3-204ENST00000486319 CA12O43570 354 aa17■□□□□ 0.31
POLR2J3-204ENST00000486319 RANBP6O60518 1105 aaKnown RBP17■□□□□ 0.31
POLR2J3-204ENST00000486319 ENTPD3O75355 529 aa17■□□□□ 0.31
POLR2J3-204ENST00000486319 PICALMQ13492 652 aa17■□□□□ 0.31
POLR2J3-204ENST00000486319 CSPP1Q1MSJ5 1256 aa17■□□□□ 0.31
POLR2J3-204ENST00000486319 DCAF15Q66K64 600 aa17■□□□□ 0.31
POLR2J3-204ENST00000486319 MIGA2Q7L4E1 593 aa17■□□□□ 0.31
POLR2J3-204ENST00000486319 ZSCAN29Q8IWY8 852 aaPredicted RBP17■□□□□ 0.31
POLR2J3-204ENST00000486319 ZSCAN10Q96SZ4 725 aaPredicted RBP17■□□□□ 0.31
POLR2J3-204ENST00000486319 ZKSCAN3Q9BRR0 538 aa17■□□□□ 0.31
POLR2J3-204ENST00000486319 MYH6P13533 1939 aa16.99■□□□□ 0.31
POLR2J3-204ENST00000486319 GOLGA8AA7E2F4 631 aa16.99■□□□□ 0.31
POLR2J3-204ENST00000486319 MAP3K9P80192 1104 aa16.99■□□□□ 0.31
POLR2J3-204ENST00000486319 SEC23AQ15436 765 aa16.99■□□□□ 0.31
POLR2J3-204ENST00000486319 SPRYD7Q5W111 196 aa16.99■□□□□ 0.31
POLR2J3-204ENST00000486319 MICU3Q86XE3 530 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms